RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 TMEM2Q9UHN6 1383 aa16.22■□□□□ 0.19
SREBF1-209ENST00000470247 ZFYVE9O95405 1425 aa16.21■□□□□ 0.19
SREBF1-209ENST00000470247 STAC3Q96MF2 364 aa16.21■□□□□ 0.19
SREBF1-209ENST00000470247 ARHGAP23Q9P227 1491 aa16.21■□□□□ 0.19
SREBF1-209ENST00000470247 ADGRF5Q8IZF2 1346 aa16.2■□□□□ 0.18
SREBF1-209ENST00000470247 NEXMIFQ5QGS0 1516 aa16.2■□□□□ 0.18
SREBF1-209ENST00000470247 ZNF142P52746 1687 aaPredicted RBP16.2■□□□□ 0.18
SREBF1-209ENST00000470247 RIMS2Q9UQ26 1411 aa16.19■□□□□ 0.18
SREBF1-209ENST00000470247 LTKP29376 864 aa16.19■□□□□ 0.18
SREBF1-209ENST00000470247 NUTM2DQ5VT03 806 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-209ENST00000470247 SLIT1O75093 1534 aa16.18■□□□□ 0.18
SREBF1-209ENST00000470247 MYOM2P54296 1465 aa16.17■□□□□ 0.18
SREBF1-209ENST00000470247 NRXN1Q9ULB1 1477 aa16.17■□□□□ 0.18
SREBF1-209ENST00000470247 IFT172Q9UG01 1749 aa16.17■□□□□ 0.18
SREBF1-209ENST00000470247 VGFO15240 615 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-209ENST00000470247 PPLO60437 1756 aa16.16■□□□□ 0.18
SREBF1-209ENST00000470247 PRAG1Q86YV5 1406 aa16.16■□□□□ 0.18
SREBF1-209ENST00000470247 LMTK3Q96Q04 1460 aa16.16■□□□□ 0.18
SREBF1-209ENST00000470247 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
SREBF1-209ENST00000470247 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.15■□□□□ 0.18
SREBF1-209ENST00000470247 HDGFP51858 240 aaKnown RBP16.13■□□□□ 0.17
SREBF1-209ENST00000470247 HSPA2P54652 639 aa16.13■□□□□ 0.17
SREBF1-209ENST00000470247 PIK3C2GO75747 1445 aa16.12■□□□□ 0.17
SREBF1-209ENST00000470247 C14orf93Q9H972 538 aaKnown RBP16.12■□□□□ 0.17
SREBF1-209ENST00000470247 NBPF1Q3BBV0 1214 aa16.11■□□□□ 0.17
SREBF1-209ENST00000470247 CFAP70Q5T0N1 1121 aa16.11■□□□□ 0.17
SREBF1-209ENST00000470247 ANKLE2Q86XL3 938 aa16.11■□□□□ 0.17
SREBF1-209ENST00000470247 EID1Q9Y6B2 187 aa16.11■□□□□ 0.17
SREBF1-209ENST00000470247 SCAF11Q99590 1463 aaKnown RBP16.1■□□□□ 0.17
SREBF1-209ENST00000470247 PLEKHG1Q9ULL1 1385 aa16.1■□□□□ 0.17
SREBF1-209ENST00000470247 SENP3Q9H4L4 574 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-209ENST00000470247 NCKAP5LQ9HCH0 1330 aa16.08■□□□□ 0.16
SREBF1-209ENST00000470247 ADAMTS13Q76LX8 1427 aa16.08■□□□□ 0.16
SREBF1-209ENST00000470247 MED14O60244 1454 aa16.07■□□□□ 0.16
SREBF1-209ENST00000470247 NRXN3Q9Y4C0 1643 aa16.06■□□□□ 0.16
SREBF1-209ENST00000470247 RALGAPBQ86X10 1494 aa16.06■□□□□ 0.16
SREBF1-209ENST00000470247 SETBP1Q9Y6X0 1596 aa16.05■□□□□ 0.16
SREBF1-209ENST00000470247 GPRASP1Q5JY77 1395 aa16.05■□□□□ 0.16
SREBF1-209ENST00000470247 TRPM1Q7Z4N2 1603 aa16.05■□□□□ 0.16
SREBF1-209ENST00000470247 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
SREBF1-209ENST00000470247 TMEM132EQ6IEE7 984 aa16.04■□□□□ 0.16
SREBF1-209ENST00000470247 SLC26A8Q96RN1 970 aa16.03■□□□□ 0.16
SREBF1-209ENST00000470247 TBX22Q9Y458 520 aa16.03■□□□□ 0.16
SREBF1-209ENST00000470247 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-209ENST00000470247 ADGRB1O14514 1584 aa16.02■□□□□ 0.16
SREBF1-209ENST00000470247 ASXL1Q8IXJ9 1541 aa16.02■□□□□ 0.15
SREBF1-209ENST00000470247 KIAA1210Q9ULL0 1709 aa16.02■□□□□ 0.15
SREBF1-209ENST00000470247 ROCK2O75116 1388 aaKnown RBP16.01■□□□□ 0.15
SREBF1-209ENST00000470247 METP08581 1390 aa16.01■□□□□ 0.15
SREBF1-209ENST00000470247 SETD1AO15047 1707 aaKnown RBP16■□□□□ 0.15
SREBF1-209ENST00000470247 IQGAP1P46940 1657 aa16■□□□□ 0.15
SREBF1-209ENST00000470247 BCANQ96GW7 911 aa16■□□□□ 0.15
SREBF1-209ENST00000470247 STRCQ7RTU9 1775 aa16■□□□□ 0.15
SREBF1-209ENST00000470247 CARD11Q9BXL7 1154 aa15.99■□□□□ 0.15
SREBF1-209ENST00000470247 POLR1AO95602 1720 aaPredicted RBP15.97■□□□□ 0.15
SREBF1-209ENST00000470247 PTPRUQ92729 1446 aa15.97■□□□□ 0.15
SREBF1-209ENST00000470247 LAMC1P11047 1609 aa15.97■□□□□ 0.15
SREBF1-209ENST00000470247 LRPPRCP42704 1394 aaKnown RBP15.96■□□□□ 0.15
SREBF1-209ENST00000470247 YTHDC2Q9H6S0 1430 aaKnown RBP15.95■□□□□ 0.14
SREBF1-209ENST00000470247 ABCC11Q96J66 1382 aa15.95■□□□□ 0.14
SREBF1-209ENST00000470247 DIP2AQ14689 1571 aa15.95■□□□□ 0.14
SREBF1-209ENST00000470247 HSPA5P11021 654 aaKnown RBP15.94■□□□□ 0.14
SREBF1-209ENST00000470247 PIK3R4Q99570 1358 aa15.94■□□□□ 0.14
SREBF1-209ENST00000470247 USP47Q96K76 1375 aa15.93■□□□□ 0.14
SREBF1-209ENST00000470247 STK26Q9P289 416 aa15.93■□□□□ 0.14
SREBF1-209ENST00000470247 TRAK1Q9UPV9 953 aa15.93■□□□□ 0.14
SREBF1-209ENST00000470247 EIF4G2P78344 907 aaKnown RBP eCLIP15.92■□□□□ 0.14
SREBF1-209ENST00000470247 AMOTL2Q9Y2J4 779 aa15.92■□□□□ 0.14
SREBF1-209ENST00000470247 SIRT1Q96EB6 747 aa15.91■□□□□ 0.14
SREBF1-209ENST00000470247 HIRIP3Q9BW71 556 aaPredicted RBP15.91■□□□□ 0.14
SREBF1-209ENST00000470247 TECPR2O15040 1411 aa15.91■□□□□ 0.14
SREBF1-209ENST00000470247 ST20-MTHFSA0A0A6YYL1 179 aa15.9■□□□□ 0.14
SREBF1-209ENST00000470247 KCNA6P17658 529 aa15.9■□□□□ 0.14
SREBF1-209ENST00000470247 ROBO2Q9HCK4 1378 aa15.89■□□□□ 0.13
SREBF1-209ENST00000470247 TESK2Q96S53 571 aa15.89■□□□□ 0.13
SREBF1-209ENST00000470247 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
SREBF1-209ENST00000470247 WAPLQ7Z5K2 1190 aa15.88■□□□□ 0.13
SREBF1-209ENST00000470247 DLC1Q96QB1 1528 aa15.88■□□□□ 0.13
SREBF1-209ENST00000470247 PLEKHH1Q9ULM0 1364 aa15.87■□□□□ 0.13
SREBF1-209ENST00000470247 CHD2O14647 1828 aaKnown RBP15.87■□□□□ 0.13
SREBF1-209ENST00000470247 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
SREBF1-209ENST00000470247 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
SREBF1-209ENST00000470247 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
SREBF1-209ENST00000470247 CENPJQ9HC77 1338 aaPredicted RBP15.85■□□□□ 0.13
SREBF1-209ENST00000470247 PTCH1Q13635 1447 aa15.85■□□□□ 0.13
SREBF1-209ENST00000470247 CPS1P31327 1500 aa15.84■□□□□ 0.13
SREBF1-209ENST00000470247 NWD1Q149M9 1564 aa15.84■□□□□ 0.13
SREBF1-209ENST00000470247 C11orf95C9JLR9 678 aaPredicted RBP15.84■□□□□ 0.13
SREBF1-209ENST00000470247 KNDC1Q76NI1 1749 aa15.84■□□□□ 0.13
SREBF1-209ENST00000470247 ARHGEF28Q8N1W1 1705 aaKnown RBP15.84■□□□□ 0.13
SREBF1-209ENST00000470247 EIF3AQ14152 1382 aaKnown RBP15.84■□□□□ 0.13
SREBF1-209ENST00000470247 ZNF335Q9H4Z2 1342 aaPredicted RBP15.83■□□□□ 0.12
SREBF1-209ENST00000470247 SAFB2Q14151 953 aaKnown RBP eCLIP15.82■□□□□ 0.12
SREBF1-209ENST00000470247 POGKQ9P215 609 aa15.82■□□□□ 0.12
SREBF1-209ENST00000470247 SBNO2Q9Y2G9 1366 aa15.82■□□□□ 0.12
SREBF1-209ENST00000470247 STRCP1A6NGW2 1772 aa15.82■□□□□ 0.12
SREBF1-209ENST00000470247 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
SREBF1-209ENST00000470247 RBM33Q96EV2 1170 aaKnown RBP15.79■□□□□ 0.12
SREBF1-209ENST00000470247 NKTRP30414 1462 aaKnown RBP15.78■□□□□ 0.12
SREBF1-209ENST00000470247 MINK1Q8N4C8 1332 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms