RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 RRP7AQ9Y3A4 280 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP2-216ENST00000483412 H3BQV1 296 aa11.76□□□□□ -0.53
CDK5RAP2-216ENST00000483412 IFFO2Q5TF58 517 aa11.76□□□□□ -0.53
CDK5RAP2-216ENST00000483412 BCL2L13Q9BXK5 485 aa11.76□□□□□ -0.53
CDK5RAP2-216ENST00000483412 CHMP3Q9Y3E7 222 aa11.76□□□□□ -0.53
CDK5RAP2-216ENST00000483412 BECN2A8MW95 431 aa11.76□□□□□ -0.53
CDK5RAP2-216ENST00000483412 GORABQ5T7V8 394 aa11.75□□□□□ -0.53
CDK5RAP2-216ENST00000483412 RILPL2Q969X0 211 aa11.75□□□□□ -0.53
CDK5RAP2-216ENST00000483412 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
CDK5RAP2-216ENST00000483412 HOMEZQ8IX15 550 aa11.75□□□□□ -0.53
CDK5RAP2-216ENST00000483412 NFKBIBQ15653 356 aa11.75□□□□□ -0.53
CDK5RAP2-216ENST00000483412 TRAK1Q9UPV9 953 aa11.75□□□□□ -0.53
CDK5RAP2-216ENST00000483412 CHMP5Q9NZZ3 219 aa11.75□□□□□ -0.53
CDK5RAP2-216ENST00000483412 ARHGAP5Q13017 1502 aa11.75□□□□□ -0.53
CDK5RAP2-216ENST00000483412 TEX35Q5T0J7 233 aa11.75□□□□□ -0.53
CDK5RAP2-216ENST00000483412 PATL2C9JE40 543 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP2-216ENST00000483412 PES1O00541 588 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP2-216ENST00000483412 ATP6V1DQ9Y5K8 247 aa11.74□□□□□ -0.53
CDK5RAP2-216ENST00000483412 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
CDK5RAP2-216ENST00000483412 COG6Q9Y2V7 657 aa11.74□□□□□ -0.53
CDK5RAP2-216ENST00000483412 TPD52L1Q16890 204 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP2-216ENST00000483412 ZNF330Q9Y3S2 320 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP2-216ENST00000483412 ABCA10Q8WWZ4 1543 aa11.73□□□□□ -0.53
CDK5RAP2-216ENST00000483412 PRKRIP1Q9H875 184 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP2-216ENST00000483412 TERF2IPQ9NYB0 399 aa11.73□□□□□ -0.53
CDK5RAP2-216ENST00000483412 KIF3AQ9Y496 699 aa11.73□□□□□ -0.53
CDK5RAP2-216ENST00000483412 R3HCC1Q9Y3T6 440 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP2-216ENST00000483412 FAM184AQ8NB25 1140 aa11.72□□□□□ -0.53
CDK5RAP2-216ENST00000483412 PKNOX2Q96KN3 472 aa11.72□□□□□ -0.53
CDK5RAP2-216ENST00000483412 PEG3Q9GZU2 1588 aa11.72□□□□□ -0.53
CDK5RAP2-216ENST00000483412 ZKSCAN2Q63HK3 967 aa11.71□□□□□ -0.53
CDK5RAP2-216ENST00000483412 VGFO15240 615 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP2-216ENST00000483412 ST20-MTHFSA0A0A6YYL1 179 aa11.71□□□□□ -0.54
CDK5RAP2-216ENST00000483412 E9PSI1 815 aa11.71□□□□□ -0.54
CDK5RAP2-216ENST00000483412 MCTP1Q6DN14 999 aa11.71□□□□□ -0.54
CDK5RAP2-216ENST00000483412 BRPF3Q9ULD4 1205 aa11.71□□□□□ -0.54
CDK5RAP2-216ENST00000483412 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP2-216ENST00000483412 CCDC70Q6NSX1 233 aa11.7□□□□□ -0.54
CDK5RAP2-216ENST00000483412 CGNL1Q0VF96 1302 aa11.7□□□□□ -0.54
CDK5RAP2-216ENST00000483412 IL27Q8NEV9 243 aa11.7□□□□□ -0.54
CDK5RAP2-216ENST00000483412 PANK3Q9H999 370 aa11.7□□□□□ -0.54
CDK5RAP2-216ENST00000483412 TAF7LQ5H9L4 462 aa11.7□□□□□ -0.54
CDK5RAP2-216ENST00000483412 ANKRD50Q9ULJ7 1429 aa11.69□□□□□ -0.54
CDK5RAP2-216ENST00000483412 HECW1Q76N89 1606 aa11.69□□□□□ -0.54
CDK5RAP2-216ENST00000483412 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP2-216ENST00000483412 NUTM2FA1L443 756 aa11.69□□□□□ -0.54
CDK5RAP2-216ENST00000483412 LMOD3Q0VAK6 560 aa11.69□□□□□ -0.54
CDK5RAP2-216ENST00000483412 HOMER1Q86YM7 354 aa11.69□□□□□ -0.54
CDK5RAP2-216ENST00000483412 BCL11BQ9C0K0 894 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP2-216ENST00000483412 NGDNQ8NEJ9 315 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP2-216ENST00000483412 EHBP1L1Q8N3D4 1523 aa11.69□□□□□ -0.54
CDK5RAP2-216ENST00000483412 TPM1P09493 284 aa11.69□□□□□ -0.54
CDK5RAP2-216ENST00000483412 TOMM22Q9NS69 142 aa11.68□□□□□ -0.54
CDK5RAP2-216ENST00000483412 CEP89Q96ST8 783 aa11.68□□□□□ -0.54
CDK5RAP2-216ENST00000483412 HDAC5Q9UQL6 1122 aa11.68□□□□□ -0.54
CDK5RAP2-216ENST00000483412 AFAP1Q8N556 730 aa11.68□□□□□ -0.54
CDK5RAP2-216ENST00000483412 MRE11P49959 708 aa11.68□□□□□ -0.54
CDK5RAP2-216ENST00000483412 CSB-PGBD3P0DP91 1061 aa11.67□□□□□ -0.54
CDK5RAP2-216ENST00000483412 IFT57Q9NWB7 429 aa11.67□□□□□ -0.54
CDK5RAP2-216ENST00000483412 KIAA0586Q9BVV6 1533 aa11.67□□□□□ -0.54
CDK5RAP2-216ENST00000483412 ELL2O00472 640 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP2-216ENST00000483412 NASPP49321 788 aaPredicted RBP11.67□□□□□ -0.54
CDK5RAP2-216ENST00000483412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■■□□ 15.4
CDK5RAP2-216ENST00000483412 CCDC39Q9UFE4 941 aa11.67□□□□□ -0.54
CDK5RAP2-216ENST00000483412 CHMP4AQ9BY43 222 aa11.66□□□□□ -0.54
CDK5RAP2-216ENST00000483412 TPM2P07951 284 aa11.66□□□□□ -0.54
CDK5RAP2-216ENST00000483412 USP47Q96K76 1375 aa11.66□□□□□ -0.54
CDK5RAP2-216ENST00000483412 CCDC9Q9Y3X0 531 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP2-216ENST00000483412 NOM1Q5C9Z4 860 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP2-216ENST00000483412 REC8O95072 547 aa11.65□□□□□ -0.54
CDK5RAP2-216ENST00000483412 BICD2Q8TD16 824 aa11.65□□□□□ -0.54
CDK5RAP2-216ENST00000483412 ANO2Q9NQ90 1003 aa11.65□□□□□ -0.54
CDK5RAP2-216ENST00000483412 CUL7Q14999 1698 aa11.65□□□□□ -0.54
CDK5RAP2-216ENST00000483412 FBXW7Q969H0 707 aa11.65□□□□□ -0.54
CDK5RAP2-216ENST00000483412 MAP7D2Q96T17 732 aa11.65□□□□□ -0.54
CDK5RAP2-216ENST00000483412 TROQ12816 1431 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP2-216ENST00000483412 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP2-216ENST00000483412 IQGAP2Q13576 1575 aa11.65□□□□□ -0.54
CDK5RAP2-216ENST00000483412 CALRP27797 417 aaKnown RBP11.65□□□□□ -0.55
CDK5RAP2-216ENST00000483412 C22orf23Q9BZE7 217 aa11.65□□□□□ -0.55
CDK5RAP2-216ENST00000483412 PRM3Q9NNZ6 103 aa11.65□□□□□ -0.55
CDK5RAP2-216ENST00000483412 NUCB2P80303 420 aa11.64□□□□□ -0.55
CDK5RAP2-216ENST00000483412 MTERF4Q7Z6M4 381 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP2-216ENST00000483412 DIAPH3Q9NSV4 1193 aa11.64□□□□□ -0.55
CDK5RAP2-216ENST00000483412 ARGLU1Q9NWB6 273 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP2-216ENST00000483412 RBM10P98175 930 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP2-216ENST00000483412 TIAM1Q13009 1591 aa11.64□□□□□ -0.55
CDK5RAP2-216ENST00000483412 DDX19BQ9UMR2 479 aa11.64□□□□□ -0.55
CDK5RAP2-216ENST00000483412 RRBP1Q9P2E9 1410 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP2-216ENST00000483412 MNS1Q8NEH6 495 aa11.63□□□□□ -0.55
CDK5RAP2-216ENST00000483412 SASS6Q6UVJ0 657 aa11.63□□□□□ -0.55
CDK5RAP2-216ENST00000483412 EVC2Q86UK5 1308 aa11.63□□□□□ -0.55
CDK5RAP2-216ENST00000483412 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP2-216ENST00000483412 MARCH6O60337 910 aa11.63□□□□□ -0.55
CDK5RAP2-216ENST00000483412 PCMTD1Q96MG8 357 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP2-216ENST00000483412 APAF1O14727 1248 aa11.62□□□□□ -0.55
CDK5RAP2-216ENST00000483412 TRAK2O60296 914 aa11.62□□□□□ -0.55
CDK5RAP2-216ENST00000483412 VPS37CA5D8V6 355 aaPredicted RBP11.61□□□□□ -0.55
CDK5RAP2-216ENST00000483412 DZIP1LQ8IYY4 767 aaKnown RBP11.61□□□□□ -0.55
CDK5RAP2-216ENST00000483412 CDK13Q14004 1512 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms