RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 MFAP1P55081 439 aaKnown RBP8.03□□□□□ -1.12
SPTLC3-205ENST00000476791 UPF1Q92900 1129 aaKnown RBP eCLIP8.03□□□□□ -1.12
SPTLC3-205ENST00000476791 PCGF6Q9BYE7 350 aa8.03□□□□□ -1.12
SPTLC3-205ENST00000476791 CLGNO14967 610 aa8.02□□□□□ -1.13
SPTLC3-205ENST00000476791 PHF14O94880 888 aa8.01□□□□□ -1.13
SPTLC3-205ENST00000476791 MMP14P50281 582 aa8.01□□□□□ -1.13
SPTLC3-205ENST00000476791 VARS2Q5ST30 1063 aaKnown RBP8.01□□□□□ -1.13
SPTLC3-205ENST00000476791 HDAC5Q9UQL6 1122 aa8.01□□□□□ -1.13
SPTLC3-205ENST00000476791 PTCD2Q8WV60 388 aaKnown RBP8.01□□□□□ -1.13
SPTLC3-205ENST00000476791 MFSD10Q14728 455 aa8□□□□□ -1.13
SPTLC3-205ENST00000476791 EXOC8Q8IYI6 725 aa8□□□□□ -1.13
SPTLC3-205ENST00000476791 ZNF622Q969S3 477 aaKnown RBP eCLIP8□□□□□ -1.13
SPTLC3-205ENST00000476791 HSP90AB4PQ58FF6 505 aa7.99□□□□□ -1.13
SPTLC3-205ENST00000476791 SH3BP1Q9Y3L3 701 aa7.99□□□□□ -1.13
SPTLC3-205ENST00000476791 MPNDQ8N594 471 aa7.98□□□□□ -1.13
SPTLC3-205ENST00000476791 RIPOR2Q9Y4F9 1068 aa7.98□□□□□ -1.13
SPTLC3-205ENST00000476791 CCDC125Q86Z20 511 aa7.97□□□□□ -1.13
SPTLC3-205ENST00000476791 OXER1Q8TDS5 423 aa7.97□□□□□ -1.13
SPTLC3-205ENST00000476791 PCDH10Q9P2E7 1040 aa7.97□□□□□ -1.13
SPTLC3-205ENST00000476791 LHX6Q9UPM6 363 aa7.97□□□□□ -1.13
SPTLC3-205ENST00000476791 VGLL3A8MV65 326 aa7.97□□□□□ -1.13
SPTLC3-205ENST00000476791 RRP9O43818 475 aaKnown RBP7.97□□□□□ -1.13
SPTLC3-205ENST00000476791 TBC1D12O60347 775 aa7.97□□□□□ -1.13
SPTLC3-205ENST00000476791 TMEM51Q9NW97 253 aa7.96□□□□□ -1.13
SPTLC3-205ENST00000476791 TMCO4Q5TGY1 634 aa7.96□□□□□ -1.14
SPTLC3-205ENST00000476791 EMILIN3Q9NT22 766 aa7.96□□□□□ -1.14
SPTLC3-205ENST00000476791 E9PSI1 815 aa7.95□□□□□ -1.14
SPTLC3-205ENST00000476791 SMARCA5O60264 1052 aaPredicted RBP7.95□□□□□ -1.14
SPTLC3-205ENST00000476791 NEUROD2Q15784 382 aa7.95□□□□□ -1.14
SPTLC3-205ENST00000476791 HSP90AA2PQ14568 343 aaPredicted RBP7.94□□□□□ -1.14
SPTLC3-205ENST00000476791 GZF1Q9H116 711 aaPredicted RBP7.94□□□□□ -1.14
SPTLC3-205ENST00000476791 EVI5LQ96CN4 794 aa7.94□□□□□ -1.14
SPTLC3-205ENST00000476791 KDM4FA0A1W2PPD8 638 aa7.93□□□□□ -1.14
SPTLC3-205ENST00000476791 CALD1Q05682 793 aaKnown RBP7.93□□□□□ -1.14
SPTLC3-205ENST00000476791 MAP3K9P80192 1104 aa7.93□□□□□ -1.14
SPTLC3-205ENST00000476791 CCDC82Q8N4S0 544 aa7.93□□□□□ -1.14
SPTLC3-205ENST00000476791 PLSCR2Q9NRY7 297 aa7.93□□□□□ -1.14
SPTLC3-205ENST00000476791 IRF6O14896 467 aa7.92□□□□□ -1.14
SPTLC3-205ENST00000476791 IRX3P78415 501 aaPredicted RBP7.92□□□□□ -1.14
SPTLC3-205ENST00000476791 SPTY2D1Q68D10 685 aaPredicted RBP7.92□□□□□ -1.14
SPTLC3-205ENST00000476791 WDR70Q9NW82 654 aa7.92□□□□□ -1.14
SPTLC3-205ENST00000476791 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
SPTLC3-205ENST00000476791 KRTAP3-2Q9BYR7 98 aa7.92□□□□□ -1.14
SPTLC3-205ENST00000476791 RBM19Q9Y4C8 960 aaKnown RBP7.92□□□□□ -1.14
SPTLC3-205ENST00000476791 APPP05067 770 aa7.91□□□□□ -1.14
SPTLC3-205ENST00000476791 SEMA3FQ13275 785 aa7.91□□□□□ -1.14
SPTLC3-205ENST00000476791 ZNF687Q8N1G0 1237 aa7.91□□□□□ -1.14
SPTLC3-205ENST00000476791 EVI5O60447 810 aa7.9□□□□□ -1.14
SPTLC3-205ENST00000476791 CAMK2BQ13554 666 aa7.9□□□□□ -1.14
SPTLC3-205ENST00000476791 RGL3Q3MIN7 710 aa7.9□□□□□ -1.14
SPTLC3-205ENST00000476791 DPYSL4O14531 572 aa7.9□□□□□ -1.15
SPTLC3-205ENST00000476791 NOL8Q76FK4 1167 aaKnown RBP7.89□□□□□ -1.15
SPTLC3-205ENST00000476791 GPBP1L1Q9HC44 474 aaPredicted RBP7.89□□□□□ -1.15
SPTLC3-205ENST00000476791 DNAJC14Q6Y2X3 702 aaPredicted RBP7.89□□□□□ -1.15
SPTLC3-205ENST00000476791 EGFL6Q8IUX8 553 aa7.89□□□□□ -1.15
SPTLC3-205ENST00000476791 SUPT16HQ9Y5B9 1047 aaKnown RBP7.89□□□□□ -1.15
SPTLC3-205ENST00000476791 RINLQ6ZS11 566 aa7.88□□□□□ -1.15
SPTLC3-205ENST00000476791 NME8Q8N427 588 aa7.88□□□□□ -1.15
SPTLC3-205ENST00000476791 E2F4Q16254 413 aa7.88□□□□□ -1.15
SPTLC3-205ENST00000476791 AXIN2Q9Y2T1 843 aa7.88□□□□□ -1.15
SPTLC3-205ENST00000476791 APBB1IPQ7Z5R6 666 aaPredicted RBP7.87□□□□□ -1.15
SPTLC3-205ENST00000476791 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.87□□□□□ -1.15
SPTLC3-205ENST00000476791 ZNF454Q8N9F8 522 aa7.87□□□□□ -1.15
SPTLC3-205ENST00000476791 YTHDC1Q96MU7 727 aaKnown RBP7.86□□□□□ -1.15
SPTLC3-205ENST00000476791 CARD10Q9BWT7 1032 aa7.86□□□□□ -1.15
SPTLC3-205ENST00000476791 RPS6KL1Q9Y6S9 549 aa7.86□□□□□ -1.15
SPTLC3-205ENST00000476791 PSDA5PKW4 1024 aaPredicted RBP7.86□□□□□ -1.15
SPTLC3-205ENST00000476791 CCDC96Q2M329 555 aa7.86□□□□□ -1.15
SPTLC3-205ENST00000476791 NGEFQ8N5V2 710 aa7.86□□□□□ -1.15
SPTLC3-205ENST00000476791 MARCH6O60337 910 aa7.85□□□□□ -1.15
SPTLC3-205ENST00000476791 FOXD4Q12950 439 aaPredicted RBP7.85□□□□□ -1.15
SPTLC3-205ENST00000476791 PPP4R3BQ5MIZ7 849 aa7.85□□□□□ -1.15
SPTLC3-205ENST00000476791 POTEEQ6S8J3 1075 aa7.85□□□□□ -1.15
SPTLC3-205ENST00000476791 AXDND1Q5T1B0 1012 aaPredicted RBP7.85□□□□□ -1.15
SPTLC3-205ENST00000476791 TSHZ1Q6ZSZ6 1077 aa7.84□□□□□ -1.15
SPTLC3-205ENST00000476791 ARMCX6Q7L4S7 300 aa7.84□□□□□ -1.15
SPTLC3-205ENST00000476791 NBPF11Q86T75 865 aa7.84□□□□□ -1.15
SPTLC3-205ENST00000476791 TERF2IPQ9NYB0 399 aa7.84□□□□□ -1.15
SPTLC3-205ENST00000476791 C11orf95C9JLR9 678 aaPredicted RBP7.84□□□□□ -1.16
SPTLC3-205ENST00000476791 NBPF1Q3BBV0 1214 aa7.84□□□□□ -1.16
SPTLC3-205ENST00000476791 TESPA1A2RU30 521 aaPredicted RBP7.83□□□□□ -1.16
SPTLC3-205ENST00000476791 TTC36A6NLP5 189 aa7.83□□□□□ -1.16
SPTLC3-205ENST00000476791 POLD1P28340 1107 aa7.83□□□□□ -1.16
SPTLC3-205ENST00000476791 SPNS2Q8IVW8 549 aa7.83□□□□□ -1.16
SPTLC3-205ENST00000476791 ANKRD13DQ6ZTN6 518 aa7.83□□□□□ -1.16
SPTLC3-205ENST00000476791 RBM27Q9P2N5 1060 aaKnown RBP7.83□□□□□ -1.16
SPTLC3-205ENST00000476791 PPME1Q9Y570 386 aa7.83□□□□□ -1.16
SPTLC3-205ENST00000476791 FOSBP53539 338 aa7.82□□□□□ -1.16
SPTLC3-205ENST00000476791 SUGT1Q9Y2Z0 365 aa7.82□□□□□ -1.16
SPTLC3-205ENST00000476791 PSEN2P49810 448 aa7.81□□□□□ -1.16
SPTLC3-205ENST00000476791 NBPF20Q3BBV1 942 aa7.81□□□□□ -1.16
SPTLC3-205ENST00000476791 SIRT1Q96EB6 747 aa7.81□□□□□ -1.16
SPTLC3-205ENST00000476791 P3H3Q8IVL6 736 aa7.81□□□□□ -1.16
SPTLC3-205ENST00000476791 JPH4Q96JJ6 628 aa7.81□□□□□ -1.16
SPTLC3-205ENST00000476791 ARHGAP33O14559 1287 aa7.8□□□□□ -1.16
SPTLC3-205ENST00000476791 IRF5Q13568 498 aa7.8□□□□□ -1.16
SPTLC3-205ENST00000476791 UNCXA6NJT0 531 aa7.8□□□□□ -1.16
SPTLC3-205ENST00000476791 TPD52L2O43399 206 aaKnown RBP7.8□□□□□ -1.16
SPTLC3-205ENST00000476791 PBX2P40425 430 aa7.8□□□□□ -1.16
SPTLC3-205ENST00000476791 LSM11P83369 360 aaKnown RBP eCLIP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms