RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 UGGT1Q9NYU2 1555 aa29.8■■■□□ 2.36
CCM2-206ENST00000474617 SETBP1Q9Y6X0 1596 aa29.79■■■□□ 2.36
CCM2-206ENST00000474617 MROH2AA6NES4 1674 aa29.78■■■□□ 2.36
CCM2-206ENST00000474617 RALBP1Q15311 655 aa29.78■■■□□ 2.36
CCM2-206ENST00000474617 POLR3GLQ9BT43 218 aa29.76■■■□□ 2.36
CCM2-206ENST00000474617 SLC52A1Q9NWF4 448 aa29.76■■■□□ 2.35
CCM2-206ENST00000474617 PPLO60437 1756 aa29.75■■■□□ 2.35
CCM2-206ENST00000474617 MRS2Q9HD23 443 aa29.74■■■□□ 2.35
CCM2-206ENST00000474617 TSPOAP1O95153 1857 aa29.72■■■□□ 2.35
CCM2-206ENST00000474617 KIF13AQ9H1H9 1805 aa29.72■■■□□ 2.35
CCM2-206ENST00000474617 SYNMO15061 1565 aa29.71■■■□□ 2.35
CCM2-206ENST00000474617 DISP3Q9P2K9 1392 aa29.69■■■□□ 2.34
CCM2-206ENST00000474617 SBNO2Q9Y2G9 1366 aa29.69■■■□□ 2.34
CCM2-206ENST00000474617 SIGLEC1Q9BZZ2 1709 aa29.69■■■□□ 2.34
CCM2-206ENST00000474617 PIK3C2GO75747 1445 aa29.68■■■□□ 2.34
CCM2-206ENST00000474617 MYO3AQ8NEV4 1616 aa29.68■■■□□ 2.34
CCM2-206ENST00000474617 ZFYVE9O95405 1425 aa29.68■■■□□ 2.34
CCM2-206ENST00000474617 ARHGEF40Q8TER5 1519 aa29.67■■■□□ 2.34
CCM2-206ENST00000474617 BRD4O60885 1362 aaPredicted RBP29.65■■■□□ 2.34
CCM2-206ENST00000474617 PREX1Q8TCU6 1659 aa29.65■■■□□ 2.34
CCM2-206ENST00000474617 ADGRF5Q8IZF2 1346 aa29.65■■■□□ 2.34
CCM2-206ENST00000474617 MYBBP1AQ9BQG0 1328 aaKnown RBP29.64■■■□□ 2.34
CCM2-206ENST00000474617 VGFO15240 615 aaPredicted RBP29.62■■■□□ 2.33
CCM2-206ENST00000474617 HNRNPUQ00839 825 aaKnown RBP eCLIP29.62■■■□□ 2.33
CCM2-206ENST00000474617 PARD3Q8TEW0 1356 aa29.61■■■□□ 2.33
CCM2-206ENST00000474617 C14orf93Q9H972 538 aaKnown RBP29.61■■■□□ 2.33
CCM2-206ENST00000474617 NEXMIFQ5QGS0 1516 aa29.59■■■□□ 2.33
CCM2-206ENST00000474617 PER1O15534 1290 aaPredicted RBP29.59■■■□□ 2.33
CCM2-206ENST00000474617 CFAP65Q6ZU64 1925 aaKnown RBP29.58■■■□□ 2.33
CCM2-206ENST00000474617 CHGAP10645 457 aaKnown RBP29.58■■■□□ 2.33
CCM2-206ENST00000474617 CFAP70Q5T0N1 1121 aa29.58■■■□□ 2.33
CCM2-206ENST00000474617 KDM5AP29375 1690 aaKnown RBP29.57■■■□□ 2.32
CCM2-206ENST00000474617 ZBED9Q6R2W3 1325 aa29.57■■■□□ 2.32
CCM2-206ENST00000474617 ERVK-7P63135 1459 aa29.55■■■□□ 2.32
CCM2-206ENST00000474617 CCDC184Q52MB2 194 aa29.54■■■□□ 2.32
CCM2-206ENST00000474617 ADGRB1O14514 1584 aa29.54■■■□□ 2.32
CCM2-206ENST00000474617 NLRP13Q86W25 1043 aa29.53■■■□□ 2.32
CCM2-206ENST00000474617 TMC1Q8TDI8 760 aa29.53■■■□□ 2.32
CCM2-206ENST00000474617 INSRP06213 1382 aa29.52■■■□□ 2.32
CCM2-206ENST00000474617 TMEM131LA2VDJ0 1609 aa29.52■■■□□ 2.32
CCM2-206ENST00000474617 NPC1L1Q9UHC9 1359 aa29.51■■■□□ 2.32
CCM2-206ENST00000474617 IDI1Q13907 227 aa29.5■■■□□ 2.31
CCM2-206ENST00000474617 FAM9BQ8IZU0 186 aa29.5■■■□□ 2.31
CCM2-206ENST00000474617 PANK3Q9H999 370 aa29.5■■■□□ 2.31
CCM2-206ENST00000474617 SPATA31D1Q6ZQQ2 1576 aa29.49■■■□□ 2.31
CCM2-206ENST00000474617 PUS7Q96PZ0 661 aaKnown RBP29.48■■■□□ 2.31
CCM2-206ENST00000474617 CENPJQ9HC77 1338 aaPredicted RBP29.47■■■□□ 2.31
CCM2-206ENST00000474617 PNISRQ8TF01 805 aaKnown RBP29.46■■■□□ 2.31
CCM2-206ENST00000474617 NEFLP07196 543 aa29.45■■■□□ 2.31
CCM2-206ENST00000474617 LRPPRCP42704 1394 aaKnown RBP29.45■■■□□ 2.31
CCM2-206ENST00000474617 CLTCQ00610 1675 aaKnown RBP29.45■■■□□ 2.3
CCM2-206ENST00000474617 KNSTRNQ9Y448 316 aa29.43■■■□□ 2.3
CCM2-206ENST00000474617 MYOM1P52179 1685 aa29.43■■■□□ 2.3
CCM2-206ENST00000474617 SUPT16HQ9Y5B9 1047 aaKnown RBP29.41■■■□□ 2.3
CCM2-206ENST00000474617 ASXL1Q8IXJ9 1541 aa29.41■■■□□ 2.3
CCM2-206ENST00000474617 DNAJC5Q9H3Z4 198 aa29.39■■■□□ 2.3
CCM2-206ENST00000474617 PELP1Q8IZL8 1130 aaKnown RBP29.38■■■□□ 2.29
CCM2-206ENST00000474617 QRICH2Q9H0J4 1663 aa29.38■■■□□ 2.29
CCM2-206ENST00000474617 ESF1Q9H501 851 aaKnown RBP29.35■■■□□ 2.29
CCM2-206ENST00000474617 MYO5BQ9ULV0 1848 aa29.33■■■□□ 2.29
CCM2-206ENST00000474617 ARHGEF28Q8N1W1 1705 aaKnown RBP29.32■■■□□ 2.28
CCM2-206ENST00000474617 AMER1Q5JTC6 1135 aaPredicted RBP29.31■■■□□ 2.28
CCM2-206ENST00000474617 ERICH6BQ5W0A0 696 aa29.3■■■□□ 2.28
CCM2-206ENST00000474617 STAG3Q9UJ98 1225 aa29.29■■■□□ 2.28
CCM2-206ENST00000474617 A2ML1A8K2U0 1454 aa29.28■■■□□ 2.28
CCM2-206ENST00000474617 NINLQ9Y2I6 1382 aa29.28■■■□□ 2.28
CCM2-206ENST00000474617 FBXO31Q5XUX0 539 aaPredicted RBP29.28■■■□□ 2.28
CCM2-206ENST00000474617 TRAK1Q9UPV9 953 aa29.28■■■□□ 2.28
CCM2-206ENST00000474617 EVC2Q86UK5 1308 aa29.27■■■□□ 2.28
CCM2-206ENST00000474617 SMG6Q86US8 1419 aaKnown RBP29.26■■■□□ 2.28
CCM2-206ENST00000474617 CC2D1BQ5T0F9 858 aaKnown RBP29.26■■■□□ 2.27
CCM2-206ENST00000474617 ZMYM3Q14202 1370 aa29.26■■■□□ 2.27
CCM2-206ENST00000474617 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.25■■■□□ 2.27
CCM2-206ENST00000474617 HDGFP51858 240 aaKnown RBP29.24■■■□□ 2.27
CCM2-206ENST00000474617 CNGB1Q14028 1251 aaPredicted RBP29.24■■■□□ 2.27
CCM2-206ENST00000474617 USP32Q8NFA0 1604 aa29.22■■■□□ 2.27
CCM2-206ENST00000474617 TMEM132EQ6IEE7 984 aa29.21■■■□□ 2.27
CCM2-206ENST00000474617 ALKQ9UM73 1620 aa29.21■■■□□ 2.27
CCM2-206ENST00000474617 FKBP8Q14318 412 aa29.2■■■□□ 2.27
CCM2-206ENST00000474617 DLC1Q96QB1 1528 aa29.2■■■□□ 2.26
CCM2-206ENST00000474617 RIMS2Q9UQ26 1411 aa29.2■■■□□ 2.26
CCM2-206ENST00000474617 YTHDC2Q9H6S0 1430 aaKnown RBP29.19■■■□□ 2.26
CCM2-206ENST00000474617 BLMP54132 1417 aaPredicted RBP29.18■■■□□ 2.26
CCM2-206ENST00000474617 PDE3BQ13370 1112 aa29.18■■■□□ 2.26
CCM2-206ENST00000474617 PPP2R1AP30153 589 aa29.16■■■□□ 2.26
CCM2-206ENST00000474617 TNRQ92752 1358 aa29.16■■■□□ 2.26
CCM2-206ENST00000474617 PTPRMP28827 1452 aa29.15■■■□□ 2.26
CCM2-206ENST00000474617 MLECQ14165 292 aa29.15■■■□□ 2.26
CCM2-206ENST00000474617 NUDCQ9Y266 331 aa29.15■■■□□ 2.26
CCM2-206ENST00000474617 TULP4Q9NRJ4 1543 aa29.14■■■□□ 2.26
CCM2-206ENST00000474617 NSD2O96028 1365 aa29.13■■■□□ 2.25
CCM2-206ENST00000474617 ATAD2Q6PL18 1390 aa29.12■■■□□ 2.25
CCM2-206ENST00000474617 NLRP1Q9C000 1473 aa29.12■■■□□ 2.25
CCM2-206ENST00000474617 NUTM2DQ5VT03 806 aaPredicted RBP29.11■■■□□ 2.25
CCM2-206ENST00000474617 ANKRD36BQ8N2N9 1353 aa29.1■■■□□ 2.25
CCM2-206ENST00000474617 CARD14Q9BXL6 1004 aa29.07■■■□□ 2.24
CCM2-206ENST00000474617 SETD1AO15047 1707 aaKnown RBP29.07■■■□□ 2.24
CCM2-206ENST00000474617 ABCC11Q96J66 1382 aa29.06■■■□□ 2.24
CCM2-206ENST00000474617 NSD3Q9BZ95 1437 aa29.05■■■□□ 2.24
CCM2-206ENST00000474617 CGNL1Q0VF96 1302 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms