RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 KDM2AQ9Y2K7 1162 aa31.89■■■□□ 2.7
PAXBP1-208ENST00000472588 A2ML1A8K2U0 1454 aa31.88■■■□□ 2.69
PAXBP1-208ENST00000472588 UBR1Q8IWV7 1749 aa31.88■■■□□ 2.69
PAXBP1-208ENST00000472588 PPLO60437 1756 aa31.87■■■□□ 2.69
PAXBP1-208ENST00000472588 MYOM2P54296 1465 aa31.85■■■□□ 2.69
PAXBP1-208ENST00000472588 HDGFP51858 240 aaKnown RBP31.83■■■□□ 2.69
PAXBP1-208ENST00000472588 NEXMIFQ5QGS0 1516 aa31.82■■■□□ 2.68
PAXBP1-208ENST00000472588 VGFO15240 615 aaPredicted RBP31.82■■■□□ 2.68
PAXBP1-208ENST00000472588 THEMISQ8N1K5 641 aaPredicted RBP31.8■■■□□ 2.68
PAXBP1-208ENST00000472588 PRAG1Q86YV5 1406 aa31.8■■■□□ 2.68
PAXBP1-208ENST00000472588 ZFYVE9O95405 1425 aa31.78■■■□□ 2.68
PAXBP1-208ENST00000472588 STRCQ7RTU9 1775 aa31.78■■■□□ 2.68
PAXBP1-208ENST00000472588 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.77■■■□□ 2.68
PAXBP1-208ENST00000472588 NBPF8Q3BBV2 869 aa31.76■■■□□ 2.68
PAXBP1-208ENST00000472588 TMEM2Q9UHN6 1383 aa31.74■■■□□ 2.67
PAXBP1-208ENST00000472588 RIMS2Q9UQ26 1411 aa31.74■■■□□ 2.67
PAXBP1-208ENST00000472588 NRXN1Q9ULB1 1477 aa31.73■■■□□ 2.67
PAXBP1-208ENST00000472588 SLIT1O75093 1534 aa31.7■■■□□ 2.67
PAXBP1-208ENST00000472588 ADGRF5Q8IZF2 1346 aa31.7■■■□□ 2.67
PAXBP1-208ENST00000472588 TRPM1Q7Z4N2 1603 aa31.7■■■□□ 2.66
PAXBP1-208ENST00000472588 RALGAPBQ86X10 1494 aa31.69■■■□□ 2.66
PAXBP1-208ENST00000472588 KIAA1210Q9ULL0 1709 aa31.69■■■□□ 2.66
PAXBP1-208ENST00000472588 EID1Q9Y6B2 187 aa31.68■■■□□ 2.66
PAXBP1-208ENST00000472588 ARHGAP23Q9P227 1491 aa31.67■■■□□ 2.66
PAXBP1-208ENST00000472588 PIK3C2GO75747 1445 aa31.67■■■□□ 2.66
PAXBP1-208ENST00000472588 NUTM2DQ5VT03 806 aaPredicted RBP31.64■■■□□ 2.66
PAXBP1-208ENST00000472588 LAMC1P11047 1609 aa31.63■■■□□ 2.65
PAXBP1-208ENST00000472588 POLR1AO95602 1720 aaPredicted RBP31.62■■■□□ 2.65
PAXBP1-208ENST00000472588 ROCK2O75116 1388 aaKnown RBP31.62■■■□□ 2.65
PAXBP1-208ENST00000472588 TXNDC2Q86VQ3 553 aa31.6■■■□□ 2.65
PAXBP1-208ENST00000472588 NCKAP5LQ9HCH0 1330 aa31.59■■■□□ 2.65
PAXBP1-208ENST00000472588 C14orf93Q9H972 538 aaKnown RBP31.58■■■□□ 2.65
PAXBP1-208ENST00000472588 GPRASP1Q5JY77 1395 aa31.57■■■□□ 2.64
PAXBP1-208ENST00000472588 CARD11Q9BXL7 1154 aa31.57■■■□□ 2.64
PAXBP1-208ENST00000472588 DMRT2Q9Y5R5 561 aa31.57■■■□□ 2.64
PAXBP1-208ENST00000472588 SCAF11Q99590 1463 aaKnown RBP31.56■■■□□ 2.64
PAXBP1-208ENST00000472588 CFAP70Q5T0N1 1121 aa31.55■■■□□ 2.64
PAXBP1-208ENST00000472588 ANKLE2Q86XL3 938 aa31.55■■■□□ 2.64
PAXBP1-208ENST00000472588 PLEKHG1Q9ULL1 1385 aa31.54■■■□□ 2.64
PAXBP1-208ENST00000472588 SETBP1Q9Y6X0 1596 aa31.54■■■□□ 2.64
PAXBP1-208ENST00000472588 LTKP29376 864 aa31.54■■■□□ 2.64
PAXBP1-208ENST00000472588 NBPF1Q3BBV0 1214 aa31.53■■■□□ 2.64
PAXBP1-208ENST00000472588 EIF4G2P78344 907 aaKnown RBP eCLIP31.51■■■□□ 2.64
PAXBP1-208ENST00000472588 BCANQ96GW7 911 aa31.5■■■□□ 2.63
PAXBP1-208ENST00000472588 ALKQ9UM73 1620 aa31.5■■■□□ 2.63
PAXBP1-208ENST00000472588 NRXN3Q9Y4C0 1643 aa31.46■■■□□ 2.63
PAXBP1-208ENST00000472588 IQGAP1P46940 1657 aa31.46■■■□□ 2.63
PAXBP1-208ENST00000472588 USP47Q96K76 1375 aa31.44■■■□□ 2.62
PAXBP1-208ENST00000472588 MED14O60244 1454 aa31.43■■■□□ 2.62
PAXBP1-208ENST00000472588 ADGRB1O14514 1584 aa31.43■■■□□ 2.62
PAXBP1-208ENST00000472588 DIP2AQ14689 1571 aa31.42■■■□□ 2.62
PAXBP1-208ENST00000472588 SETD1AO15047 1707 aaKnown RBP31.41■■■□□ 2.62
PAXBP1-208ENST00000472588 NPHP4O75161 1426 aaPredicted RBP31.41■■■□□ 2.62
PAXBP1-208ENST00000472588 EIF3AQ14152 1382 aaKnown RBP31.39■■■□□ 2.62
PAXBP1-208ENST00000472588 ADAMTS13Q76LX8 1427 aa31.39■■■□□ 2.62
PAXBP1-208ENST00000472588 SENP3Q9H4L4 574 aaPredicted RBP31.39■■■□□ 2.62
PAXBP1-208ENST00000472588 HSPA5P11021 654 aaKnown RBP31.38■■■□□ 2.61
PAXBP1-208ENST00000472588 TMEM132EQ6IEE7 984 aa31.38■■■□□ 2.61
PAXBP1-208ENST00000472588 TBX22Q9Y458 520 aa31.38■■■□□ 2.61
PAXBP1-208ENST00000472588 ZNF316A6NFI3 1004 aaPredicted RBP31.37■■■□□ 2.61
PAXBP1-208ENST00000472588 ASXL1Q8IXJ9 1541 aa31.34■■■□□ 2.61
PAXBP1-208ENST00000472588 YTHDC2Q9H6S0 1430 aaKnown RBP31.33■■■□□ 2.61
PAXBP1-208ENST00000472588 SLC26A8Q96RN1 970 aa31.32■■■□□ 2.6
PAXBP1-208ENST00000472588 METP08581 1390 aa31.3■■■□□ 2.6
PAXBP1-208ENST00000472588 PIK3R4Q99570 1358 aa31.3■■■□□ 2.6
PAXBP1-208ENST00000472588 ST20-MTHFSA0A0A6YYL1 179 aa31.29■■■□□ 2.6
PAXBP1-208ENST00000472588 TRAK1Q9UPV9 953 aa31.29■■■□□ 2.6
PAXBP1-208ENST00000472588 LRPPRCP42704 1394 aaKnown RBP31.29■■■□□ 2.6
PAXBP1-208ENST00000472588 SLC24A1O60721 1099 aa31.28■■■□□ 2.6
PAXBP1-208ENST00000472588 HIRIP3Q9BW71 556 aaPredicted RBP31.26■■■□□ 2.6
PAXBP1-208ENST00000472588 ZNF335Q9H4Z2 1342 aaPredicted RBP31.26■■■□□ 2.6
PAXBP1-208ENST00000472588 ABCC11Q96J66 1382 aa31.26■■■□□ 2.6
PAXBP1-208ENST00000472588 LTBP4Q8N2S1 1624 aa31.26■■■□□ 2.59
PAXBP1-208ENST00000472588 STK26Q9P289 416 aa31.24■■■□□ 2.59
PAXBP1-208ENST00000472588 KNDC1Q76NI1 1749 aa31.24■■■□□ 2.59
PAXBP1-208ENST00000472588 ARHGEF28Q8N1W1 1705 aaKnown RBP31.24■■■□□ 2.59
PAXBP1-208ENST00000472588 DLC1Q96QB1 1528 aa31.24■■■□□ 2.59
PAXBP1-208ENST00000472588 CENPJQ9HC77 1338 aaPredicted RBP31.21■■■□□ 2.59
PAXBP1-208ENST00000472588 SIRT1Q96EB6 747 aa31.21■■■□□ 2.59
PAXBP1-208ENST00000472588 TECPR2O15040 1411 aa31.21■■■□□ 2.59
PAXBP1-208ENST00000472588 SBNO2Q9Y2G9 1366 aa31.17■■■□□ 2.58
PAXBP1-208ENST00000472588 CPS1P31327 1500 aa31.16■■■□□ 2.58
PAXBP1-208ENST00000472588 POGKQ9P215 609 aa31.16■■■□□ 2.58
PAXBP1-208ENST00000472588 CHD2O14647 1828 aaKnown RBP31.16■■■□□ 2.58
PAXBP1-208ENST00000472588 FAM135BQ49AJ0 1406 aa31.16■■■□□ 2.58
PAXBP1-208ENST00000472588 CERKQ8TCT0 537 aa31.15■■■□□ 2.58
PAXBP1-208ENST00000472588 AMOTL2Q9Y2J4 779 aa31.15■■■□□ 2.58
PAXBP1-208ENST00000472588 QRICH2Q9H0J4 1663 aa31.15■■■□□ 2.58
PAXBP1-208ENST00000472588 TESK2Q96S53 571 aa31.15■■■□□ 2.58
PAXBP1-208ENST00000472588 STRCP1A6NGW2 1772 aa31.15■■■□□ 2.58
PAXBP1-208ENST00000472588 TMF1P82094 1093 aa31.14■■■□□ 2.58
PAXBP1-208ENST00000472588 PTPRUQ92729 1446 aa31.13■■■□□ 2.57
PAXBP1-208ENST00000472588 PRAM1Q96QH2 718 aa31.13■■■□□ 2.57
PAXBP1-208ENST00000472588 XRN1Q8IZH2 1706 aaKnown RBP31.12■■■□□ 2.57
PAXBP1-208ENST00000472588 PTCH1Q13635 1447 aa31.11■■■□□ 2.57
PAXBP1-208ENST00000472588 CDCA8Q53HL2 280 aa31.09■■■□□ 2.57
PAXBP1-208ENST00000472588 KCNA6P17658 529 aa31.07■■■□□ 2.57
PAXBP1-208ENST00000472588 NWD1Q149M9 1564 aa31.05■■■□□ 2.56
PAXBP1-208ENST00000472588 ROBO2Q9HCK4 1378 aa31.05■■■□□ 2.56
PAXBP1-208ENST00000472588 WAPLQ7Z5K2 1190 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms