RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 NEXMIFQ5QGS0 1516 aa16.91■□□□□ 0.3
TM9SF4-206ENST00000479591 NLRP1Q9C000 1473 aa16.91■□□□□ 0.3
TM9SF4-206ENST00000479591 KDM4FA0A1W2PPD8 638 aa16.9■□□□□ 0.3
TM9SF4-206ENST00000479591 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
TM9SF4-206ENST00000479591 ROCK2O75116 1388 aaKnown RBP16.89■□□□□ 0.3
TM9SF4-206ENST00000479591 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.3
TM9SF4-206ENST00000479591 ZFYVE9O95405 1425 aa16.89■□□□□ 0.29
TM9SF4-206ENST00000479591 A2ML1A8K2U0 1454 aa16.88■□□□□ 0.29
TM9SF4-206ENST00000479591 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
TM9SF4-206ENST00000479591 CARD11Q9BXL7 1154 aa16.88■□□□□ 0.29
TM9SF4-206ENST00000479591 HSPA5P11021 654 aaKnown RBP16.86■□□□□ 0.29
TM9SF4-206ENST00000479591 CEBPAP49715 358 aaPredicted RBP16.86■□□□□ 0.29
TM9SF4-206ENST00000479591 UBR1Q8IWV7 1749 aa16.86■□□□□ 0.29
TM9SF4-206ENST00000479591 ADGRF5Q8IZF2 1346 aa16.86■□□□□ 0.29
TM9SF4-206ENST00000479591 PIK3C2GO75747 1445 aa16.86■□□□□ 0.29
TM9SF4-206ENST00000479591 USP47Q96K76 1375 aa16.85■□□□□ 0.29
TM9SF4-206ENST00000479591 MYO3AQ8NEV4 1616 aa16.83■□□□□ 0.28
TM9SF4-206ENST00000479591 SETBP1Q9Y6X0 1596 aa16.83■□□□□ 0.28
TM9SF4-206ENST00000479591 NBPF1Q3BBV0 1214 aa16.82■□□□□ 0.28
TM9SF4-206ENST00000479591 RIMS2Q9UQ26 1411 aa16.81■□□□□ 0.28
TM9SF4-206ENST00000479591 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
TM9SF4-206ENST00000479591 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.81■□□□□ 0.28
TM9SF4-206ENST00000479591 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
TM9SF4-206ENST00000479591 IQGAP1P46940 1657 aa16.8■□□□□ 0.28
TM9SF4-206ENST00000479591 C14orf93Q9H972 538 aaKnown RBP16.79■□□□□ 0.28
TM9SF4-206ENST00000479591 SCAF11Q99590 1463 aaKnown RBP16.79■□□□□ 0.28
TM9SF4-206ENST00000479591 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
TM9SF4-206ENST00000479591 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
TM9SF4-206ENST00000479591 SETD1BQ9UPS6 1966 aaKnown RBP16.78■□□□□ 0.28
TM9SF4-206ENST00000479591 POLR1AO95602 1720 aaPredicted RBP16.78■□□□□ 0.28
TM9SF4-206ENST00000479591 PTPRMP28827 1452 aa16.78■□□□□ 0.28
TM9SF4-206ENST00000479591 TMEM2Q9UHN6 1383 aa16.77■□□□□ 0.28
TM9SF4-206ENST00000479591 CEP170BQ9Y4F5 1589 aaPredicted RBP16.77■□□□□ 0.28
TM9SF4-206ENST00000479591 ZNF142P52746 1687 aaPredicted RBP16.77■□□□□ 0.28
TM9SF4-206ENST00000479591 NUTM2DQ5VT03 806 aaPredicted RBP16.76■□□□□ 0.27
TM9SF4-206ENST00000479591 DIEXFQ68CQ4 756 aaKnown RBP16.76■□□□□ 0.27
TM9SF4-206ENST00000479591 EIF3AQ14152 1382 aaKnown RBP16.76■□□□□ 0.27
TM9SF4-206ENST00000479591 SLIT1O75093 1534 aa16.75■□□□□ 0.27
TM9SF4-206ENST00000479591 THEMISQ8N1K5 641 aaPredicted RBP16.75■□□□□ 0.27
TM9SF4-206ENST00000479591 ADGRB1O14514 1584 aa16.75■□□□□ 0.27
TM9SF4-206ENST00000479591 ARHGAP23Q9P227 1491 aa16.74■□□□□ 0.27
TM9SF4-206ENST00000479591 ST20-MTHFSA0A0A6YYL1 179 aa16.73■□□□□ 0.27
TM9SF4-206ENST00000479591 ALKQ9UM73 1620 aa16.72■□□□□ 0.27
TM9SF4-206ENST00000479591 SLC24A1O60721 1099 aa16.7■□□□□ 0.26
TM9SF4-206ENST00000479591 EID1Q9Y6B2 187 aa16.7■□□□□ 0.26
TM9SF4-206ENST00000479591 NRXN3Q9Y4C0 1643 aa16.7■□□□□ 0.26
TM9SF4-206ENST00000479591 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
TM9SF4-206ENST00000479591 CCDC7Q96M83 1385 aa16.69■□□□□ 0.26
TM9SF4-206ENST00000479591 PLEKHG1Q9ULL1 1385 aa16.69■□□□□ 0.26
TM9SF4-206ENST00000479591 SETD1AO15047 1707 aaKnown RBP16.69■□□□□ 0.26
TM9SF4-206ENST00000479591 ASXL1Q8IXJ9 1541 aa16.68■□□□□ 0.26
TM9SF4-206ENST00000479591 TXNDC2Q86VQ3 553 aa16.67■□□□□ 0.26
TM9SF4-206ENST00000479591 KIF7Q2M1P5 1343 aa16.67■□□□□ 0.26
TM9SF4-206ENST00000479591 C11orf95C9JLR9 678 aaPredicted RBP16.66■□□□□ 0.26
TM9SF4-206ENST00000479591 TMEM132EQ6IEE7 984 aa16.66■□□□□ 0.26
TM9SF4-206ENST00000479591 TESK2Q96S53 571 aa16.66■□□□□ 0.26
TM9SF4-206ENST00000479591 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
TM9SF4-206ENST00000479591 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
TM9SF4-206ENST00000479591 LTKP29376 864 aa16.65■□□□□ 0.26
TM9SF4-206ENST00000479591 DDX10Q13206 875 aaKnown RBP16.65■□□□□ 0.26
TM9SF4-206ENST00000479591 YTHDC2Q9H6S0 1430 aaKnown RBP16.64■□□□□ 0.25
TM9SF4-206ENST00000479591 TMF1P82094 1093 aa16.64■□□□□ 0.25
TM9SF4-206ENST00000479591 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
TM9SF4-206ENST00000479591 TRAK1Q9UPV9 953 aa16.63■□□□□ 0.25
TM9SF4-206ENST00000479591 CENPJQ9HC77 1338 aaPredicted RBP16.63■□□□□ 0.25
TM9SF4-206ENST00000479591 DLC1Q96QB1 1528 aa16.62■□□□□ 0.25
TM9SF4-206ENST00000479591 BCANQ96GW7 911 aa16.62■□□□□ 0.25
TM9SF4-206ENST00000479591 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
TM9SF4-206ENST00000479591 LRPPRCP42704 1394 aaKnown RBP16.62■□□□□ 0.25
TM9SF4-206ENST00000479591 ADAMTS13Q76LX8 1427 aa16.62■□□□□ 0.25
TM9SF4-206ENST00000479591 MED14O60244 1454 aa16.61■□□□□ 0.25
TM9SF4-206ENST00000479591 CDCA8Q53HL2 280 aa16.61■□□□□ 0.25
TM9SF4-206ENST00000479591 KNDC1Q76NI1 1749 aa16.61■□□□□ 0.25
TM9SF4-206ENST00000479591 ANKLE2Q86XL3 938 aa16.6■□□□□ 0.25
TM9SF4-206ENST00000479591 SENP3Q9H4L4 574 aaPredicted RBP16.59■□□□□ 0.25
TM9SF4-206ENST00000479591 ABCC11Q96J66 1382 aa16.59■□□□□ 0.25
TM9SF4-206ENST00000479591 DISP3Q9P2K9 1392 aa16.59■□□□□ 0.25
TM9SF4-206ENST00000479591 TBX22Q9Y458 520 aa16.58■□□□□ 0.24
TM9SF4-206ENST00000479591 METP08581 1390 aa16.58■□□□□ 0.24
TM9SF4-206ENST00000479591 TECPR2O15040 1411 aa16.57■□□□□ 0.24
TM9SF4-206ENST00000479591 STK26Q9P289 416 aa16.57■□□□□ 0.24
TM9SF4-206ENST00000479591 SIRT1Q96EB6 747 aa16.56■□□□□ 0.24
TM9SF4-206ENST00000479591 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
TM9SF4-206ENST00000479591 CPS1P31327 1500 aa16.55■□□□□ 0.24
TM9SF4-206ENST00000479591 FAM135BQ49AJ0 1406 aa16.54■□□□□ 0.24
TM9SF4-206ENST00000479591 PIK3R4Q99570 1358 aa16.54■□□□□ 0.24
TM9SF4-206ENST00000479591 PRAM1Q96QH2 718 aa16.53■□□□□ 0.24
TM9SF4-206ENST00000479591 POGKQ9P215 609 aa16.53■□□□□ 0.24
TM9SF4-206ENST00000479591 PUS7Q96PZ0 661 aaKnown RBP16.52■□□□□ 0.24
TM9SF4-206ENST00000479591 SLC26A8Q96RN1 970 aa16.52■□□□□ 0.24
TM9SF4-206ENST00000479591 NPHP4O75161 1426 aaPredicted RBP16.52■□□□□ 0.23
TM9SF4-206ENST00000479591 EVC2Q86UK5 1308 aa16.51■□□□□ 0.23
TM9SF4-206ENST00000479591 TULP4Q9NRJ4 1543 aa16.5■□□□□ 0.23
TM9SF4-206ENST00000479591 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
TM9SF4-206ENST00000479591 XRN1Q8IZH2 1706 aaKnown RBP16.49■□□□□ 0.23
TM9SF4-206ENST00000479591 MIER1Q8N108 512 aa16.49■□□□□ 0.23
TM9SF4-206ENST00000479591 PTPRUQ92729 1446 aa16.48■□□□□ 0.23
TM9SF4-206ENST00000479591 ANP32CO43423 234 aa16.48■□□□□ 0.23
TM9SF4-206ENST00000479591 MYOM1P52179 1685 aa16.47■□□□□ 0.23
TM9SF4-206ENST00000479591 LMTK3Q96Q04 1460 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms