RNA–Protein interactions for RNA: ENST00000484806.1

SFI1-223, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-223	ENST00000484806	KIAA1210	Q9ULL0	1709 aa		11.44	□□□□□ -0.58
SFI1-223	ENST00000484806	ZNF142	P52746	1687 aa	Predicted RBP	11.44	□□□□□ -0.58
SFI1-223	ENST00000484806	CEBPA	P49715	358 aa	Predicted RBP	11.44	□□□□□ -0.58
SFI1-223	ENST00000484806	HDGF	P51858	240 aa	Known RBP	11.44	□□□□□ -0.58
SFI1-223	ENST00000484806	KDM2A	Q9Y2K7	1162 aa		11.44	□□□□□ -0.58
SFI1-223	ENST00000484806	NEXMIF	Q5QGS0	1516 aa		11.44	□□□□□ -0.58
SFI1-223	ENST00000484806	A2ML1	A8K2U0	1454 aa		11.44	□□□□□ -0.58
SFI1-223	ENST00000484806	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.43	□□□□□ -0.58
SFI1-223	ENST00000484806	VGF	O15240	615 aa	Predicted RBP	11.43	□□□□□ -0.58
SFI1-223	ENST00000484806	PLPPR3	Q6T4P5	718 aa		11.43	□□□□□ -0.58
SFI1-223	ENST00000484806	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
SFI1-223	ENST00000484806	LAMC1	P11047	1609 aa		11.42	□□□□□ -0.58
SFI1-223	ENST00000484806	TRPM1	Q7Z4N2	1603 aa		11.42	□□□□□ -0.58
SFI1-223	ENST00000484806	ZFYVE9	O95405	1425 aa		11.42	□□□□□ -0.58
SFI1-223	ENST00000484806	NRXN1	Q9ULB1	1477 aa		11.41	□□□□□ -0.58
SFI1-223	ENST00000484806	RIMS2	Q9UQ26	1411 aa		11.41	□□□□□ -0.58
SFI1-223	ENST00000484806	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.4	□□□□□ -0.58
SFI1-223	ENST00000484806	ROCK2	O75116	1388 aa	Known RBP	11.4	□□□□□ -0.59
SFI1-223	ENST00000484806	PIK3C2G	O75747	1445 aa		11.38	□□□□□ -0.59
SFI1-223	ENST00000484806	NBPF8	Q3BBV2	869 aa		11.38	□□□□□ -0.59
SFI1-223	ENST00000484806	EID1	Q9Y6B2	187 aa		11.38	□□□□□ -0.59
SFI1-223	ENST00000484806	SLIT1	O75093	1534 aa		11.38	□□□□□ -0.59
SFI1-223	ENST00000484806	TMEM2	Q9UHN6	1383 aa		11.38	□□□□□ -0.59
SFI1-223	ENST00000484806	GPRASP1	Q5JY77	1395 aa		11.37	□□□□□ -0.59
SFI1-223	ENST00000484806	SETBP1	Q9Y6X0	1596 aa		11.37	□□□□□ -0.59
SFI1-223	ENST00000484806	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
SFI1-223	ENST00000484806	CARD11	Q9BXL7	1154 aa		11.36	□□□□□ -0.59
SFI1-223	ENST00000484806	ARHGAP23	Q9P227	1491 aa		11.36	□□□□□ -0.59
SFI1-223	ENST00000484806	ADGRF5	Q8IZF2	1346 aa		11.35	□□□□□ -0.59
SFI1-223	ENST00000484806	EIF3A	Q14152	1382 aa	Known RBP	11.35	□□□□□ -0.59
SFI1-223	ENST00000484806	SCAF11	Q99590	1463 aa	Known RBP	11.34	□□□□□ -0.59
SFI1-223	ENST00000484806	DIP2A	Q14689	1571 aa		11.33	□□□□□ -0.6
SFI1-223	ENST00000484806	USP47	Q96K76	1375 aa		11.33	□□□□□ -0.6
SFI1-223	ENST00000484806	PLEKHG1	Q9ULL1	1385 aa		11.33	□□□□□ -0.6
SFI1-223	ENST00000484806	KDM4F	A0A1W2PPD8	638 aa		11.33	□□□□□ -0.6
SFI1-223	ENST00000484806	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.33	□□□□□ -0.6
SFI1-223	ENST00000484806	POLR1A	O95602	1720 aa	Predicted RBP	11.32	□□□□□ -0.6
SFI1-223	ENST00000484806	C14orf93	Q9H972	538 aa	Known RBP	11.32	□□□□□ -0.6
SFI1-223	ENST00000484806	IQGAP1	P46940	1657 aa		11.32	□□□□□ -0.6
SFI1-223	ENST00000484806	SLC24A1	O60721	1099 aa		11.31	□□□□□ -0.6
SFI1-223	ENST00000484806	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.31	□□□□□ -0.6
SFI1-223	ENST00000484806	TXNDC2	Q86VQ3	553 aa		11.31	□□□□□ -0.6
SFI1-223	ENST00000484806	BCAN	Q96GW7	911 aa		11.31	□□□□□ -0.6
SFI1-223	ENST00000484806	ALK	Q9UM73	1620 aa		11.31	□□□□□ -0.6
SFI1-223	ENST00000484806	CFAP70	Q5T0N1	1121 aa		11.3	□□□□□ -0.6
SFI1-223	ENST00000484806	ANKLE2	Q86XL3	938 aa		11.3	□□□□□ -0.6
SFI1-223	ENST00000484806	ADGRB1	O14514	1584 aa		11.29	□□□□□ -0.6
SFI1-223	ENST00000484806	NRXN3	Q9Y4C0	1643 aa		11.29	□□□□□ -0.6
SFI1-223	ENST00000484806	HSPA5	P11021	654 aa	Known RBP	11.29	□□□□□ -0.6
SFI1-223	ENST00000484806	SETD1A	O15047	1707 aa	Known RBP	11.29	□□□□□ -0.6
SFI1-223	ENST00000484806	NBPF1	Q3BBV0	1214 aa		11.28	□□□□□ -0.6
SFI1-223	ENST00000484806	KNDC1	Q76NI1	1749 aa		11.27	□□□□□ -0.61
SFI1-223	ENST00000484806	LTK	P29376	864 aa		11.26	□□□□□ -0.61
SFI1-223	ENST00000484806	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.26	□□□□□ -0.61
SFI1-223	ENST00000484806	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.26	□□□□□ -0.61
SFI1-223	ENST00000484806	MED14	O60244	1454 aa		11.25	□□□□□ -0.61
SFI1-223	ENST00000484806	ASXL1	Q8IXJ9	1541 aa		11.25	□□□□□ -0.61
SFI1-223	ENST00000484806	DLC1	Q96QB1	1528 aa		11.25	□□□□□ -0.61
SFI1-223	ENST00000484806	LRPPRC	P42704	1394 aa	Known RBP	11.25	□□□□□ -0.61
SFI1-223	ENST00000484806	PIK3R4	Q99570	1358 aa		11.25	□□□□□ -0.61
SFI1-223	ENST00000484806	NPHP4	O75161	1426 aa	Predicted RBP	11.25	□□□□□ -0.61
SFI1-223	ENST00000484806	TBX22	Q9Y458	520 aa		11.24	□□□□□ -0.61
SFI1-223	ENST00000484806	SBNO2	Q9Y2G9	1366 aa		11.24	□□□□□ -0.61
SFI1-223	ENST00000484806	ADAMTS13	Q76LX8	1427 aa		11.24	□□□□□ -0.61
SFI1-223	ENST00000484806	LMTK3	Q96Q04	1460 aa		11.24	□□□□□ -0.61
SFI1-223	ENST00000484806	ST20-MTHFS	A0A0A6YYL1	179 aa		11.23	□□□□□ -0.61
SFI1-223	ENST00000484806	CDCA8	Q53HL2	280 aa		11.23	□□□□□ -0.61
SFI1-223	ENST00000484806	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.23	□□□□□ -0.61
SFI1-223	ENST00000484806	CPS1	P31327	1500 aa		11.23	□□□□□ -0.61
SFI1-223	ENST00000484806	QRICH2	Q9H0J4	1663 aa		11.23	□□□□□ -0.61
SFI1-223	ENST00000484806	TECPR2	O15040	1411 aa		11.22	□□□□□ -0.61
SFI1-223	ENST00000484806	TMF1	P82094	1093 aa		11.22	□□□□□ -0.61
SFI1-223	ENST00000484806	TMEM132E	Q6IEE7	984 aa		11.22	□□□□□ -0.61
SFI1-223	ENST00000484806	ABCC11	Q96J66	1382 aa		11.22	□□□□□ -0.61
SFI1-223	ENST00000484806	TRAK1	Q9UPV9	953 aa		11.22	□□□□□ -0.61
SFI1-223	ENST00000484806	PTCH1	Q13635	1447 aa		11.2	□□□□□ -0.62
SFI1-223	ENST00000484806	FAM135B	Q49AJ0	1406 aa		11.2	□□□□□ -0.62
SFI1-223	ENST00000484806	MET	P08581	1390 aa		11.2	□□□□□ -0.62
SFI1-223	ENST00000484806	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.2	□□□□□ -0.62
SFI1-223	ENST00000484806	POGK	Q9P215	609 aa		11.2	□□□□□ -0.62
SFI1-223	ENST00000484806	STK26	Q9P289	416 aa		11.2	□□□□□ -0.62
SFI1-223	ENST00000484806	CHD2	O14647	1828 aa	Known RBP	11.19	□□□□□ -0.62
SFI1-223	ENST00000484806	XRN1	Q8IZH2	1706 aa	Known RBP	11.19	□□□□□ -0.62
SFI1-223	ENST00000484806	SIRT1	Q96EB6	747 aa		11.19	□□□□□ -0.62
SFI1-223	ENST00000484806	SLC26A8	Q96RN1	970 aa		11.19	□□□□□ -0.62
SFI1-223	ENST00000484806	CCDC7	Q96M83	1385 aa		11.18	□□□□□ -0.62
SFI1-223	ENST00000484806	NCKAP5L	Q9HCH0	1330 aa		11.18	□□□□□ -0.62
SFI1-223	ENST00000484806	TESK2	Q96S53	571 aa		11.17	□□□□□ -0.62
SFI1-223	ENST00000484806	NWD1	Q149M9	1564 aa		11.16	□□□□□ -0.62
SFI1-223	ENST00000484806	EVC2	Q86UK5	1308 aa		11.16	□□□□□ -0.62
SFI1-223	ENST00000484806	HSPA2	P54652	639 aa		11.16	□□□□□ -0.62
SFI1-223	ENST00000484806	PRAM1	Q96QH2	718 aa		11.16	□□□□□ -0.62
SFI1-223	ENST00000484806	DMRT2	Q9Y5R5	561 aa		11.16	□□□□□ -0.62
SFI1-223	ENST00000484806	KIF7	Q2M1P5	1343 aa		11.15	□□□□□ -0.62
SFI1-223	ENST00000484806	WASHC2A	Q641Q2	1341 aa		11.15	□□□□□ -0.62
SFI1-223	ENST00000484806	NKTR	P30414	1462 aa	Known RBP	11.15	□□□□□ -0.62
SFI1-223	ENST00000484806	AMOTL2	Q9Y2J4	779 aa		11.15	□□□□□ -0.62
SFI1-223	ENST00000484806	PTPRU	Q92729	1446 aa		11.15	□□□□□ -0.62
SFI1-223	ENST00000484806	STRC	Q7RTU9	1775 aa		11.15	□□□□□ -0.62
SFI1-223	ENST00000484806	PUS7	Q96PZ0	661 aa	Known RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms