RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 KDM4FA0A1W2PPD8 638 aa27.86■■■□□ 2.05
CHMP2B-204ENST00000472024 NBPF8Q3BBV2 869 aa27.84■■■□□ 2.05
CHMP2B-204ENST00000472024 RALGAPBQ86X10 1494 aa27.83■■■□□ 2.04
CHMP2B-204ENST00000472024 CEP170BQ9Y4F5 1589 aaPredicted RBP27.82■■■□□ 2.04
CHMP2B-204ENST00000472024 CHGAP10645 457 aaKnown RBP27.81■■■□□ 2.04
CHMP2B-204ENST00000472024 ARHGAP23Q9P227 1491 aa27.8■■■□□ 2.04
CHMP2B-204ENST00000472024 SLIT1O75093 1534 aa27.8■■■□□ 2.04
CHMP2B-204ENST00000472024 KIAA1210Q9ULL0 1709 aa27.78■■■□□ 2.04
CHMP2B-204ENST00000472024 ZNF326Q5BKZ1 582 aaKnown RBP27.78■■■□□ 2.04
CHMP2B-204ENST00000472024 TRPM1Q7Z4N2 1603 aa27.78■■■□□ 2.04
CHMP2B-204ENST00000472024 PIK3C2GO75747 1445 aa27.77■■■□□ 2.04
CHMP2B-204ENST00000472024 TMEM2Q9UHN6 1383 aa27.77■■■□□ 2.04
CHMP2B-204ENST00000472024 RIMS2Q9UQ26 1411 aa27.76■■■□□ 2.04
CHMP2B-204ENST00000472024 ILDR1Q86SU0 546 aaPredicted RBP27.76■■■□□ 2.03
CHMP2B-204ENST00000472024 GPRASP1Q5JY77 1395 aa27.75■■■□□ 2.03
CHMP2B-204ENST00000472024 VGFO15240 615 aaPredicted RBP27.75■■■□□ 2.03
CHMP2B-204ENST00000472024 STAG3Q9UJ98 1225 aa27.75■■■□□ 2.03
CHMP2B-204ENST00000472024 KDM2AQ9Y2K7 1162 aa27.75■■■□□ 2.03
CHMP2B-204ENST00000472024 ADGRF5Q8IZF2 1346 aa27.73■■■□□ 2.03
CHMP2B-204ENST00000472024 LAMC1P11047 1609 aa27.73■■■□□ 2.03
CHMP2B-204ENST00000472024 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.71■■■□□ 2.03
CHMP2B-204ENST00000472024 THEMISQ8N1K5 641 aaPredicted RBP27.7■■■□□ 2.02
CHMP2B-204ENST00000472024 HDGFP51858 240 aaKnown RBP27.67■■■□□ 2.02
CHMP2B-204ENST00000472024 PLPPR3Q6T4P5 718 aa27.67■■■□□ 2.02
CHMP2B-204ENST00000472024 SETBP1Q9Y6X0 1596 aa27.66■■■□□ 2.02
CHMP2B-204ENST00000472024 C14orf93Q9H972 538 aaKnown RBP27.64■■■□□ 2.02
CHMP2B-204ENST00000472024 PLEKHG1Q9ULL1 1385 aa27.61■■■□□ 2.01
CHMP2B-204ENST00000472024 ADGRB1O14514 1584 aa27.61■■■□□ 2.01
CHMP2B-204ENST00000472024 NRXN3Q9Y4C0 1643 aa27.61■■■□□ 2.01
CHMP2B-204ENST00000472024 ROCK2O75116 1388 aaKnown RBP27.6■■■□□ 2.01
CHMP2B-204ENST00000472024 SCAF11Q99590 1463 aaKnown RBP27.59■■■□□ 2.01
CHMP2B-204ENST00000472024 SETD1AO15047 1707 aaKnown RBP27.58■■■□□ 2.01
CHMP2B-204ENST00000472024 ALKQ9UM73 1620 aa27.57■■■□□ 2
CHMP2B-204ENST00000472024 LTKP29376 864 aa27.57■■■□□ 2
CHMP2B-204ENST00000472024 NBPF1Q3BBV0 1214 aa27.57■■■□□ 2
CHMP2B-204ENST00000472024 CFAP70Q5T0N1 1121 aa27.56■■■□□ 2
CHMP2B-204ENST00000472024 MED14O60244 1454 aa27.56■■■□□ 2
CHMP2B-204ENST00000472024 EID1Q9Y6B2 187 aa27.55■■■□□ 2
CHMP2B-204ENST00000472024 IQGAP1P46940 1657 aa27.55■■■□□ 2
CHMP2B-204ENST00000472024 NUTM2DQ5VT03 806 aaPredicted RBP27.54■■■□□ 2
CHMP2B-204ENST00000472024 ASXL1Q8IXJ9 1541 aa27.54■■■□□ 2
CHMP2B-204ENST00000472024 LMTK3Q96Q04 1460 aa27.53■■■□□ 2
CHMP2B-204ENST00000472024 TXNDC2Q86VQ3 553 aa27.53■■■□□ 2
CHMP2B-204ENST00000472024 CARD11Q9BXL7 1154 aa27.53■■■□□ 2
CHMP2B-204ENST00000472024 ADAMTS13Q76LX8 1427 aa27.52■■■□□ 2
CHMP2B-204ENST00000472024 DIP2AQ14689 1571 aa27.52■■■□□ 2
CHMP2B-204ENST00000472024 USP47Q96K76 1375 aa27.51■■□□□ 1.99
CHMP2B-204ENST00000472024 EIF4G2P78344 907 aaKnown RBP eCLIP27.51■■□□□ 1.99
CHMP2B-204ENST00000472024 ANKLE2Q86XL3 938 aa27.48■■□□□ 1.99
CHMP2B-204ENST00000472024 POLR1AO95602 1720 aaPredicted RBP27.47■■□□□ 1.99
CHMP2B-204ENST00000472024 HSPA5P11021 654 aaKnown RBP27.45■■□□□ 1.98
CHMP2B-204ENST00000472024 ZNF316A6NFI3 1004 aaPredicted RBP27.43■■□□□ 1.98
CHMP2B-204ENST00000472024 TBX22Q9Y458 520 aa27.43■■□□□ 1.98
CHMP2B-204ENST00000472024 LRPPRCP42704 1394 aaKnown RBP27.41■■□□□ 1.98
CHMP2B-204ENST00000472024 DLC1Q96QB1 1528 aa27.41■■□□□ 1.98
CHMP2B-204ENST00000472024 TECPR2O15040 1411 aa27.41■■□□□ 1.98
CHMP2B-204ENST00000472024 YTHDC2Q9H6S0 1430 aaKnown RBP27.41■■□□□ 1.98
CHMP2B-204ENST00000472024 EIF3AQ14152 1382 aaKnown RBP27.4■■□□□ 1.98
CHMP2B-204ENST00000472024 PIK3R4Q99570 1358 aa27.4■■□□□ 1.98
CHMP2B-204ENST00000472024 NPHP4O75161 1426 aaPredicted RBP27.39■■□□□ 1.97
CHMP2B-204ENST00000472024 KNDC1Q76NI1 1749 aa27.38■■□□□ 1.97
CHMP2B-204ENST00000472024 METP08581 1390 aa27.38■■□□□ 1.97
CHMP2B-204ENST00000472024 ABCC11Q96J66 1382 aa27.38■■□□□ 1.97
CHMP2B-204ENST00000472024 TMEM132EQ6IEE7 984 aa27.37■■□□□ 1.97
CHMP2B-204ENST00000472024 SBNO2Q9Y2G9 1366 aa27.36■■□□□ 1.97
CHMP2B-204ENST00000472024 ARHGEF28Q8N1W1 1705 aaKnown RBP27.36■■□□□ 1.97
CHMP2B-204ENST00000472024 ST20-MTHFSA0A0A6YYL1 179 aa27.34■■□□□ 1.97
CHMP2B-204ENST00000472024 SIRT1Q96EB6 747 aa27.34■■□□□ 1.97
CHMP2B-204ENST00000472024 CPS1P31327 1500 aa27.33■■□□□ 1.97
CHMP2B-204ENST00000472024 TESK2Q96S53 571 aa27.33■■□□□ 1.97
CHMP2B-204ENST00000472024 FAM135BQ49AJ0 1406 aa27.3■■□□□ 1.96
CHMP2B-204ENST00000472024 XRN1Q8IZH2 1706 aaKnown RBP27.3■■□□□ 1.96
CHMP2B-204ENST00000472024 NCKAP5LQ9HCH0 1330 aa27.29■■□□□ 1.96
CHMP2B-204ENST00000472024 PTPRUQ92729 1446 aa27.29■■□□□ 1.96
CHMP2B-204ENST00000472024 STRCQ7RTU9 1775 aa27.29■■□□□ 1.96
CHMP2B-204ENST00000472024 SLC24A1O60721 1099 aa27.28■■□□□ 1.96
CHMP2B-204ENST00000472024 SLC26A8Q96RN1 970 aa27.28■■□□□ 1.96
CHMP2B-204ENST00000472024 PTCH1Q13635 1447 aa27.27■■□□□ 1.96
CHMP2B-204ENST00000472024 BCANQ96GW7 911 aa27.27■■□□□ 1.96
CHMP2B-204ENST00000472024 CENPJQ9HC77 1338 aaPredicted RBP27.26■■□□□ 1.95
CHMP2B-204ENST00000472024 HSPA2P54652 639 aa27.26■■□□□ 1.95
CHMP2B-204ENST00000472024 TRAK1Q9UPV9 953 aa27.26■■□□□ 1.95
CHMP2B-204ENST00000472024 HIRIP3Q9BW71 556 aaPredicted RBP27.25■■□□□ 1.95
CHMP2B-204ENST00000472024 NWD1Q149M9 1564 aa27.24■■□□□ 1.95
CHMP2B-204ENST00000472024 CHD2O14647 1828 aaKnown RBP27.24■■□□□ 1.95
CHMP2B-204ENST00000472024 QRICH2Q9H0J4 1663 aa27.23■■□□□ 1.95
CHMP2B-204ENST00000472024 SENP3Q9H4L4 574 aaPredicted RBP27.22■■□□□ 1.95
CHMP2B-204ENST00000472024 CCDC7Q96M83 1385 aa27.21■■□□□ 1.95
CHMP2B-204ENST00000472024 C11orf95C9JLR9 678 aaPredicted RBP27.2■■□□□ 1.94
CHMP2B-204ENST00000472024 WASHC2AQ641Q2 1341 aa27.19■■□□□ 1.94
CHMP2B-204ENST00000472024 STK26Q9P289 416 aa27.19■■□□□ 1.94
CHMP2B-204ENST00000472024 ROBO2Q9HCK4 1378 aa27.19■■□□□ 1.94
CHMP2B-204ENST00000472024 AMOTL2Q9Y2J4 779 aa27.17■■□□□ 1.94
CHMP2B-204ENST00000472024 KIF7Q2M1P5 1343 aa27.16■■□□□ 1.94
CHMP2B-204ENST00000472024 TMF1P82094 1093 aa27.16■■□□□ 1.94
CHMP2B-204ENST00000472024 PRAM1Q96QH2 718 aa27.16■■□□□ 1.94
CHMP2B-204ENST00000472024 DISP3Q9P2K9 1392 aa27.16■■□□□ 1.94
CHMP2B-204ENST00000472024 KCNA6P17658 529 aa27.14■■□□□ 1.94
CHMP2B-204ENST00000472024 PUS7Q96PZ0 661 aaKnown RBP27.14■■□□□ 1.94
CHMP2B-204ENST00000472024 ADGRB2O60241 1585 aa27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms