RNA–Protein interactions for RNA: ENST00000472765.6

CCT3-211, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2 BASIC

Gene CCT3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-211ENST00000472765 SPHKAPQ2M3C7 1700 aa17.22■□□□□ 0.35
CCT3-211ENST00000472765 MYOM1P52179 1685 aa17.22■□□□□ 0.35
CCT3-211ENST00000472765 ASXL1Q8IXJ9 1541 aa17.21■□□□□ 0.35
CCT3-211ENST00000472765 ADAMTS8Q9UP79 889 aa17.21■□□□□ 0.35
CCT3-211ENST00000472765 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
CCT3-211ENST00000472765 PPP2R1AP30153 589 aa17.2■□□□□ 0.34
CCT3-211ENST00000472765 WDR43Q15061 677 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCT3-211ENST00000472765 TRMT2AQ8IZ69 625 aaKnown RBP17.2■□□□□ 0.34
CCT3-211ENST00000472765 KIAA1210Q9ULL0 1709 aa17.19■□□□□ 0.34
CCT3-211ENST00000472765 CEP152O94986 1710 aa17.18■□□□□ 0.34
CCT3-211ENST00000472765 SKAP1Q86WV1 359 aa17.18■□□□□ 0.34
CCT3-211ENST00000472765 NINLQ9Y2I6 1382 aa17.18■□□□□ 0.34
CCT3-211ENST00000472765 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
CCT3-211ENST00000472765 FRAT1Q92837 279 aaPredicted RBP17.18■□□□□ 0.34
CCT3-211ENST00000472765 SCAPERQ9BY12 1400 aa17.18■□□□□ 0.34
CCT3-211ENST00000472765 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
CCT3-211ENST00000472765 NGEFQ8N5V2 710 aa17.17■□□□□ 0.34
CCT3-211ENST00000472765 RTN4Q9NQC3 1192 aaKnown RBP17.17■□□□□ 0.34
CCT3-211ENST00000472765 NKTRP30414 1462 aaKnown RBP17.17■□□□□ 0.34
CCT3-211ENST00000472765 TTC37Q6PGP7 1564 aa17.16■□□□□ 0.34
CCT3-211ENST00000472765 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
CCT3-211ENST00000472765 KDM5AP29375 1690 aaKnown RBP17.16■□□□□ 0.34
CCT3-211ENST00000472765 RGL3Q3MIN7 710 aa17.16■□□□□ 0.34
CCT3-211ENST00000472765 BRPF3Q9ULD4 1205 aa17.16■□□□□ 0.34
CCT3-211ENST00000472765 KNSTRNQ9Y448 316 aa17.16■□□□□ 0.34
CCT3-211ENST00000472765 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
CCT3-211ENST00000472765 AMER1Q5JTC6 1135 aaPredicted RBP17.15■□□□□ 0.34
CCT3-211ENST00000472765 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
CCT3-211ENST00000472765 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
CCT3-211ENST00000472765 TRPM2O94759 1503 aa17.14■□□□□ 0.33
CCT3-211ENST00000472765 NEURL4Q96JN8 1562 aa17.13■□□□□ 0.33
CCT3-211ENST00000472765 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCT3-211ENST00000472765 ZMYM3Q14202 1370 aa17.12■□□□□ 0.33
CCT3-211ENST00000472765 SLC4A3P48751 1232 aa17.12■□□□□ 0.33
CCT3-211ENST00000472765 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
CCT3-211ENST00000472765 MAPK8IP3Q9UPT6 1336 aa17.1■□□□□ 0.33
CCT3-211ENST00000472765 SHROOM2Q13796 1616 aa17.09■□□□□ 0.33
CCT3-211ENST00000472765 FAM43AQ8N2R8 423 aa17.09■□□□□ 0.33
CCT3-211ENST00000472765 E9PSI1 815 aa17.08■□□□□ 0.33
CCT3-211ENST00000472765 PDE3AQ14432 1141 aa17.08■□□□□ 0.33
CCT3-211ENST00000472765 FRAT2O75474 233 aaPredicted RBP17.07■□□□□ 0.32
CCT3-211ENST00000472765 AAMPQ13685 434 aa17.07■□□□□ 0.32
CCT3-211ENST00000472765 USP19O94966 1318 aa17.06■□□□□ 0.32
CCT3-211ENST00000472765 DEPDC5O75140 1603 aa17.06■□□□□ 0.32
CCT3-211ENST00000472765 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
CCT3-211ENST00000472765 RGS3P49796 1198 aa17.05■□□□□ 0.32
CCT3-211ENST00000472765 PTPRTO14522 1441 aa17.05■□□□□ 0.32
CCT3-211ENST00000472765 BECN1Q14457 450 aa17.05■□□□□ 0.32
CCT3-211ENST00000472765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.321e-8■■□□□ 13.3
CCT3-211ENST00000472765 CLTCL1P53675 1640 aa17.05■□□□□ 0.32
CCT3-211ENST00000472765 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
CCT3-211ENST00000472765 TET3O43151 1660 aa17.04■□□□□ 0.32
CCT3-211ENST00000472765 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
CCT3-211ENST00000472765 ABCC1P33527 1531 aa17.03■□□□□ 0.32
CCT3-211ENST00000472765 FBLN2P98095 1184 aa17.02■□□□□ 0.32
CCT3-211ENST00000472765 RSPH6AQ9H0K4 717 aa17.01■□□□□ 0.31
CCT3-211ENST00000472765 SHPRHQ149N8 1683 aa17■□□□□ 0.31
CCT3-211ENST00000472765 MYOM2P54296 1465 aa16.99■□□□□ 0.31
CCT3-211ENST00000472765 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
CCT3-211ENST00000472765 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.99■□□□□ 0.31
CCT3-211ENST00000472765 POLR3AO14802 1390 aaPredicted RBP16.99■□□□□ 0.31
CCT3-211ENST00000472765 APAF1O14727 1248 aa16.99■□□□□ 0.31
CCT3-211ENST00000472765 IGHDP01880 384 aa16.99■□□□□ 0.31
CCT3-211ENST00000472765 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
CCT3-211ENST00000472765 CENPJQ9HC77 1338 aaPredicted RBP16.98■□□□□ 0.31
CCT3-211ENST00000472765 BCAR3O75815 825 aa16.98■□□□□ 0.31
CCT3-211ENST00000472765 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
CCT3-211ENST00000472765 IFT172Q9UG01 1749 aa16.98■□□□□ 0.31
CCT3-211ENST00000472765 MAP3K4Q9Y6R4 1608 aa16.98■□□□□ 0.31
CCT3-211ENST00000472765 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
CCT3-211ENST00000472765 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
CCT3-211ENST00000472765 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
CCT3-211ENST00000472765 PLCH2O75038 1416 aa16.97■□□□□ 0.31
CCT3-211ENST00000472765 ABCA6Q8N139 1617 aa16.97■□□□□ 0.31
CCT3-211ENST00000472765 PMFBP1Q8TBY8 1022 aa16.97■□□□□ 0.31
CCT3-211ENST00000472765 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
CCT3-211ENST00000472765 IQSEC2Q5JU85 1478 aa16.96■□□□□ 0.31
CCT3-211ENST00000472765 USP32Q8NFA0 1604 aa16.96■□□□□ 0.3
CCT3-211ENST00000472765 ARAP3Q8WWN8 1544 aa16.95■□□□□ 0.3
CCT3-211ENST00000472765 UBE2Q2Q8WVN8 375 aa16.95■□□□□ 0.3
CCT3-211ENST00000472765 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
CCT3-211ENST00000472765 ANTXR1Q9H6X2 564 aa16.94■□□□□ 0.3
CCT3-211ENST00000472765 ZFYVE16Q7Z3T8 1539 aa16.94■□□□□ 0.3
CCT3-211ENST00000472765 KIF1BO60333 1816 aa16.92■□□□□ 0.3
CCT3-211ENST00000472765 ZC3H13Q5T200 1668 aaKnown RBP16.92■□□□□ 0.3
CCT3-211ENST00000472765 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
CCT3-211ENST00000472765 UPF2Q9HAU5 1272 aaKnown RBP16.92■□□□□ 0.3
CCT3-211ENST00000472765 TBC1D32Q96NH3 1257 aa16.91■□□□□ 0.3
CCT3-211ENST00000472765 KANK1Q14678 1352 aa16.91■□□□□ 0.3
CCT3-211ENST00000472765 WWC1Q8IX03 1113 aa16.9■□□□□ 0.3
CCT3-211ENST00000472765 CHD1O14646 1710 aa16.9■□□□□ 0.3
CCT3-211ENST00000472765 SETBP1Q9Y6X0 1596 aa16.9■□□□□ 0.3
CCT3-211ENST00000472765 CANXP27824 592 aaKnown RBP16.9■□□□□ 0.3
CCT3-211ENST00000472765 POGKQ9P215 609 aa16.9■□□□□ 0.3
CCT3-211ENST00000472765 SEC24BO95487 1268 aa16.89■□□□□ 0.29
CCT3-211ENST00000472765 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
CCT3-211ENST00000472765 NRXN1Q9ULB1 1477 aa16.89■□□□□ 0.29
CCT3-211ENST00000472765 ZCCHC11Q5TAX3 1644 aaKnown RBP16.89■□□□□ 0.29
CCT3-211ENST00000472765 EFCAB2Q5VUJ9 269 aa16.88■□□□□ 0.29
CCT3-211ENST00000472765 PHF23Q9BUL5 403 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms