RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 ADGRB3O60242 1522 aa22.98■■□□□ 1.27
SH3D21-203ENST00000480549 CFAP65Q6ZU64 1925 aaKnown RBP22.98■■□□□ 1.27
SH3D21-203ENST00000480549 FAM69CQ0P6D2 419 aa22.97■■□□□ 1.27
SH3D21-203ENST00000480549 SIGLEC1Q9BZZ2 1709 aa22.97■■□□□ 1.27
SH3D21-203ENST00000480549 ZC3H13Q5T200 1668 aaKnown RBP22.95■■□□□ 1.26
SH3D21-203ENST00000480549 DISP3Q9P2K9 1392 aa22.94■■□□□ 1.26
SH3D21-203ENST00000480549 DEKP35659 375 aaKnown RBP22.94■■□□□ 1.26
SH3D21-203ENST00000480549 WASHC2CQ9Y4E1 1318 aa22.92■■□□□ 1.26
SH3D21-203ENST00000480549 SALL2Q9Y467 1007 aaPredicted RBP22.92■■□□□ 1.26
SH3D21-203ENST00000480549 NRXN1Q9ULB1 1477 aa22.92■■□□□ 1.26
SH3D21-203ENST00000480549 MRS2Q9HD23 443 aa22.91■■□□□ 1.26
SH3D21-203ENST00000480549 SCAF11Q99590 1463 aaKnown RBP22.91■■□□□ 1.26
SH3D21-203ENST00000480549 PPLO60437 1756 aa22.9■■□□□ 1.26
SH3D21-203ENST00000480549 PIK3C2BO00750 1634 aa22.9■■□□□ 1.26
SH3D21-203ENST00000480549 NOS1P29475 1434 aa22.9■■□□□ 1.26
SH3D21-203ENST00000480549 CCDC136Q96JN2 1154 aa22.89■■□□□ 1.26
SH3D21-203ENST00000480549 SYNMO15061 1565 aa22.89■■□□□ 1.25
SH3D21-203ENST00000480549 KIF13AQ9H1H9 1805 aa22.89■■□□□ 1.25
SH3D21-203ENST00000480549 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
SH3D21-203ENST00000480549 ADGRF5Q8IZF2 1346 aa22.87■■□□□ 1.25
SH3D21-203ENST00000480549 ARHGAP31Q2M1Z3 1444 aa22.87■■□□□ 1.25
SH3D21-203ENST00000480549 TMF1P82094 1093 aa22.85■■□□□ 1.25
SH3D21-203ENST00000480549 REREQ9P2R6 1566 aa22.84■■□□□ 1.25
SH3D21-203ENST00000480549 KTN1Q86UP2 1357 aaKnown RBP22.82■■□□□ 1.24
SH3D21-203ENST00000480549 FAM9BQ8IZU0 186 aa22.82■■□□□ 1.24
SH3D21-203ENST00000480549 CNGB1Q14028 1251 aaPredicted RBP22.82■■□□□ 1.24
SH3D21-203ENST00000480549 CFAP70Q5T0N1 1121 aa22.81■■□□□ 1.24
SH3D21-203ENST00000480549 PER1O15534 1290 aaPredicted RBP22.81■■□□□ 1.24
SH3D21-203ENST00000480549 SETBP1Q9Y6X0 1596 aa22.8■■□□□ 1.24
SH3D21-203ENST00000480549 PREX1Q8TCU6 1659 aa22.8■■□□□ 1.24
SH3D21-203ENST00000480549 PIK3C2GO75747 1445 aa22.78■■□□□ 1.24
SH3D21-203ENST00000480549 EIF3AQ14152 1382 aaKnown RBP22.78■■□□□ 1.24
SH3D21-203ENST00000480549 MYO3AQ8NEV4 1616 aa22.78■■□□□ 1.24
SH3D21-203ENST00000480549 CHGAP10645 457 aaKnown RBP22.77■■□□□ 1.24
SH3D21-203ENST00000480549 RALBP1Q15311 655 aa22.77■■□□□ 1.24
SH3D21-203ENST00000480549 MYOM1P52179 1685 aa22.77■■□□□ 1.24
SH3D21-203ENST00000480549 AGLP35573 1532 aa22.77■■□□□ 1.24
SH3D21-203ENST00000480549 PARD3Q8TEW0 1356 aa22.76■■□□□ 1.23
SH3D21-203ENST00000480549 NEXMIFQ5QGS0 1516 aa22.75■■□□□ 1.23
SH3D21-203ENST00000480549 RPGRIP1LQ68CZ1 1315 aa22.75■■□□□ 1.23
SH3D21-203ENST00000480549 MYBBP1AQ9BQG0 1328 aaKnown RBP22.75■■□□□ 1.23
SH3D21-203ENST00000480549 PANK3Q9H999 370 aa22.73■■□□□ 1.23
SH3D21-203ENST00000480549 MYO5BQ9ULV0 1848 aa22.73■■□□□ 1.23
SH3D21-203ENST00000480549 KDM5AP29375 1690 aaKnown RBP22.73■■□□□ 1.23
SH3D21-203ENST00000480549 ADGRB1O14514 1584 aa22.73■■□□□ 1.23
SH3D21-203ENST00000480549 NEFLP07196 543 aa22.73■■□□□ 1.23
SH3D21-203ENST00000480549 BRD4O60885 1362 aaPredicted RBP22.72■■□□□ 1.23
SH3D21-203ENST00000480549 ZBED9Q6R2W3 1325 aa22.71■■□□□ 1.23
SH3D21-203ENST00000480549 PNISRQ8TF01 805 aaKnown RBP22.71■■□□□ 1.23
SH3D21-203ENST00000480549 ARHGEF40Q8TER5 1519 aa22.7■■□□□ 1.22
SH3D21-203ENST00000480549 TMEM131LA2VDJ0 1609 aa22.7■■□□□ 1.22
SH3D21-203ENST00000480549 C14orf93Q9H972 538 aaKnown RBP22.69■■□□□ 1.22
SH3D21-203ENST00000480549 ERVK-7P63135 1459 aa22.69■■□□□ 1.22
SH3D21-203ENST00000480549 IDI1Q13907 227 aa22.69■■□□□ 1.22
SH3D21-203ENST00000480549 CDCA8Q53HL2 280 aa22.68■■□□□ 1.22
SH3D21-203ENST00000480549 CLTCQ00610 1675 aaKnown RBP22.68■■□□□ 1.22
SH3D21-203ENST00000480549 TMC1Q8TDI8 760 aa22.68■■□□□ 1.22
SH3D21-203ENST00000480549 SLC52A1Q9NWF4 448 aa22.67■■□□□ 1.22
SH3D21-203ENST00000480549 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
SH3D21-203ENST00000480549 FANCIQ9NVI1 1328 aa22.66■■□□□ 1.22
SH3D21-203ENST00000480549 SBNO2Q9Y2G9 1366 aa22.66■■□□□ 1.22
SH3D21-203ENST00000480549 UBE2Q2Q8WVN8 375 aa22.65■■□□□ 1.22
SH3D21-203ENST00000480549 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.65■■□□□ 1.22
SH3D21-203ENST00000480549 QRICH2Q9H0J4 1663 aa22.65■■□□□ 1.22
SH3D21-203ENST00000480549 NLRP13Q86W25 1043 aa22.63■■□□□ 1.21
SH3D21-203ENST00000480549 ZFYVE9O95405 1425 aa22.63■■□□□ 1.21
SH3D21-203ENST00000480549 PPP6R1Q9UPN7 881 aa22.62■■□□□ 1.21
SH3D21-203ENST00000480549 CC2D1BQ5T0F9 858 aaKnown RBP22.62■■□□□ 1.21
SH3D21-203ENST00000480549 SLC24A1O60721 1099 aa22.62■■□□□ 1.21
SH3D21-203ENST00000480549 VGFO15240 615 aaPredicted RBP22.61■■□□□ 1.21
SH3D21-203ENST00000480549 ARHGEF28Q8N1W1 1705 aaKnown RBP22.61■■□□□ 1.21
SH3D21-203ENST00000480549 FBXO31Q5XUX0 539 aaPredicted RBP22.6■■□□□ 1.21
SH3D21-203ENST00000480549 CENPJQ9HC77 1338 aaPredicted RBP22.59■■□□□ 1.21
SH3D21-203ENST00000480549 SPATA31D1Q6ZQQ2 1576 aa22.59■■□□□ 1.21
SH3D21-203ENST00000480549 NUTM2DQ5VT03 806 aaPredicted RBP22.58■■□□□ 1.21
SH3D21-203ENST00000480549 TMEM132EQ6IEE7 984 aa22.58■■□□□ 1.21
SH3D21-203ENST00000480549 ASXL1Q8IXJ9 1541 aa22.58■■□□□ 1.21
SH3D21-203ENST00000480549 NBR1Q14596 966 aa22.58■■□□□ 1.2
SH3D21-203ENST00000480549 RTN4Q9NQC3 1192 aaKnown RBP22.58■■□□□ 1.2
SH3D21-203ENST00000480549 TRAK1Q9UPV9 953 aa22.57■■□□□ 1.2
SH3D21-203ENST00000480549 AMER1Q5JTC6 1135 aaPredicted RBP22.56■■□□□ 1.2
SH3D21-203ENST00000480549 ERICH6BQ5W0A0 696 aa22.56■■□□□ 1.2
SH3D21-203ENST00000480549 KNSTRNQ9Y448 316 aa22.55■■□□□ 1.2
SH3D21-203ENST00000480549 NPC1L1Q9UHC9 1359 aa22.53■■□□□ 1.2
SH3D21-203ENST00000480549 MLECQ14165 292 aa22.5■■□□□ 1.19
SH3D21-203ENST00000480549 SMG6Q86US8 1419 aaKnown RBP22.5■■□□□ 1.19
SH3D21-203ENST00000480549 IL27Q8NEV9 243 aa22.48■■□□□ 1.19
SH3D21-203ENST00000480549 A2ML1A8K2U0 1454 aa22.48■■□□□ 1.19
SH3D21-203ENST00000480549 TULP4Q9NRJ4 1543 aa22.47■■□□□ 1.19
SH3D21-203ENST00000480549 INSRP06213 1382 aa22.47■■□□□ 1.19
SH3D21-203ENST00000480549 PPP2R1AP30153 589 aa22.46■■□□□ 1.19
SH3D21-203ENST00000480549 CARD14Q9BXL6 1004 aa22.46■■□□□ 1.19
SH3D21-203ENST00000480549 ALKQ9UM73 1620 aa22.45■■□□□ 1.18
SH3D21-203ENST00000480549 BLMP54132 1417 aaPredicted RBP22.45■■□□□ 1.18
SH3D21-203ENST00000480549 SENP3-EIF4A1A0A087X0R7 540 aa22.43■■□□□ 1.18
SH3D21-203ENST00000480549 PTPRMP28827 1452 aa22.43■■□□□ 1.18
SH3D21-203ENST00000480549 SETD1AO15047 1707 aaKnown RBP22.42■■□□□ 1.18
SH3D21-203ENST00000480549 ZMYM3Q14202 1370 aa22.42■■□□□ 1.18
SH3D21-203ENST00000480549 NUDCQ9Y266 331 aa22.42■■□□□ 1.18
SH3D21-203ENST00000480549 USP32Q8NFA0 1604 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms