RNA–Protein interactions for RNA: ENST00000472098.5

MDH1-210, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-210ENST00000472098 GPBP1L1Q9HC44 474 aaPredicted RBP13.8□□□□□ -0.2
MDH1-210ENST00000472098 BCAMP50895 628 aa13.79□□□□□ -0.2
MDH1-210ENST00000472098 TTLL12Q14166 644 aaPredicted RBP13.79□□□□□ -0.2
MDH1-210ENST00000472098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.78□□□□□ -0.2
MDH1-210ENST00000472098 CLCN1P35523 988 aa13.78□□□□□ -0.2
MDH1-210ENST00000472098 RCCD1A6NED2 376 aa13.77□□□□□ -0.21
MDH1-210ENST00000472098 SMAPO00193 183 aa13.77□□□□□ -0.21
MDH1-210ENST00000472098 MDM2Q00987 491 aaPredicted RBP13.77□□□□□ -0.21
MDH1-210ENST00000472098 KDM4CQ9H3R0 1056 aa13.77□□□□□ -0.21
MDH1-210ENST00000472098 TMUB1Q9BVT8 246 aa13.76□□□□□ -0.21
MDH1-210ENST00000472098 DNAJB2P25686 324 aa13.75□□□□□ -0.21
MDH1-210ENST00000472098 ANKK1Q8NFD2 765 aa13.75□□□□□ -0.21
MDH1-210ENST00000472098 NLRP7Q8WX94 980 aa13.75□□□□□ -0.21
MDH1-210ENST00000472098 GPCPD1Q9NPB8 672 aa13.75□□□□□ -0.21
MDH1-210ENST00000472098 SOWAHBA6NEL2 793 aa13.74□□□□□ -0.21
MDH1-210ENST00000472098 REPIN1Q9BWE0 567 aaKnown RBP13.74□□□□□ -0.21
MDH1-210ENST00000472098 GIGYF2Q6Y7W6 1299 aaKnown RBP13.73□□□□□ -0.21
MDH1-210ENST00000472098 LAPTM4BQ86VI4 370 aa13.73□□□□□ -0.21
MDH1-210ENST00000472098 SEPT9Q9UHD8 586 aaPredicted RBP13.73□□□□□ -0.21
MDH1-210ENST00000472098 FAM98CQ17RN3 349 aaKnown RBP13.71□□□□□ -0.21
MDH1-210ENST00000472098 ZFRQ96KR1 1074 aaKnown RBP13.71□□□□□ -0.21
MDH1-210ENST00000472098 TMEM134Q9H6X4 195 aa13.71□□□□□ -0.21
MDH1-210ENST00000472098 WBP1LQ9NX94 342 aa13.7□□□□□ -0.22
MDH1-210ENST00000472098 DAXXQ9UER7 740 aaPredicted RBP13.7□□□□□ -0.22
MDH1-210ENST00000472098 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
MDH1-210ENST00000472098 MS4A1P11836 297 aa13.65□□□□□ -0.22
MDH1-210ENST00000472098 SSTR3P32745 418 aaPredicted RBP13.65□□□□□ -0.22
MDH1-210ENST00000472098 HDGFP51858 240 aaKnown RBP13.63□□□□□ -0.23
MDH1-210ENST00000472098 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
MDH1-210ENST00000472098 NYAP1Q6ZVC0 841 aa13.63□□□□□ -0.23
MDH1-210ENST00000472098 FAM117AQ9C073 453 aa13.63□□□□□ -0.23
MDH1-210ENST00000472098 SWT1Q5T5J6 900 aaKnown RBP13.62□□□□□ -0.23
MDH1-210ENST00000472098 SULF1Q8IWU6 871 aa13.62□□□□□ -0.23
MDH1-210ENST00000472098 DDRGK1Q96HY6 314 aa13.62□□□□□ -0.23
MDH1-210ENST00000472098 IL27Q8NEV9 243 aa13.6□□□□□ -0.23
MDH1-210ENST00000472098 SAMD7Q7Z3H4 446 aa13.59□□□□□ -0.23
MDH1-210ENST00000472098 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
MDH1-210ENST00000472098 LCE2BO14633 110 aa13.57□□□□□ -0.24
MDH1-210ENST00000472098 SLC4A3P48751 1232 aa13.57□□□□□ -0.24
MDH1-210ENST00000472098 KCNC4Q03721 635 aa13.57□□□□□ -0.24
MDH1-210ENST00000472098 BEGAINQ9BUH8 593 aa13.57□□□□□ -0.24
MDH1-210ENST00000472098 PLEKHG3A1L390 1219 aa13.56□□□□□ -0.24
MDH1-210ENST00000472098 CD46P15529 392 aa13.56□□□□□ -0.24
MDH1-210ENST00000472098 SLF2Q8IX21 1173 aa13.56□□□□□ -0.24
MDH1-210ENST00000472098 RSPH4AQ5TD94 716 aa13.55□□□□□ -0.24
MDH1-210ENST00000472098 LRCH3Q96II8 777 aa13.54□□□□□ -0.24
MDH1-210ENST00000472098 TSR3Q9UJK0 312 aaKnown RBP13.54□□□□□ -0.24
MDH1-210ENST00000472098 RDH13Q8NBN7 331 aa13.53□□□□□ -0.24
MDH1-210ENST00000472098 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.53□□□□□ -0.24
MDH1-210ENST00000472098 HPS5Q9UPZ3 1129 aa13.53□□□□□ -0.24
MDH1-210ENST00000472098 SLC10A3P09131 477 aa13.51□□□□□ -0.25
MDH1-210ENST00000472098 Q6ZNB5 142 aa13.5□□□□□ -0.25
MDH1-210ENST00000472098 RNF40O75150 1001 aa13.49□□□□□ -0.25
MDH1-210ENST00000472098 NECTIN2Q92692 538 aa13.47□□□□□ -0.25
MDH1-210ENST00000472098 GCGRP47871 477 aa13.46□□□□□ -0.25
MDH1-210ENST00000472098 DIXDC1Q155Q3 683 aa13.46□□□□□ -0.25
MDH1-210ENST00000472098 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.25
MDH1-210ENST00000472098 TJAP1Q5JTD0 557 aa13.45□□□□□ -0.26
MDH1-210ENST00000472098 GOPCQ9HD26 462 aa13.45□□□□□ -0.26
MDH1-210ENST00000472098 NUTM1Q86Y26 1132 aa13.44□□□□□ -0.26
MDH1-210ENST00000472098 TBC1D2Q9BYX2 928 aa13.44□□□□□ -0.26
MDH1-210ENST00000472098 SH3D19Q5HYK7 790 aa13.43□□□□□ -0.26
MDH1-210ENST00000472098 SPIRE2Q8WWL2 714 aa13.43□□□□□ -0.26
MDH1-210ENST00000472098 KDM4AO75164 1064 aa13.42□□□□□ -0.26
MDH1-210ENST00000472098 CFHP08603 1231 aa13.42□□□□□ -0.26
MDH1-210ENST00000472098 PPP4CP60510 307 aa13.41□□□□□ -0.26
MDH1-210ENST00000472098 USP46P62068 366 aa13.41□□□□□ -0.26
MDH1-210ENST00000472098 MYSM1Q5VVJ2 828 aa13.4□□□□□ -0.26
MDH1-210ENST00000472098 SKIV2LQ15477 1246 aaKnown RBP13.39□□□□□ -0.27
MDH1-210ENST00000472098 KMT5BQ4FZB7 885 aa13.39□□□□□ -0.27
MDH1-210ENST00000472098 PRR14Q9BWN1 585 aa13.37□□□□□ -0.27
MDH1-210ENST00000472098 PCMTD1Q96MG8 357 aaPredicted RBP13.36□□□□□ -0.27
MDH1-210ENST00000472098 LAPTM4AQ15012 233 aa13.35□□□□□ -0.27
MDH1-210ENST00000472098 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
MDH1-210ENST00000472098 MOXD2PA6NHM9 499 aa13.34□□□□□ -0.27
MDH1-210ENST00000472098 HOXA2O43364 376 aa13.34□□□□□ -0.27
MDH1-210ENST00000472098 ACTN4O43707 911 aaKnown RBP13.34□□□□□ -0.27
MDH1-210ENST00000472098 GFRA3O60609 400 aa13.34□□□□□ -0.27
MDH1-210ENST00000472098 FUT2Q10981 343 aa13.34□□□□□ -0.27
MDH1-210ENST00000472098 MTRQ99707 1265 aa13.34□□□□□ -0.27
MDH1-210ENST00000472098 SPTLC1O15269 473 aa13.33□□□□□ -0.28
MDH1-210ENST00000472098 GJA5P36382 358 aa13.33□□□□□ -0.28
MDH1-210ENST00000472098 CLK2P49760 499 aaKnown RBP13.33□□□□□ -0.28
MDH1-210ENST00000472098 GRIPAP1Q4V328 841 aa13.33□□□□□ -0.28
MDH1-210ENST00000472098 RIC3Q7Z5B4 369 aa13.33□□□□□ -0.28
MDH1-210ENST00000472098 APLP1P51693 650 aa13.32□□□□□ -0.28
MDH1-210ENST00000472098 RSBN1LQ6PCB5 846 aaPredicted RBP13.32□□□□□ -0.28
MDH1-210ENST00000472098 PRKD2Q9BZL6 878 aa13.32□□□□□ -0.28
MDH1-210ENST00000472098 NDUFV2P19404 249 aa13.31□□□□□ -0.28
MDH1-210ENST00000472098 ATP6V1AP38606 617 aa13.31□□□□□ -0.28
MDH1-210ENST00000472098 PPP1R18Q6NYC8 613 aa13.31□□□□□ -0.28
MDH1-210ENST00000472098 ZNF516Q92618 1163 aa13.31□□□□□ -0.28
MDH1-210ENST00000472098 TRAF7Q6Q0C0 670 aa13.3□□□□□ -0.28
MDH1-210ENST00000472098 LIMD1Q9UGP4 676 aa13.3□□□□□ -0.28
MDH1-210ENST00000472098 TUSC1Q2TAM9 212 aa13.29□□□□□ -0.28
MDH1-210ENST00000472098 PROCA1Q8NCQ7 364 aaPredicted RBP13.29□□□□□ -0.28
MDH1-210ENST00000472098 IL21Q9HBE4 155 aa13.29□□□□□ -0.28
MDH1-210ENST00000472098 FDX1P10109 184 aa13.27□□□□□ -0.29
MDH1-210ENST00000472098 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
MDH1-210ENST00000472098 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms