RNA–Protein interactions for RNA: ENST00000475087.5

COCH-205, Transcript of cochlin, humanhuman

TSL 1 (best) BASIC

Gene COCH, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-205ENST00000475087 NBPF8Q3BBV2 869 aa30.23■■■□□ 2.43
COCH-205ENST00000475087 PPLO60437 1756 aa30.22■■■□□ 2.43
COCH-205ENST00000475087 MYOM2P54296 1465 aa30.22■■■□□ 2.43
COCH-205ENST00000475087 ZNF142P52746 1687 aaPredicted RBP30.2■■■□□ 2.43
COCH-205ENST00000475087 THEMISQ8N1K5 641 aaPredicted RBP30.19■■■□□ 2.42
COCH-205ENST00000475087 PRAG1Q86YV5 1406 aa30.19■■■□□ 2.42
COCH-205ENST00000475087 TMEM2Q9UHN6 1383 aa30.18■■■□□ 2.42
COCH-205ENST00000475087 VGFO15240 615 aaPredicted RBP30.18■■■□□ 2.42
COCH-205ENST00000475087 ZFYVE9O95405 1425 aa30.17■■■□□ 2.42
COCH-205ENST00000475087 RIMS2Q9UQ26 1411 aa30.17■■■□□ 2.42
COCH-205ENST00000475087 ADGRF5Q8IZF2 1346 aa30.17■■■□□ 2.42
COCH-205ENST00000475087 NRXN1Q9ULB1 1477 aa30.16■■■□□ 2.42
COCH-205ENST00000475087 NUTM2DQ5VT03 806 aaPredicted RBP30.14■■■□□ 2.42
COCH-205ENST00000475087 HDGFP51858 240 aaKnown RBP30.13■■■□□ 2.41
COCH-205ENST00000475087 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.13■■■□□ 2.41
COCH-205ENST00000475087 ARHGAP23Q9P227 1491 aa30.13■■■□□ 2.41
COCH-205ENST00000475087 SLIT1O75093 1534 aa30.13■■■□□ 2.41
COCH-205ENST00000475087 PIK3C2GO75747 1445 aa30.08■■■□□ 2.41
COCH-205ENST00000475087 RALGAPBQ86X10 1494 aa30.07■■■□□ 2.4
COCH-205ENST00000475087 TRPM1Q7Z4N2 1603 aa30.06■■■□□ 2.4
COCH-205ENST00000475087 LTKP29376 864 aa30.05■■■□□ 2.4
COCH-205ENST00000475087 TXNDC2Q86VQ3 553 aa30.05■■■□□ 2.4
COCH-205ENST00000475087 EID1Q9Y6B2 187 aa30.04■■■□□ 2.4
COCH-205ENST00000475087 C14orf93Q9H972 538 aaKnown RBP30.01■■■□□ 2.4
COCH-205ENST00000475087 CFAP70Q5T0N1 1121 aa30.01■■■□□ 2.39
COCH-205ENST00000475087 KIAA1210Q9ULL0 1709 aa30■■■□□ 2.39
COCH-205ENST00000475087 NBPF1Q3BBV0 1214 aa30■■■□□ 2.39
COCH-205ENST00000475087 SCAF11Q99590 1463 aaKnown RBP29.99■■■□□ 2.39
COCH-205ENST00000475087 ROCK2O75116 1388 aaKnown RBP29.98■■■□□ 2.39
COCH-205ENST00000475087 ANKLE2Q86XL3 938 aa29.97■■■□□ 2.39
COCH-205ENST00000475087 GPRASP1Q5JY77 1395 aa29.97■■■□□ 2.39
COCH-205ENST00000475087 PLEKHG1Q9ULL1 1385 aa29.97■■■□□ 2.39
COCH-205ENST00000475087 LMTK3Q96Q04 1460 aa29.97■■■□□ 2.39
COCH-205ENST00000475087 SETBP1Q9Y6X0 1596 aa29.95■■■□□ 2.38
COCH-205ENST00000475087 SENP3Q9H4L4 574 aaPredicted RBP29.94■■■□□ 2.38
COCH-205ENST00000475087 LAMC1P11047 1609 aa29.94■■■□□ 2.38
COCH-205ENST00000475087 CARD11Q9BXL7 1154 aa29.94■■■□□ 2.38
COCH-205ENST00000475087 ALKQ9UM73 1620 aa29.92■■■□□ 2.38
COCH-205ENST00000475087 NRXN3Q9Y4C0 1643 aa29.92■■■□□ 2.38
COCH-205ENST00000475087 HSPA2P54652 639 aa29.88■■■□□ 2.37
COCH-205ENST00000475087 BCANQ96GW7 911 aa29.88■■■□□ 2.37
COCH-205ENST00000475087 ADGRB1O14514 1584 aa29.88■■■□□ 2.37
COCH-205ENST00000475087 IQGAP1P46940 1657 aa29.88■■■□□ 2.37
COCH-205ENST00000475087 ADAMTS13Q76LX8 1427 aa29.87■■■□□ 2.37
COCH-205ENST00000475087 TMEM132EQ6IEE7 984 aa29.85■■■□□ 2.37
COCH-205ENST00000475087 MED14O60244 1454 aa29.85■■■□□ 2.37
COCH-205ENST00000475087 SETD1AO15047 1707 aaKnown RBP29.85■■■□□ 2.37
COCH-205ENST00000475087 EIF4G2P78344 907 aaKnown RBP eCLIP29.84■■■□□ 2.37
COCH-205ENST00000475087 NCKAP5LQ9HCH0 1330 aa29.84■■■□□ 2.37
COCH-205ENST00000475087 POLR1AO95602 1720 aaPredicted RBP29.84■■■□□ 2.37
COCH-205ENST00000475087 ASXL1Q8IXJ9 1541 aa29.83■■■□□ 2.37
COCH-205ENST00000475087 USP47Q96K76 1375 aa29.82■■■□□ 2.36
COCH-205ENST00000475087 TBX22Q9Y458 520 aa29.82■■■□□ 2.36
COCH-205ENST00000475087 NPHP4O75161 1426 aaPredicted RBP29.81■■■□□ 2.36
COCH-205ENST00000475087 SLC26A8Q96RN1 970 aa29.81■■■□□ 2.36
COCH-205ENST00000475087 HSPA5P11021 654 aaKnown RBP29.8■■■□□ 2.36
COCH-205ENST00000475087 DIP2AQ14689 1571 aa29.79■■■□□ 2.36
COCH-205ENST00000475087 METP08581 1390 aa29.79■■■□□ 2.36
COCH-205ENST00000475087 YTHDC2Q9H6S0 1430 aaKnown RBP29.76■■■□□ 2.35
COCH-205ENST00000475087 HIRIP3Q9BW71 556 aaPredicted RBP29.73■■■□□ 2.35
COCH-205ENST00000475087 TRAK1Q9UPV9 953 aa29.73■■■□□ 2.35
COCH-205ENST00000475087 LRPPRCP42704 1394 aaKnown RBP29.73■■■□□ 2.35
COCH-205ENST00000475087 ST20-MTHFSA0A0A6YYL1 179 aa29.71■■■□□ 2.35
COCH-205ENST00000475087 STK26Q9P289 416 aa29.71■■■□□ 2.35
COCH-205ENST00000475087 EIF3AQ14152 1382 aaKnown RBP29.7■■■□□ 2.35
COCH-205ENST00000475087 PIK3R4Q99570 1358 aa29.7■■■□□ 2.35
COCH-205ENST00000475087 STRCQ7RTU9 1775 aa29.7■■■□□ 2.35
COCH-205ENST00000475087 ABCC11Q96J66 1382 aa29.7■■■□□ 2.34
COCH-205ENST00000475087 ZNF316A6NFI3 1004 aaPredicted RBP29.69■■■□□ 2.34
COCH-205ENST00000475087 PTPRUQ92729 1446 aa29.67■■■□□ 2.34
COCH-205ENST00000475087 TECPR2O15040 1411 aa29.64■■■□□ 2.34
COCH-205ENST00000475087 DLC1Q96QB1 1528 aa29.64■■■□□ 2.34
COCH-205ENST00000475087 ARHGEF28Q8N1W1 1705 aaKnown RBP29.64■■■□□ 2.33
COCH-205ENST00000475087 AMOTL2Q9Y2J4 779 aa29.63■■■□□ 2.33
COCH-205ENST00000475087 SIRT1Q96EB6 747 aa29.62■■■□□ 2.33
COCH-205ENST00000475087 KNDC1Q76NI1 1749 aa29.62■■■□□ 2.33
COCH-205ENST00000475087 CENPJQ9HC77 1338 aaPredicted RBP29.61■■■□□ 2.33
COCH-205ENST00000475087 TESK2Q96S53 571 aa29.61■■■□□ 2.33
COCH-205ENST00000475087 AEBP2Q6ZN18 517 aaPredicted RBP29.61■■■□□ 2.33
COCH-205ENST00000475087 CPS1P31327 1500 aa29.59■■■□□ 2.33
COCH-205ENST00000475087 PRAM1Q96QH2 718 aa29.58■■■□□ 2.33
COCH-205ENST00000475087 XRN1Q8IZH2 1706 aaKnown RBP29.57■■■□□ 2.32
COCH-205ENST00000475087 FAM135BQ49AJ0 1406 aa29.57■■■□□ 2.32
COCH-205ENST00000475087 CHD2O14647 1828 aaKnown RBP29.57■■■□□ 2.32
COCH-205ENST00000475087 SBNO2Q9Y2G9 1366 aa29.56■■■□□ 2.32
COCH-205ENST00000475087 POGKQ9P215 609 aa29.55■■■□□ 2.32
COCH-205ENST00000475087 ROBO2Q9HCK4 1378 aa29.55■■■□□ 2.32
COCH-205ENST00000475087 KCNA6P17658 529 aa29.55■■■□□ 2.32
COCH-205ENST00000475087 DMRT2Q9Y5R5 561 aa29.55■■■□□ 2.32
COCH-205ENST00000475087 WAPLQ7Z5K2 1190 aa29.54■■■□□ 2.32
COCH-205ENST00000475087 PTCH1Q13635 1447 aa29.54■■■□□ 2.32
COCH-205ENST00000475087 SLC24A1O60721 1099 aa29.53■■■□□ 2.32
COCH-205ENST00000475087 PLEKHH1Q9ULM0 1364 aa29.52■■■□□ 2.32
COCH-205ENST00000475087 QRICH2Q9H0J4 1663 aa29.52■■■□□ 2.32
COCH-205ENST00000475087 C11orf95C9JLR9 678 aaPredicted RBP29.52■■■□□ 2.32
COCH-205ENST00000475087 SAFB2Q14151 953 aaKnown RBP eCLIP29.51■■■□□ 2.31
COCH-205ENST00000475087 NWD1Q149M9 1564 aa29.51■■■□□ 2.31
COCH-205ENST00000475087 TMF1P82094 1093 aa29.5■■■□□ 2.31
COCH-205ENST00000475087 DISP3Q9P2K9 1392 aa29.46■■■□□ 2.31
COCH-205ENST00000475087 WASHC2AQ641Q2 1341 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms