RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 FGD6Q6ZV73 1430 aa20.93■□□□□ 0.94
RTN4R-206ENST00000474642 ADGRB3O60242 1522 aa20.93■□□□□ 0.94
RTN4R-206ENST00000474642 LRP6O75581 1613 aa20.93■□□□□ 0.94
RTN4R-206ENST00000474642 PPP1R15AO75807 674 aaPredicted RBP20.92■□□□□ 0.94
RTN4R-206ENST00000474642 RXRBP28702 533 aa20.92■□□□□ 0.94
RTN4R-206ENST00000474642 SLC52A1Q9NWF4 448 aa20.92■□□□□ 0.94
RTN4R-206ENST00000474642 LMTK2Q8IWU2 1503 aa20.91■□□□□ 0.94
RTN4R-206ENST00000474642 NOS1P29475 1434 aa20.9■□□□□ 0.94
RTN4R-206ENST00000474642 VPS8Q8N3P4 1428 aa20.9■□□□□ 0.94
RTN4R-206ENST00000474642 HDGFP51858 240 aaKnown RBP20.9■□□□□ 0.94
RTN4R-206ENST00000474642 CHD2O14647 1828 aaKnown RBP20.89■□□□□ 0.93
RTN4R-206ENST00000474642 CROCC2H7BZ55 1655 aa20.89■□□□□ 0.93
RTN4R-206ENST00000474642 PLEKHG1Q9ULL1 1385 aa20.88■□□□□ 0.93
RTN4R-206ENST00000474642 CADPS2Q86UW7 1296 aa20.87■□□□□ 0.93
RTN4R-206ENST00000474642 CHIC2Q9UKJ5 165 aa20.87■□□□□ 0.93
RTN4R-206ENST00000474642 NCOA3Q9Y6Q9 1424 aa20.87■□□□□ 0.93
RTN4R-206ENST00000474642 NUTM2BA6NNL0 878 aaPredicted RBP20.86■□□□□ 0.93
RTN4R-206ENST00000474642 NUTM2EB1AL46 878 aaPredicted RBP20.86■□□□□ 0.93
RTN4R-206ENST00000474642 ATF3P18847 181 aa20.86■□□□□ 0.93
RTN4R-206ENST00000474642 NUTM2AQ8IVF1 878 aaPredicted RBP20.86■□□□□ 0.93
RTN4R-206ENST00000474642 DAPK1P53355 1430 aa20.86■□□□□ 0.93
RTN4R-206ENST00000474642 ANKRD30AQ9BXX3 1397 aa20.85■□□□□ 0.93
RTN4R-206ENST00000474642 C19orf44Q9H6X5 657 aa20.84■□□□□ 0.93
RTN4R-206ENST00000474642 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
RTN4R-206ENST00000474642 ZFYVE9O95405 1425 aa20.84■□□□□ 0.93
RTN4R-206ENST00000474642 RIMS2Q9UQ26 1411 aa20.84■□□□□ 0.93
RTN4R-206ENST00000474642 SHPRHQ149N8 1683 aa20.83■□□□□ 0.93
RTN4R-206ENST00000474642 AHDC1Q5TGY3 1603 aaPredicted RBP20.83■□□□□ 0.93
RTN4R-206ENST00000474642 PTPN23Q9H3S7 1636 aa20.83■□□□□ 0.93
RTN4R-206ENST00000474642 CDK12Q9NYV4 1490 aaPredicted RBP20.81■□□□□ 0.92
RTN4R-206ENST00000474642 MYO5BQ9ULV0 1848 aa20.81■□□□□ 0.92
RTN4R-206ENST00000474642 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.8■□□□□ 0.92
RTN4R-206ENST00000474642 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.8■□□□□ 0.92
RTN4R-206ENST00000474642 AFF2P51816 1311 aa20.79■□□□□ 0.92
RTN4R-206ENST00000474642 CHGAP10645 457 aaKnown RBP20.79■□□□□ 0.92
RTN4R-206ENST00000474642 BRINP3Q76B58 766 aa20.78■□□□□ 0.92
RTN4R-206ENST00000474642 RPRD2Q5VT52 1461 aaKnown RBP20.77■□□□□ 0.92
RTN4R-206ENST00000474642 GCC2Q8IWJ2 1684 aa20.77■□□□□ 0.91
RTN4R-206ENST00000474642 NUTM2DQ5VT03 806 aaPredicted RBP20.76■□□□□ 0.91
RTN4R-206ENST00000474642 APLP2Q06481 763 aa20.74■□□□□ 0.91
RTN4R-206ENST00000474642 TMEM131LA2VDJ0 1609 aa20.74■□□□□ 0.91
RTN4R-206ENST00000474642 PIK3R4Q99570 1358 aa20.73■□□□□ 0.91
RTN4R-206ENST00000474642 ADAMTS13Q76LX8 1427 aa20.73■□□□□ 0.91
RTN4R-206ENST00000474642 QTRT2Q9H974 415 aaKnown RBP20.73■□□□□ 0.91
RTN4R-206ENST00000474642 DIP2AQ14689 1571 aa20.72■□□□□ 0.91
RTN4R-206ENST00000474642 RBM6P78332 1123 aaKnown RBP20.72■□□□□ 0.91
RTN4R-206ENST00000474642 AMOTL2Q9Y2J4 779 aa20.72■□□□□ 0.91
RTN4R-206ENST00000474642 C8orf37Q96NL8 207 aa20.71■□□□□ 0.91
RTN4R-206ENST00000474642 LRRC59Q96AG4 307 aaKnown RBP20.7■□□□□ 0.9
RTN4R-206ENST00000474642 RGS12O14924 1447 aa20.7■□□□□ 0.9
RTN4R-206ENST00000474642 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
RTN4R-206ENST00000474642 LOC105371045A0A1W2PR82 267 aa20.68■□□□□ 0.9
RTN4R-206ENST00000474642 ANKRD50Q9ULJ7 1429 aa20.68■□□□□ 0.9
RTN4R-206ENST00000474642 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
RTN4R-206ENST00000474642 DCCP43146 1447 aa20.67■□□□□ 0.9
RTN4R-206ENST00000474642 TRPM2O94759 1503 aa20.67■□□□□ 0.9
RTN4R-206ENST00000474642 ADGRL2O95490 1459 aa20.66■□□□□ 0.9
RTN4R-206ENST00000474642 SRCAPQ6ZRS2 3230 aa20.65■□□□□ 0.9
RTN4R-206ENST00000474642 PTPRUQ92729 1446 aa20.65■□□□□ 0.9
RTN4R-206ENST00000474642 NGLY1Q96IV0 654 aa20.64■□□□□ 0.89
RTN4R-206ENST00000474642 FOXD1Q16676 465 aa20.63■□□□□ 0.89
RTN4R-206ENST00000474642 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
RTN4R-206ENST00000474642 DDX17Q92841 729 aaKnown RBP20.62■□□□□ 0.89
RTN4R-206ENST00000474642 MST1RQ04912 1400 aa20.61■□□□□ 0.89
RTN4R-206ENST00000474642 ATAD2Q6PL18 1390 aa20.61■□□□□ 0.89
RTN4R-206ENST00000474642 PNPLA6Q8IY17 1366 aa20.61■□□□□ 0.89
RTN4R-206ENST00000474642 NHSL1Q5SYE7 1610 aa20.6■□□□□ 0.89
RTN4R-206ENST00000474642 ADAMTS2O95450 1211 aa20.6■□□□□ 0.89
RTN4R-206ENST00000474642 ZRANB1Q9UGI0 708 aa20.6■□□□□ 0.89
RTN4R-206ENST00000474642 UNC13BO14795 1591 aa20.57■□□□□ 0.88
RTN4R-206ENST00000474642 E9PCH4 1651 aa20.56■□□□□ 0.88
RTN4R-206ENST00000474642 USP21Q9UK80 565 aa20.55■□□□□ 0.88
RTN4R-206ENST00000474642 XRN1Q8IZH2 1706 aaKnown RBP20.54■□□□□ 0.88
RTN4R-206ENST00000474642 TRPC5Q9UL62 973 aaPredicted RBP20.54■□□□□ 0.88
RTN4R-206ENST00000474642 ZNF326Q5BKZ1 582 aaKnown RBP20.52■□□□□ 0.88
RTN4R-206ENST00000474642 ADGRL3Q9HAR2 1447 aa20.52■□□□□ 0.87
RTN4R-206ENST00000474642 METP08581 1390 aa20.5■□□□□ 0.87
RTN4R-206ENST00000474642 SETBP1Q9Y6X0 1596 aa20.5■□□□□ 0.87
RTN4R-206ENST00000474642 NRXN3Q9Y4C0 1643 aa20.49■□□□□ 0.87
RTN4R-206ENST00000474642 NUP155O75694 1391 aa20.47■□□□□ 0.87
RTN4R-206ENST00000474642 CCDC125Q86Z20 511 aa20.47■□□□□ 0.87
RTN4R-206ENST00000474642 FNBP4Q8N3X1 1017 aaPredicted RBP20.47■□□□□ 0.87
RTN4R-206ENST00000474642 C1orf167Q5SNV9 1468 aa20.47■□□□□ 0.87
RTN4R-206ENST00000474642 IQGAP3Q86VI3 1631 aa20.46■□□□□ 0.87
RTN4R-206ENST00000474642 PTCH1Q13635 1447 aa20.45■□□□□ 0.86
RTN4R-206ENST00000474642 SOS2Q07890 1332 aaPredicted RBP20.45■□□□□ 0.86
RTN4R-206ENST00000474642 ATRNO75882 1429 aa20.44■□□□□ 0.86
RTN4R-206ENST00000474642 NALCNQ8IZF0 1738 aa20.44■□□□□ 0.86
RTN4R-206ENST00000474642 ORAI2Q96SN7 254 aa20.44■□□□□ 0.86
RTN4R-206ENST00000474642 LAMC1P11047 1609 aa20.4■□□□□ 0.86
RTN4R-206ENST00000474642 ROCK1Q13464 1354 aa20.39■□□□□ 0.85
RTN4R-206ENST00000474642 EP400Q96L91 3159 aa20.38■□□□□ 0.85
RTN4R-206ENST00000474642 GJD4Q96KN9 370 aaPredicted RBP20.36■□□□□ 0.85
RTN4R-206ENST00000474642 SPHKAPQ2M3C7 1700 aa20.36■□□□□ 0.85
RTN4R-206ENST00000474642 BCL9LQ86UU0 1499 aa20.34■□□□□ 0.85
RTN4R-206ENST00000474642 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
RTN4R-206ENST00000474642 COL22A1Q8NFW1 1626 aaPredicted RBP20.33■□□□□ 0.84
RTN4R-206ENST00000474642 NEXMIFQ5QGS0 1516 aa20.32■□□□□ 0.84
RTN4R-206ENST00000474642 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
RTN4R-206ENST00000474642 MYOM2P54296 1465 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms