RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ERVK-7P63135 1459 aa19.59■□□□□ 0.73
CLK3-204ENST00000483723 ADGRF5Q8IZF2 1346 aa19.58■□□□□ 0.73
CLK3-204ENST00000483723 IQGAP1P46940 1657 aa19.57■□□□□ 0.72
CLK3-204ENST00000483723 SPATA31D1Q6ZQQ2 1576 aa19.57■□□□□ 0.72
CLK3-204ENST00000483723 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
CLK3-204ENST00000483723 ANP32CO43423 234 aa19.55■□□□□ 0.72
CLK3-204ENST00000483723 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
CLK3-204ENST00000483723 FBXO31Q5XUX0 539 aaPredicted RBP19.55■□□□□ 0.72
CLK3-204ENST00000483723 TMEM131LA2VDJ0 1609 aa19.55■□□□□ 0.72
CLK3-204ENST00000483723 TESK2Q96S53 571 aa19.54■□□□□ 0.72
CLK3-204ENST00000483723 NEXMIFQ5QGS0 1516 aa19.53■□□□□ 0.72
CLK3-204ENST00000483723 ZFYVE9O95405 1425 aa19.53■□□□□ 0.72
CLK3-204ENST00000483723 MLECQ14165 292 aa19.53■□□□□ 0.72
CLK3-204ENST00000483723 SCAF11Q99590 1463 aaKnown RBP19.53■□□□□ 0.72
CLK3-204ENST00000483723 CCER2I3L3R5 266 aa19.52■□□□□ 0.72
CLK3-204ENST00000483723 PIK3C2GO75747 1445 aa19.52■□□□□ 0.71
CLK3-204ENST00000483723 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
CLK3-204ENST00000483723 ZMYM3Q14202 1370 aa19.51■□□□□ 0.71
CLK3-204ENST00000483723 SETBP1Q9Y6X0 1596 aa19.51■□□□□ 0.71
CLK3-204ENST00000483723 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
CLK3-204ENST00000483723 MYO5BQ9ULV0 1848 aa19.5■□□□□ 0.71
CLK3-204ENST00000483723 VGFO15240 615 aaPredicted RBP19.49■□□□□ 0.71
CLK3-204ENST00000483723 ESF1Q9H501 851 aaKnown RBP19.46■□□□□ 0.71
CLK3-204ENST00000483723 ADGRB1O14514 1584 aa19.44■□□□□ 0.7
CLK3-204ENST00000483723 EIF3AQ14152 1382 aaKnown RBP19.43■□□□□ 0.7
CLK3-204ENST00000483723 TMF1P82094 1093 aa19.42■□□□□ 0.7
CLK3-204ENST00000483723 DISP3Q9P2K9 1392 aa19.42■□□□□ 0.7
CLK3-204ENST00000483723 A2ML1A8K2U0 1454 aa19.42■□□□□ 0.7
CLK3-204ENST00000483723 MYO3AQ8NEV4 1616 aa19.42■□□□□ 0.7
CLK3-204ENST00000483723 SLC24A1O60721 1099 aa19.4■□□□□ 0.7
CLK3-204ENST00000483723 PRKRIP1Q9H875 184 aaPredicted RBP19.4■□□□□ 0.7
CLK3-204ENST00000483723 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.7
CLK3-204ENST00000483723 KDM5AP29375 1690 aaKnown RBP19.39■□□□□ 0.69
CLK3-204ENST00000483723 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
CLK3-204ENST00000483723 TNRQ92752 1358 aa19.38■□□□□ 0.69
CLK3-204ENST00000483723 SBNO2Q9Y2G9 1366 aa19.38■□□□□ 0.69
CLK3-204ENST00000483723 YTHDC1Q96MU7 727 aaKnown RBP19.37■□□□□ 0.69
CLK3-204ENST00000483723 NUTM2DQ5VT03 806 aaPredicted RBP19.36■□□□□ 0.69
CLK3-204ENST00000483723 STAG3Q9UJ98 1225 aa19.36■□□□□ 0.69
CLK3-204ENST00000483723 CDCA8Q53HL2 280 aa19.35■□□□□ 0.69
CLK3-204ENST00000483723 FER1L4A9Z1Z3 1794 aa19.34■□□□□ 0.69
CLK3-204ENST00000483723 C3P01024 1663 aa19.33■□□□□ 0.69
CLK3-204ENST00000483723 RIMS2Q9UQ26 1411 aa19.33■□□□□ 0.69
CLK3-204ENST00000483723 TMEM132EQ6IEE7 984 aa19.33■□□□□ 0.68
CLK3-204ENST00000483723 PER1O15534 1290 aaPredicted RBP19.32■□□□□ 0.68
CLK3-204ENST00000483723 ASXL1Q8IXJ9 1541 aa19.32■□□□□ 0.68
CLK3-204ENST00000483723 ALKQ9UM73 1620 aa19.31■□□□□ 0.68
CLK3-204ENST00000483723 CENPJQ9HC77 1338 aaPredicted RBP19.3■□□□□ 0.68
CLK3-204ENST00000483723 NLRP1Q9C000 1473 aa19.3■□□□□ 0.68
CLK3-204ENST00000483723 UBR1Q8IWV7 1749 aa19.3■□□□□ 0.68
CLK3-204ENST00000483723 TRAK1Q9UPV9 953 aa19.3■□□□□ 0.68
CLK3-204ENST00000483723 ARHGEF28Q8N1W1 1705 aaKnown RBP19.3■□□□□ 0.68
CLK3-204ENST00000483723 KDM4FA0A1W2PPD8 638 aa19.29■□□□□ 0.68
CLK3-204ENST00000483723 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLK3-204ENST00000483723 KTN1Q86UP2 1357 aaKnown RBP19.28■□□□□ 0.68
CLK3-204ENST00000483723 QRICH2Q9H0J4 1663 aa19.27■□□□□ 0.68
CLK3-204ENST00000483723 CEBPAP49715 358 aaPredicted RBP19.27■□□□□ 0.68
CLK3-204ENST00000483723 SETD1AO15047 1707 aaKnown RBP19.26■□□□□ 0.67
CLK3-204ENST00000483723 HDGFP51858 240 aaKnown RBP19.26■□□□□ 0.67
CLK3-204ENST00000483723 PANK3Q9H999 370 aa19.26■□□□□ 0.67
CLK3-204ENST00000483723 MYOM1P52179 1685 aa19.25■□□□□ 0.67
CLK3-204ENST00000483723 TMEM2Q9UHN6 1383 aa19.25■□□□□ 0.67
CLK3-204ENST00000483723 CCDC184Q52MB2 194 aa19.24■□□□□ 0.67
CLK3-204ENST00000483723 PUS7Q96PZ0 661 aaKnown RBP19.24■□□□□ 0.67
CLK3-204ENST00000483723 YTHDC2Q9H6S0 1430 aaKnown RBP19.24■□□□□ 0.67
CLK3-204ENST00000483723 NRXN3Q9Y4C0 1643 aa19.24■□□□□ 0.67
CLK3-204ENST00000483723 RALBP1Q15311 655 aa19.23■□□□□ 0.67
CLK3-204ENST00000483723 PTPRMP28827 1452 aa19.23■□□□□ 0.67
CLK3-204ENST00000483723 ADAMTSL3P82987 1691 aa19.21■□□□□ 0.67
CLK3-204ENST00000483723 PARD3Q8TEW0 1356 aa19.2■□□□□ 0.66
CLK3-204ENST00000483723 DLC1Q96QB1 1528 aa19.19■□□□□ 0.66
CLK3-204ENST00000483723 LRPPRCP42704 1394 aaKnown RBP19.18■□□□□ 0.66
CLK3-204ENST00000483723 SLIT1O75093 1534 aa19.18■□□□□ 0.66
CLK3-204ENST00000483723 ARHGAP23Q9P227 1491 aa19.18■□□□□ 0.66
CLK3-204ENST00000483723 MRS2Q9HD23 443 aa19.17■□□□□ 0.66
CLK3-204ENST00000483723 ABCC11Q96J66 1382 aa19.17■□□□□ 0.66
CLK3-204ENST00000483723 RIMS1Q86UR5 1692 aaKnown RBP19.16■□□□□ 0.66
CLK3-204ENST00000483723 STK26Q9P289 416 aa19.16■□□□□ 0.66
CLK3-204ENST00000483723 TULP4Q9NRJ4 1543 aa19.16■□□□□ 0.66
CLK3-204ENST00000483723 NPC1L1Q9UHC9 1359 aa19.16■□□□□ 0.66
CLK3-204ENST00000483723 MYBBP1AQ9BQG0 1328 aaKnown RBP19.15■□□□□ 0.66
CLK3-204ENST00000483723 EVC2Q86UK5 1308 aa19.15■□□□□ 0.66
CLK3-204ENST00000483723 PLEKHG1Q9ULL1 1385 aa19.14■□□□□ 0.65
CLK3-204ENST00000483723 LTKP29376 864 aa19.14■□□□□ 0.65
CLK3-204ENST00000483723 AMER1Q5JTC6 1135 aaPredicted RBP19.14■□□□□ 0.65
CLK3-204ENST00000483723 SIRT1Q96EB6 747 aa19.14■□□□□ 0.65
CLK3-204ENST00000483723 BRD4O60885 1362 aaPredicted RBP19.13■□□□□ 0.65
CLK3-204ENST00000483723 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
CLK3-204ENST00000483723 ADAMTS13Q76LX8 1427 aa19.13■□□□□ 0.65
CLK3-204ENST00000483723 MED14O60244 1454 aa19.12■□□□□ 0.65
CLK3-204ENST00000483723 METP08581 1390 aa19.12■□□□□ 0.65
CLK3-204ENST00000483723 THEMISQ8N1K5 641 aaPredicted RBP19.12■□□□□ 0.65
CLK3-204ENST00000483723 PRAM1Q96QH2 718 aa19.12■□□□□ 0.65
CLK3-204ENST00000483723 KNSTRNQ9Y448 316 aa19.12■□□□□ 0.65
CLK3-204ENST00000483723 KNDC1Q76NI1 1749 aa19.12■□□□□ 0.65
CLK3-204ENST00000483723 TXNDC2Q86VQ3 553 aa19.11■□□□□ 0.65
CLK3-204ENST00000483723 TECPR2O15040 1411 aa19.11■□□□□ 0.65
CLK3-204ENST00000483723 POGKQ9P215 609 aa19.1■□□□□ 0.65
CLK3-204ENST00000483723 CNGB1Q14028 1251 aaPredicted RBP19.09■□□□□ 0.65
CLK3-204ENST00000483723 CARD14Q9BXL6 1004 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms