RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 RBM33Q96EV2 1170 aaKnown RBP13.73□□□□□ -0.21
DDX39B-221ENST00000484566 CEP162Q5TB80 1403 aa13.73□□□□□ -0.21
DDX39B-221ENST00000484566 ZNF772Q68DY9 489 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-221ENST00000484566 CAMSAP2Q08AD1 1489 aa13.72□□□□□ -0.21
DDX39B-221ENST00000484566 ZC3H13Q5T200 1668 aaKnown RBP13.72□□□□□ -0.21
DDX39B-221ENST00000484566 XIRP1Q702N8 1843 aaKnown RBP13.71□□□□□ -0.21
DDX39B-221ENST00000484566 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
DDX39B-221ENST00000484566 RXRBP28702 533 aa13.7□□□□□ -0.22
DDX39B-221ENST00000484566 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
DDX39B-221ENST00000484566 CDK12Q9NYV4 1490 aaPredicted RBP13.69□□□□□ -0.22
DDX39B-221ENST00000484566 MIER1Q8N108 512 aa13.69□□□□□ -0.22
DDX39B-221ENST00000484566 ABCC3O15438 1527 aa13.67□□□□□ -0.22
DDX39B-221ENST00000484566 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
DDX39B-221ENST00000484566 ARHGEF5Q12774 1597 aa13.66□□□□□ -0.22
DDX39B-221ENST00000484566 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
DDX39B-221ENST00000484566 NCOA2Q15596 1464 aa13.66□□□□□ -0.22
DDX39B-221ENST00000484566 SCAF11Q99590 1463 aaKnown RBP13.66□□□□□ -0.22
DDX39B-221ENST00000484566 TSPY4P0CV99 314 aa13.65□□□□□ -0.22
DDX39B-221ENST00000484566 TSPY10P0CW01 314 aa13.65□□□□□ -0.22
DDX39B-221ENST00000484566 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
DDX39B-221ENST00000484566 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
DDX39B-221ENST00000484566 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
DDX39B-221ENST00000484566 POTEHQ6S545 545 aa13.64□□□□□ -0.23
DDX39B-221ENST00000484566 CFAP65Q6ZU64 1925 aaKnown RBP13.63□□□□□ -0.23
DDX39B-221ENST00000484566 CEP152O94986 1710 aa13.62□□□□□ -0.23
DDX39B-221ENST00000484566 JCADQ9P266 1359 aa13.62□□□□□ -0.23
DDX39B-221ENST00000484566 MAST1Q9Y2H9 1570 aa13.62□□□□□ -0.23
DDX39B-221ENST00000484566 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
DDX39B-221ENST00000484566 SLIT1O75093 1534 aa13.6□□□□□ -0.23
DDX39B-221ENST00000484566 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
DDX39B-221ENST00000484566 PHLPP1O60346 1717 aa13.59□□□□□ -0.23
DDX39B-221ENST00000484566 EID1Q9Y6B2 187 aa13.59□□□□□ -0.23
DDX39B-221ENST00000484566 LRP6O75581 1613 aa13.59□□□□□ -0.23
DDX39B-221ENST00000484566 MROH1Q8NDA8 1641 aa13.59□□□□□ -0.23
DDX39B-221ENST00000484566 ARHGAP23Q9P227 1491 aa13.59□□□□□ -0.23
DDX39B-221ENST00000484566 VASPP50552 380 aaPredicted RBP13.58□□□□□ -0.24
DDX39B-221ENST00000484566 TXNDC2Q86VQ3 553 aa13.58□□□□□ -0.24
DDX39B-221ENST00000484566 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
DDX39B-221ENST00000484566 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
DDX39B-221ENST00000484566 LRP5O75197 1615 aa13.57□□□□□ -0.24
DDX39B-221ENST00000484566 LRRC9Q6ZRR7 1453 aa13.56□□□□□ -0.24
DDX39B-221ENST00000484566 LTKP29376 864 aa13.56□□□□□ -0.24
DDX39B-221ENST00000484566 DUOX2Q9NRD8 1548 aa13.55□□□□□ -0.24
DDX39B-221ENST00000484566 NUTM2BA6NNL0 878 aaPredicted RBP13.55□□□□□ -0.24
DDX39B-221ENST00000484566 NUTM2EB1AL46 878 aaPredicted RBP13.55□□□□□ -0.24
DDX39B-221ENST00000484566 NUTM2DQ5VT03 806 aaPredicted RBP13.55□□□□□ -0.24
DDX39B-221ENST00000484566 NUTM2AQ8IVF1 878 aaPredicted RBP13.55□□□□□ -0.24
DDX39B-221ENST00000484566 SPATA31A6Q5VVP1 1343 aa13.55□□□□□ -0.24
DDX39B-221ENST00000484566 EP400Q96L91 3159 aa13.55□□□□□ -0.24
DDX39B-221ENST00000484566 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
DDX39B-221ENST00000484566 TMEM94Q12767 1356 aa13.54□□□□□ -0.24
DDX39B-221ENST00000484566 ARHGAP31Q2M1Z3 1444 aa13.54□□□□□ -0.24
DDX39B-221ENST00000484566 PIK3C2BO00750 1634 aa13.53□□□□□ -0.24
DDX39B-221ENST00000484566 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-221ENST00000484566 TMEM2Q9UHN6 1383 aa13.53□□□□□ -0.24
DDX39B-221ENST00000484566 RGS12O14924 1447 aa13.53□□□□□ -0.24
DDX39B-221ENST00000484566 MAP3K1Q13233 1512 aa13.52□□□□□ -0.25
DDX39B-221ENST00000484566 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
DDX39B-221ENST00000484566 EFCAB6Q5THR3 1501 aa13.51□□□□□ -0.25
DDX39B-221ENST00000484566 NKTRP30414 1462 aaKnown RBP13.5□□□□□ -0.25
DDX39B-221ENST00000484566 ERBINQ96RT1 1412 aa13.5□□□□□ -0.25
DDX39B-221ENST00000484566 KCNA6P17658 529 aa13.5□□□□□ -0.25
DDX39B-221ENST00000484566 YY1P25490 414 aa13.5□□□□□ -0.25
DDX39B-221ENST00000484566 MYOM3Q5VTT5 1437 aa13.49□□□□□ -0.25
DDX39B-221ENST00000484566 MSH6P52701 1360 aa13.49□□□□□ -0.25
DDX39B-221ENST00000484566 ATAD2Q6PL18 1390 aa13.49□□□□□ -0.25
DDX39B-221ENST00000484566 KIF15Q9NS87 1388 aa13.49□□□□□ -0.25
DDX39B-221ENST00000484566 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-221ENST00000484566 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
DDX39B-221ENST00000484566 COL16A1Q07092 1604 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-221ENST00000484566 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
DDX39B-221ENST00000484566 KANK1Q14678 1352 aa13.48□□□□□ -0.25
DDX39B-221ENST00000484566 RBM6P78332 1123 aaKnown RBP13.48□□□□□ -0.25
DDX39B-221ENST00000484566 FGD6Q6ZV73 1430 aa13.47□□□□□ -0.25
DDX39B-221ENST00000484566 CROCC2H7BZ55 1655 aa13.47□□□□□ -0.25
DDX39B-221ENST00000484566 AFF2P51816 1311 aa13.45□□□□□ -0.26
DDX39B-221ENST00000484566 ADGRB3O60242 1522 aa13.45□□□□□ -0.26
DDX39B-221ENST00000484566 TET3O43151 1660 aa13.45□□□□□ -0.26
DDX39B-221ENST00000484566 SHPRHQ149N8 1683 aa13.45□□□□□ -0.26
DDX39B-221ENST00000484566 CCDC125Q86Z20 511 aa13.45□□□□□ -0.26
DDX39B-221ENST00000484566 SLC26A8Q96RN1 970 aa13.45□□□□□ -0.26
DDX39B-221ENST00000484566 QTRT2Q9H974 415 aaKnown RBP13.45□□□□□ -0.26
DDX39B-221ENST00000484566 BCANQ96GW7 911 aa13.44□□□□□ -0.26
DDX39B-221ENST00000484566 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
DDX39B-221ENST00000484566 SLAIN2Q9P270 581 aa13.43□□□□□ -0.26
DDX39B-221ENST00000484566 LMTK2Q8IWU2 1503 aa13.43□□□□□ -0.26
DDX39B-221ENST00000484566 HAX1O00165 279 aa13.42□□□□□ -0.26
DDX39B-221ENST00000484566 RRP7BPQ9NSQ0 103 aa13.42□□□□□ -0.26
DDX39B-221ENST00000484566 IDI1Q13907 227 aa13.41□□□□□ -0.26
DDX39B-221ENST00000484566 ABCC5O15440 1437 aa13.39□□□□□ -0.27
DDX39B-221ENST00000484566 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
DDX39B-221ENST00000484566 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
DDX39B-221ENST00000484566 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
DDX39B-221ENST00000484566 NOS1P29475 1434 aa13.39□□□□□ -0.27
DDX39B-221ENST00000484566 PPP1R15AO75807 674 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-221ENST00000484566 C14orf37Q86TY3 774 aa13.38□□□□□ -0.27
DDX39B-221ENST00000484566 SLC52A1Q9NWF4 448 aa13.38□□□□□ -0.27
DDX39B-221ENST00000484566 DAPK1P53355 1430 aa13.38□□□□□ -0.27
DDX39B-221ENST00000484566 ANKRD30AQ9BXX3 1397 aa13.37□□□□□ -0.27
DDX39B-221ENST00000484566 PLEKHG1Q9ULL1 1385 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms