RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 IL27Q8NEV9 243 aa7.88□□□□□ -1.15
CFHR3-205ENST00000471440 C3orf80F5H4A9 247 aa7.87□□□□□ -1.15
CFHR3-205ENST00000471440 LAPTM4AQ15012 233 aa7.87□□□□□ -1.15
CFHR3-205ENST00000471440 BARGINQ6ZT62 677 aa7.87□□□□□ -1.15
CFHR3-205ENST00000471440 PACS2Q86VP3 889 aa7.87□□□□□ -1.15
CFHR3-205ENST00000471440 NBPF3Q9H094 633 aa7.87□□□□□ -1.15
CFHR3-205ENST00000471440 SEPT9Q9UHD8 586 aaPredicted RBP7.87□□□□□ -1.15
CFHR3-205ENST00000471440 ONECUT3O60422 494 aaPredicted RBP7.86□□□□□ -1.15
CFHR3-205ENST00000471440 FAM161AQ3B820 660 aa7.86□□□□□ -1.15
CFHR3-205ENST00000471440 NBPF26B4DH59 902 aa7.86□□□□□ -1.15
CFHR3-205ENST00000471440 SMAPO00193 183 aa7.86□□□□□ -1.15
CFHR3-205ENST00000471440 Q6ZNB5 142 aa7.86□□□□□ -1.15
CFHR3-205ENST00000471440 PNMA3Q9UL41 463 aa7.85□□□□□ -1.15
CFHR3-205ENST00000471440 NUDT18Q6ZVK8 323 aa7.84□□□□□ -1.15
CFHR3-205ENST00000471440 ARID3CA6NKF2 412 aa7.84□□□□□ -1.15
CFHR3-205ENST00000471440 TATDN2Q93075 761 aa7.84□□□□□ -1.15
CFHR3-205ENST00000471440 ADGRG1Q9Y653 693 aa7.84□□□□□ -1.15
CFHR3-205ENST00000471440 MAP2K5Q13163 448 aa7.83□□□□□ -1.16
CFHR3-205ENST00000471440 ITGBL1O95965 494 aaPredicted RBP7.82□□□□□ -1.16
CFHR3-205ENST00000471440 KDM4CQ9H3R0 1056 aa7.82□□□□□ -1.16
CFHR3-205ENST00000471440 SCRIBQ14160 1630 aa7.82□□□□□ -1.16
CFHR3-205ENST00000471440 NYAP1Q6ZVC0 841 aa7.82□□□□□ -1.16
CFHR3-205ENST00000471440 FAM98CQ17RN3 349 aaKnown RBP7.81□□□□□ -1.16
CFHR3-205ENST00000471440 UNC13AQ9UPW8 1703 aa7.81□□□□□ -1.16
CFHR3-205ENST00000471440 CCDC102AQ96A19 550 aa7.8□□□□□ -1.16
CFHR3-205ENST00000471440 METTL3Q86U44 580 aaKnown RBP7.8□□□□□ -1.16
CFHR3-205ENST00000471440 LAPTM4BQ86VI4 370 aa7.8□□□□□ -1.16
CFHR3-205ENST00000471440 KRI1Q8N9T8 703 aaKnown RBP7.8□□□□□ -1.16
CFHR3-205ENST00000471440 RBM46Q8TBY0 533 aaKnown RBP7.8□□□□□ -1.16
CFHR3-205ENST00000471440 EYA1Q99502 592 aa7.8□□□□□ -1.16
CFHR3-205ENST00000471440 MINK1Q8N4C8 1332 aaPredicted RBP7.8□□□□□ -1.16
CFHR3-205ENST00000471440 IRF6O14896 467 aa7.79□□□□□ -1.16
CFHR3-205ENST00000471440 PXYLP1Q8TE99 480 aa7.79□□□□□ -1.16
CFHR3-205ENST00000471440 ZFRQ96KR1 1074 aaKnown RBP7.79□□□□□ -1.16
CFHR3-205ENST00000471440 OATP04181 439 aa7.79□□□□□ -1.16
CFHR3-205ENST00000471440 NECTIN2Q92692 538 aa7.79□□□□□ -1.16
CFHR3-205ENST00000471440 AK7Q96M32 723 aa7.79□□□□□ -1.16
CFHR3-205ENST00000471440 ANKK1Q8NFD2 765 aa7.78□□□□□ -1.16
CFHR3-205ENST00000471440 BICRAQ9NZM4 1560 aa7.78□□□□□ -1.16
CFHR3-205ENST00000471440 PHOX2BQ99453 314 aa7.77□□□□□ -1.17
CFHR3-205ENST00000471440 NLRP7Q8WX94 980 aa7.77□□□□□ -1.17
CFHR3-205ENST00000471440 SHROOM4Q9ULL8 1493 aa7.76□□□□□ -1.17
CFHR3-205ENST00000471440 RCCD1A6NED2 376 aa7.76□□□□□ -1.17
CFHR3-205ENST00000471440 DNAJB2P25686 324 aa7.75□□□□□ -1.17
CFHR3-205ENST00000471440 SAMD7Q7Z3H4 446 aa7.75□□□□□ -1.17
CFHR3-205ENST00000471440 FAM117AQ9C073 453 aa7.75□□□□□ -1.17
CFHR3-205ENST00000471440 APBB1O00213 710 aa7.75□□□□□ -1.17
CFHR3-205ENST00000471440 TRIM66O15016 1216 aa7.75□□□□□ -1.17
CFHR3-205ENST00000471440 KCNC4Q03721 635 aa7.75□□□□□ -1.17
CFHR3-205ENST00000471440 PDE4DQ08499 809 aa7.74□□□□□ -1.17
CFHR3-205ENST00000471440 TMEM134Q9H6X4 195 aa7.74□□□□□ -1.17
CFHR3-205ENST00000471440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.73□□□□□ -1.17
CFHR3-205ENST00000471440 BCAMP50895 628 aa7.73□□□□□ -1.17
CFHR3-205ENST00000471440 SWT1Q5T5J6 900 aaKnown RBP7.73□□□□□ -1.17
CFHR3-205ENST00000471440 LRCH3Q96II8 777 aa7.73□□□□□ -1.17
CFHR3-205ENST00000471440 RNF40O75150 1001 aa7.73□□□□□ -1.17
CFHR3-205ENST00000471440 TRAF7Q6Q0C0 670 aa7.73□□□□□ -1.17
CFHR3-205ENST00000471440 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.72□□□□□ -1.17
CFHR3-205ENST00000471440 PLEKHG3A1L390 1219 aa7.71□□□□□ -1.17
CFHR3-205ENST00000471440 SOWAHBA6NEL2 793 aa7.71□□□□□ -1.17
CFHR3-205ENST00000471440 HDGFP51858 240 aaKnown RBP7.71□□□□□ -1.18
CFHR3-205ENST00000471440 MDM2Q00987 491 aaPredicted RBP7.7□□□□□ -1.18
CFHR3-205ENST00000471440 GFRA3O60609 400 aa7.68□□□□□ -1.18
CFHR3-205ENST00000471440 TTLL12Q14166 644 aaPredicted RBP7.68□□□□□ -1.18
CFHR3-205ENST00000471440 AMHR2Q16671 573 aa7.68□□□□□ -1.18
CFHR3-205ENST00000471440 HPS5Q9UPZ3 1129 aa7.68□□□□□ -1.18
CFHR3-205ENST00000471440 SLF2Q8IX21 1173 aa7.68□□□□□ -1.18
CFHR3-205ENST00000471440 SLC4A3P48751 1232 aa7.67□□□□□ -1.18
CFHR3-205ENST00000471440 CLCN1P35523 988 aa7.66□□□□□ -1.18
CFHR3-205ENST00000471440 CCDC82Q8N4S0 544 aa7.66□□□□□ -1.18
CFHR3-205ENST00000471440 REPIN1Q9BWE0 567 aaKnown RBP7.66□□□□□ -1.18
CFHR3-205ENST00000471440 GPCPD1Q9NPB8 672 aa7.66□□□□□ -1.18
CFHR3-205ENST00000471440 WBP1LQ9NX94 342 aa7.66□□□□□ -1.18
CFHR3-205ENST00000471440 TSR3Q9UJK0 312 aaKnown RBP7.66□□□□□ -1.18
CFHR3-205ENST00000471440 DDX11L8A8MPP1 907 aa7.66□□□□□ -1.18
CFHR3-205ENST00000471440 PARP9Q8IXQ6 854 aa7.66□□□□□ -1.18
CFHR3-205ENST00000471440 CLUAP1Q96AJ1 413 aa7.65□□□□□ -1.18
CFHR3-205ENST00000471440 NRG2O14511 850 aaPredicted RBP7.64□□□□□ -1.19
CFHR3-205ENST00000471440 PDIA4P13667 645 aaKnown RBP7.64□□□□□ -1.19
CFHR3-205ENST00000471440 PPP4CP60510 307 aa7.64□□□□□ -1.19
CFHR3-205ENST00000471440 SLC10A3P09131 477 aa7.64□□□□□ -1.19
CFHR3-205ENST00000471440 GIGYF2Q6Y7W6 1299 aaKnown RBP7.64□□□□□ -1.19
CFHR3-205ENST00000471440 SULF1Q8IWU6 871 aa7.64□□□□□ -1.19
CFHR3-205ENST00000471440 RDH13Q8NBN7 331 aa7.64□□□□□ -1.19
CFHR3-205ENST00000471440 TMUB1Q9BVT8 246 aa7.64□□□□□ -1.19
CFHR3-205ENST00000471440 FAM217BQ9NTX9 383 aaPredicted RBP7.62□□□□□ -1.19
CFHR3-205ENST00000471440 CCDC9Q9Y3X0 531 aaKnown RBP7.62□□□□□ -1.19
CFHR3-205ENST00000471440 CFHP08603 1231 aa7.62□□□□□ -1.19
CFHR3-205ENST00000471440 ZBTB7CA1YPR0 619 aa7.6□□□□□ -1.19
CFHR3-205ENST00000471440 APLP1P51693 650 aa7.6□□□□□ -1.19
CFHR3-205ENST00000471440 CD46P15529 392 aa7.6□□□□□ -1.19
CFHR3-205ENST00000471440 RSPH4AQ5TD94 716 aa7.6□□□□□ -1.19
CFHR3-205ENST00000471440 SSTR3P32745 418 aaPredicted RBP7.59□□□□□ -1.19
CFHR3-205ENST00000471440 MS4A1P11836 297 aa7.59□□□□□ -1.2
CFHR3-205ENST00000471440 ZNF787Q6DD87 383 aa7.59□□□□□ -1.2
CFHR3-205ENST00000471440 V9GY48 417 aaPredicted RBP7.59□□□□□ -1.2
CFHR3-205ENST00000471440 TRAK2O60296 914 aa7.58□□□□□ -1.2
CFHR3-205ENST00000471440 KMT5BQ4FZB7 885 aa7.58□□□□□ -1.2
CFHR3-205ENST00000471440 EIF4G1Q04637 1599 aaKnown RBP7.57□□□□□ -1.2
CFHR3-205ENST00000471440 FLIIQ13045 1269 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms