RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 IRF5Q13568 498 aa5.49□□□□□ -1.53
SMC6-208ENST00000481708 WRNQ14191 1432 aaPredicted RBP eCLIP5.49□□□□□ -1.53
SMC6-208ENST00000481708 GOLGA2Q08379 1002 aa5.49□□□□□ -1.53
SMC6-208ENST00000481708 RAD21O60216 631 aa5.48□□□□□ -1.53
SMC6-208ENST00000481708 MADDQ8WXG6 1647 aa5.48□□□□□ -1.53
SMC6-208ENST00000481708 TIE1P35590 1138 aa5.48□□□□□ -1.53
SMC6-208ENST00000481708 DPY19L2Q6NUT2 758 aa5.48□□□□□ -1.53
SMC6-208ENST00000481708 DDX27Q96GQ7 796 aaKnown RBP5.48□□□□□ -1.53
SMC6-208ENST00000481708 KIDINS220Q9ULH0 1771 aa5.48□□□□□ -1.53
SMC6-208ENST00000481708 TRIM66O15016 1216 aa5.48□□□□□ -1.53
SMC6-208ENST00000481708 PDE4AP27815 886 aa5.48□□□□□ -1.53
SMC6-208ENST00000481708 CAMK2BQ13554 666 aa5.48□□□□□ -1.53
SMC6-208ENST00000481708 FHOD3Q2V2M9 1422 aa5.48□□□□□ -1.53
SMC6-208ENST00000481708 ADGRL1O94910 1474 aa5.48□□□□□ -1.53
SMC6-208ENST00000481708 HECW1Q76N89 1606 aa5.47□□□□□ -1.53
SMC6-208ENST00000481708 PDE4DQ08499 809 aa5.47□□□□□ -1.53
SMC6-208ENST00000481708 MLLT3P42568 568 aaPredicted RBP5.47□□□□□ -1.53
SMC6-208ENST00000481708 TRIM35Q9UPQ4 493 aa5.47□□□□□ -1.53
SMC6-208ENST00000481708 ABCA6Q8N139 1617 aa5.47□□□□□ -1.53
SMC6-208ENST00000481708 MYO3AQ8NEV4 1616 aa5.46□□□□□ -1.53
SMC6-208ENST00000481708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.46□□□□□ -1.542e-6■■□□□ 13.6
SMC6-208ENST00000481708 ARIH1Q9Y4X5 557 aaPredicted RBP5.46□□□□□ -1.54
SMC6-208ENST00000481708 DIP2CQ9Y2E4 1556 aa5.46□□□□□ -1.54
SMC6-208ENST00000481708 TRAK2O60296 914 aa5.46□□□□□ -1.54
SMC6-208ENST00000481708 GPR37O15354 613 aa5.46□□□□□ -1.54
SMC6-208ENST00000481708 PDCD7Q8N8D1 485 aaKnown RBP5.46□□□□□ -1.54
SMC6-208ENST00000481708 TSPOAP1O95153 1857 aa5.45□□□□□ -1.54
SMC6-208ENST00000481708 STRCP1A6NGW2 1772 aa5.45□□□□□ -1.54
SMC6-208ENST00000481708 TRAIPQ9BWF2 469 aa5.45□□□□□ -1.54
SMC6-208ENST00000481708 NWD1Q149M9 1564 aa5.45□□□□□ -1.54
SMC6-208ENST00000481708 KDM5DQ9BY66 1539 aa5.45□□□□□ -1.54
SMC6-208ENST00000481708 POTEHQ6S545 545 aa5.45□□□□□ -1.54
SMC6-208ENST00000481708 POM121Q96HA1 1249 aa5.45□□□□□ -1.54
SMC6-208ENST00000481708 AK7Q96M32 723 aa5.45□□□□□ -1.54
SMC6-208ENST00000481708 CEP170BQ9Y4F5 1589 aaPredicted RBP5.44□□□□□ -1.54
SMC6-208ENST00000481708 GPHNQ9NQX3 736 aaPredicted RBP5.44□□□□□ -1.54
SMC6-208ENST00000481708 NEURL4Q96JN8 1562 aa5.44□□□□□ -1.54
SMC6-208ENST00000481708 PTPN23Q9H3S7 1636 aa5.44□□□□□ -1.54
SMC6-208ENST00000481708 FNBP4Q8N3X1 1017 aaPredicted RBP5.44□□□□□ -1.54
SMC6-208ENST00000481708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMC6-208ENST00000481708 EMILIN3Q9NT22 766 aa5.44□□□□□ -1.54
SMC6-208ENST00000481708 ATN1P54259 1190 aaPredicted RBP5.43□□□□□ -1.54
SMC6-208ENST00000481708 IGF1RP08069 1367 aa5.43□□□□□ -1.54
SMC6-208ENST00000481708 PPP1R15BQ5SWA1 713 aa5.43□□□□□ -1.54
SMC6-208ENST00000481708 RETREG2Q8NC44 543 aa5.43□□□□□ -1.54
SMC6-208ENST00000481708 MROH1Q8NDA8 1641 aa5.43□□□□□ -1.54
SMC6-208ENST00000481708 COL24A1Q17RW2 1714 aa5.43□□□□□ -1.54
SMC6-208ENST00000481708 AEBP1Q8IUX7 1158 aa5.43□□□□□ -1.54
SMC6-208ENST00000481708 MICALL2Q8IY33 904 aa5.43□□□□□ -1.54
SMC6-208ENST00000481708 VWDEQ8N2E2 1590 aa5.42□□□□□ -1.54
SMC6-208ENST00000481708 ZNF316A6NFI3 1004 aaPredicted RBP5.42□□□□□ -1.54
SMC6-208ENST00000481708 DSG2Q14126 1118 aa5.42□□□□□ -1.54
SMC6-208ENST00000481708 RIMS1Q86UR5 1692 aaKnown RBP5.42□□□□□ -1.54
SMC6-208ENST00000481708 RBM25P49756 843 aaKnown RBP5.42□□□□□ -1.54
SMC6-208ENST00000481708 MFAP1P55081 439 aaKnown RBP5.41□□□□□ -1.54
SMC6-208ENST00000481708 IRX5P78411 483 aaPredicted RBP5.41□□□□□ -1.54
SMC6-208ENST00000481708 ABCC1P33527 1531 aa5.41□□□□□ -1.54
SMC6-208ENST00000481708 EIF5BO60841 1220 aaKnown RBP5.41□□□□□ -1.54
SMC6-208ENST00000481708 HAX1O00165 279 aa5.4□□□□□ -1.54
SMC6-208ENST00000481708 ZNF777Q9ULD5 760 aaPredicted RBP5.4□□□□□ -1.54
SMC6-208ENST00000481708 PRG4Q92954 1404 aaPredicted RBP5.4□□□□□ -1.54
SMC6-208ENST00000481708 DPYSL4O14531 572 aa5.4□□□□□ -1.55
SMC6-208ENST00000481708 ATMINO43313 823 aaPredicted RBP5.4□□□□□ -1.55
SMC6-208ENST00000481708 SETD1AO15047 1707 aaKnown RBP5.4□□□□□ -1.55
SMC6-208ENST00000481708 ASTLQ6HA08 431 aaPredicted RBP5.4□□□□□ -1.55
SMC6-208ENST00000481708 TMEM121BQ9BXQ6 578 aaPredicted RBP5.4□□□□□ -1.55
SMC6-208ENST00000481708 UACAQ9BZF9 1416 aa5.39□□□□□ -1.55
SMC6-208ENST00000481708 PIK3C2BO00750 1634 aa5.39□□□□□ -1.55
SMC6-208ENST00000481708 A6NJR5 290 aa5.39□□□□□ -1.55
SMC6-208ENST00000481708 MCM6Q14566 821 aa5.39□□□□□ -1.55
SMC6-208ENST00000481708 ASXL2Q76L83 1435 aa5.39□□□□□ -1.55
SMC6-208ENST00000481708 KIF3CO14782 793 aa5.39□□□□□ -1.55
SMC6-208ENST00000481708 FOXK1P85037 733 aa5.38□□□□□ -1.55
SMC6-208ENST00000481708 GZF1Q9H116 711 aaPredicted RBP5.38□□□□□ -1.55
SMC6-208ENST00000481708 CHMP4AQ9BY43 222 aa5.38□□□□□ -1.55
SMC6-208ENST00000481708 PLA2R1Q13018 1463 aa5.38□□□□□ -1.55
SMC6-208ENST00000481708 PARP9Q8IXQ6 854 aa5.38□□□□□ -1.55
SMC6-208ENST00000481708 GOLGA3Q08378 1498 aa5.38□□□□□ -1.55
SMC6-208ENST00000481708 PDIA6Q15084 440 aa5.37□□□□□ -1.55
SMC6-208ENST00000481708 PRAG1Q86YV5 1406 aa5.37□□□□□ -1.55
SMC6-208ENST00000481708 UGGT1Q9NYU2 1555 aa5.37□□□□□ -1.55
SMC6-208ENST00000481708 C2orf72A6NCS6 295 aa5.37□□□□□ -1.55
SMC6-208ENST00000481708 TMEM92Q6UXU6 159 aa5.37□□□□□ -1.55
SMC6-208ENST00000481708 TNIKQ9UKE5 1360 aa5.37□□□□□ -1.55
SMC6-208ENST00000481708 FBXO31Q5XUX0 539 aaPredicted RBP5.37□□□□□ -1.55
SMC6-208ENST00000481708 MED14O60244 1454 aa5.36□□□□□ -1.55
SMC6-208ENST00000481708 KDM4FA0A1W2PPD8 638 aa5.36□□□□□ -1.55
SMC6-208ENST00000481708 PELP1Q8IZL8 1130 aaKnown RBP5.36□□□□□ -1.55
SMC6-208ENST00000481708 ARHGEF5Q12774 1597 aa5.36□□□□□ -1.55
SMC6-208ENST00000481708 TCOF1Q13428 1488 aaKnown RBP5.36□□□□□ -1.55
SMC6-208ENST00000481708 GPIHBP1Q8IV16 184 aa5.36□□□□□ -1.55
SMC6-208ENST00000481708 OCEL1Q9H607 264 aa5.36□□□□□ -1.55
SMC6-208ENST00000481708 BOLA1Q9Y3E2 137 aa5.36□□□□□ -1.55
SMC6-208ENST00000481708 NUP153P49790 1475 aaKnown RBP5.36□□□□□ -1.55
SMC6-208ENST00000481708 PTPRTO14522 1441 aa5.36□□□□□ -1.55
SMC6-208ENST00000481708 MLH3Q9UHC1 1453 aa5.36□□□□□ -1.55
SMC6-208ENST00000481708 IQGAP3Q86VI3 1631 aa5.35□□□□□ -1.55
SMC6-208ENST00000481708 CARNS1A5YM72 827 aa5.35□□□□□ -1.55
SMC6-208ENST00000481708 SMYD5Q6GMV2 418 aa5.35□□□□□ -1.55
SMC6-208ENST00000481708 PLPP6Q8IY26 295 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms