RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SPHKAPQ2M3C7 1700 aa23.05■■□□□ 1.28
CDK9-203ENST00000480353 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
CDK9-203ENST00000480353 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.04■■□□□ 1.28
CDK9-203ENST00000480353 SLC26A8Q96RN1 970 aa23.04■■□□□ 1.28
CDK9-203ENST00000480353 RIMS2Q9UQ26 1411 aa23.04■■□□□ 1.28
CDK9-203ENST00000480353 LRRC7Q96NW7 1537 aa23.03■■□□□ 1.28
CDK9-203ENST00000480353 HFM1A2PYH4 1435 aa23.02■■□□□ 1.28
CDK9-203ENST00000480353 ZNF326Q5BKZ1 582 aaKnown RBP22.98■■□□□ 1.27
CDK9-203ENST00000480353 PLEKHG1Q9ULL1 1385 aa22.98■■□□□ 1.27
CDK9-203ENST00000480353 ZFYVE9O95405 1425 aa22.98■■□□□ 1.27
CDK9-203ENST00000480353 KCNA6P17658 529 aa22.97■■□□□ 1.27
CDK9-203ENST00000480353 NUTM2DQ5VT03 806 aaPredicted RBP22.97■■□□□ 1.27
CDK9-203ENST00000480353 PROSER2Q86WR7 435 aaPredicted RBP22.94■■□□□ 1.26
CDK9-203ENST00000480353 SLC4A1APQ9BWU0 796 aaKnown RBP22.94■■□□□ 1.26
CDK9-203ENST00000480353 KIF1BO60333 1816 aa22.94■■□□□ 1.26
CDK9-203ENST00000480353 DISP3Q9P2K9 1392 aa22.91■■□□□ 1.26
CDK9-203ENST00000480353 XIRP1Q702N8 1843 aaKnown RBP22.91■■□□□ 1.26
CDK9-203ENST00000480353 SOCS7O14512 581 aa22.9■■□□□ 1.26
CDK9-203ENST00000480353 TRPM2O94759 1503 aa22.9■■□□□ 1.26
CDK9-203ENST00000480353 NKTRP30414 1462 aaKnown RBP22.89■■□□□ 1.25
CDK9-203ENST00000480353 CLTCL1P53675 1640 aa22.89■■□□□ 1.25
CDK9-203ENST00000480353 TMEM94Q12767 1356 aa22.89■■□□□ 1.25
CDK9-203ENST00000480353 CHD2O14647 1828 aaKnown RBP22.88■■□□□ 1.25
CDK9-203ENST00000480353 HSPA1LP34931 641 aa22.88■■□□□ 1.25
CDK9-203ENST00000480353 TBX22Q9Y458 520 aa22.88■■□□□ 1.25
CDK9-203ENST00000480353 DIP2AQ14689 1571 aa22.88■■□□□ 1.25
CDK9-203ENST00000480353 NWD1Q149M9 1564 aa22.88■■□□□ 1.25
CDK9-203ENST00000480353 C14orf37Q86TY3 774 aa22.85■■□□□ 1.25
CDK9-203ENST00000480353 RBM33Q96EV2 1170 aaKnown RBP22.85■■□□□ 1.25
CDK9-203ENST00000480353 MSH6P52701 1360 aa22.83■■□□□ 1.25
CDK9-203ENST00000480353 ACIN1Q9UKV3 1341 aaKnown RBP22.82■■□□□ 1.24
CDK9-203ENST00000480353 ALKQ9UM73 1620 aa22.82■■□□□ 1.24
CDK9-203ENST00000480353 ILDR2Q71H61 639 aa22.81■■□□□ 1.24
CDK9-203ENST00000480353 ADAMTS13Q76LX8 1427 aa22.81■■□□□ 1.24
CDK9-203ENST00000480353 PIK3R4Q99570 1358 aa22.8■■□□□ 1.24
CDK9-203ENST00000480353 FOXD1Q16676 465 aa22.78■■□□□ 1.24
CDK9-203ENST00000480353 SETD5Q9C0A6 1442 aa22.77■■□□□ 1.24
CDK9-203ENST00000480353 NEXMIFQ5QGS0 1516 aa22.77■■□□□ 1.24
CDK9-203ENST00000480353 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
CDK9-203ENST00000480353 SETBP1Q9Y6X0 1596 aa22.76■■□□□ 1.23
CDK9-203ENST00000480353 VGFO15240 615 aaPredicted RBP22.75■■□□□ 1.23
CDK9-203ENST00000480353 AMOTL2Q9Y2J4 779 aa22.75■■□□□ 1.23
CDK9-203ENST00000480353 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
CDK9-203ENST00000480353 NRXN3Q9Y4C0 1643 aa22.73■■□□□ 1.23
CDK9-203ENST00000480353 RPGRIP1LQ68CZ1 1315 aa22.72■■□□□ 1.23
CDK9-203ENST00000480353 NCOA3Q9Y6Q9 1424 aa22.72■■□□□ 1.23
CDK9-203ENST00000480353 ROBO1Q9Y6N7 1651 aa22.71■■□□□ 1.23
CDK9-203ENST00000480353 FAM135BQ49AJ0 1406 aa22.71■■□□□ 1.23
CDK9-203ENST00000480353 ATF3P18847 181 aa22.7■■□□□ 1.22
CDK9-203ENST00000480353 SLAIN2Q9P270 581 aa22.69■■□□□ 1.22
CDK9-203ENST00000480353 PPLO60437 1756 aa22.68■■□□□ 1.22
CDK9-203ENST00000480353 MED1Q15648 1581 aaPredicted RBP22.67■■□□□ 1.22
CDK9-203ENST00000480353 PTPRUQ92729 1446 aa22.67■■□□□ 1.22
CDK9-203ENST00000480353 RAB3GAP2Q9H2M9 1393 aa22.67■■□□□ 1.22
CDK9-203ENST00000480353 RGL3Q3MIN7 710 aa22.67■■□□□ 1.22
CDK9-203ENST00000480353 CADPS2Q86UW7 1296 aa22.67■■□□□ 1.22
CDK9-203ENST00000480353 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
CDK9-203ENST00000480353 C19orf44Q9H6X5 657 aa22.67■■□□□ 1.22
CDK9-203ENST00000480353 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.66■■□□□ 1.22
CDK9-203ENST00000480353 XRN1Q8IZH2 1706 aaKnown RBP22.65■■□□□ 1.22
CDK9-203ENST00000480353 METP08581 1390 aa22.65■■□□□ 1.22
CDK9-203ENST00000480353 PHLPP1O60346 1717 aa22.62■■□□□ 1.21
CDK9-203ENST00000480353 ANKRD30BQ9BXX2 1392 aa22.58■■□□□ 1.21
CDK9-203ENST00000480353 SETD1AO15047 1707 aaKnown RBP22.57■■□□□ 1.2
CDK9-203ENST00000480353 DCCP43146 1447 aa22.57■■□□□ 1.2
CDK9-203ENST00000480353 IFT172Q9UG01 1749 aa22.55■■□□□ 1.2
CDK9-203ENST00000480353 SPATA31E1Q6ZUB1 1445 aa22.55■■□□□ 1.2
CDK9-203ENST00000480353 ADGRL3Q9HAR2 1447 aa22.53■■□□□ 1.2
CDK9-203ENST00000480353 ADGRF5Q8IZF2 1346 aa22.53■■□□□ 1.2
CDK9-203ENST00000480353 PTCH1Q13635 1447 aa22.52■■□□□ 1.2
CDK9-203ENST00000480353 NALCNQ8IZF0 1738 aa22.51■■□□□ 1.19
CDK9-203ENST00000480353 HRCP23327 699 aa22.49■■□□□ 1.19
CDK9-203ENST00000480353 JCADQ9P266 1359 aa22.49■■□□□ 1.19
CDK9-203ENST00000480353 STK26Q9P289 416 aa22.48■■□□□ 1.19
CDK9-203ENST00000480353 BRINP3Q76B58 766 aa22.47■■□□□ 1.19
CDK9-203ENST00000480353 ROBO2Q9HCK4 1378 aa22.47■■□□□ 1.19
CDK9-203ENST00000480353 MST1RQ04912 1400 aa22.46■■□□□ 1.19
CDK9-203ENST00000480353 COL16A1Q07092 1604 aaPredicted RBP22.46■■□□□ 1.19
CDK9-203ENST00000480353 AHDC1Q5TGY3 1603 aaPredicted RBP22.46■■□□□ 1.19
CDK9-203ENST00000480353 PIK3C2GO75747 1445 aa22.44■■□□□ 1.18
CDK9-203ENST00000480353 ASXL1Q8IXJ9 1541 aa22.44■■□□□ 1.18
CDK9-203ENST00000480353 MEX3CQ5U5Q3 659 aaKnown RBP22.42■■□□□ 1.18
CDK9-203ENST00000480353 TMEM132EQ6IEE7 984 aa22.42■■□□□ 1.18
CDK9-203ENST00000480353 LAMC1P11047 1609 aa22.42■■□□□ 1.18
CDK9-203ENST00000480353 PRAG1Q86YV5 1406 aa22.41■■□□□ 1.18
CDK9-203ENST00000480353 MYOM2P54296 1465 aa22.41■■□□□ 1.18
CDK9-203ENST00000480353 LRPPRCP42704 1394 aaKnown RBP22.4■■□□□ 1.18
CDK9-203ENST00000480353 KNDC1Q76NI1 1749 aa22.4■■□□□ 1.18
CDK9-203ENST00000480353 KDM2AQ9Y2K7 1162 aa22.39■■□□□ 1.17
CDK9-203ENST00000480353 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
CDK9-203ENST00000480353 SPATA31A6Q5VVP1 1343 aa22.38■■□□□ 1.17
CDK9-203ENST00000480353 C1orf167Q5SNV9 1468 aa22.38■■□□□ 1.17
CDK9-203ENST00000480353 SHPRHQ149N8 1683 aa22.38■■□□□ 1.17
CDK9-203ENST00000480353 NHSL1Q5SYE7 1610 aa22.38■■□□□ 1.17
CDK9-203ENST00000480353 DCAF11Q8TEB1 546 aa22.37■■□□□ 1.17
CDK9-203ENST00000480353 YTHDC2Q9H6S0 1430 aaKnown RBP22.37■■□□□ 1.17
CDK9-203ENST00000480353 CFAP70Q5T0N1 1121 aa22.36■■□□□ 1.17
CDK9-203ENST00000480353 WAPLQ7Z5K2 1190 aa22.36■■□□□ 1.17
CDK9-203ENST00000480353 LRRC59Q96AG4 307 aaKnown RBP22.36■■□□□ 1.17
CDK9-203ENST00000480353 C14orf93Q9H972 538 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms