RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 MYOM3Q5VTT5 1437 aa14.05□□□□□ -0.16
SYNGAP1-205ENST00000470232 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
SYNGAP1-205ENST00000470232 RRP7BPQ9NSQ0 103 aa14.03□□□□□ -0.16
SYNGAP1-205ENST00000470232 KIF15Q9NS87 1388 aa14.03□□□□□ -0.16
SYNGAP1-205ENST00000470232 ERBINQ96RT1 1412 aa14.03□□□□□ -0.16
SYNGAP1-205ENST00000470232 NCOA3Q9Y6Q9 1424 aa14.03□□□□□ -0.16
SYNGAP1-205ENST00000470232 ATF3P18847 181 aa14.02□□□□□ -0.17
SYNGAP1-205ENST00000470232 CADPS2Q86UW7 1296 aa14.02□□□□□ -0.17
SYNGAP1-205ENST00000470232 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
SYNGAP1-205ENST00000470232 NWD1Q149M9 1564 aa14□□□□□ -0.17
SYNGAP1-205ENST00000470232 CDK12Q9NYV4 1490 aaPredicted RBP13.99□□□□□ -0.17
SYNGAP1-205ENST00000470232 C19orf44Q9H6X5 657 aa13.99□□□□□ -0.17
SYNGAP1-205ENST00000470232 TBX22Q9Y458 520 aa13.99□□□□□ -0.17
SYNGAP1-205ENST00000470232 COL16A1Q07092 1604 aaPredicted RBP13.99□□□□□ -0.17
SYNGAP1-205ENST00000470232 NUTM2BA6NNL0 878 aaPredicted RBP13.98□□□□□ -0.17
SYNGAP1-205ENST00000470232 NUTM2EB1AL46 878 aaPredicted RBP13.98□□□□□ -0.17
SYNGAP1-205ENST00000470232 NUTM2AQ8IVF1 878 aaPredicted RBP13.98□□□□□ -0.17
SYNGAP1-205ENST00000470232 LRP6O75581 1613 aa13.97□□□□□ -0.17
SYNGAP1-205ENST00000470232 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
SYNGAP1-205ENST00000470232 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
SYNGAP1-205ENST00000470232 CHD2O14647 1828 aaKnown RBP13.97□□□□□ -0.17
SYNGAP1-205ENST00000470232 LMTK2Q8IWU2 1503 aa13.96□□□□□ -0.17
SYNGAP1-205ENST00000470232 ADGRB3O60242 1522 aa13.95□□□□□ -0.18
SYNGAP1-205ENST00000470232 AFF2P51816 1311 aa13.95□□□□□ -0.18
SYNGAP1-205ENST00000470232 SHPRHQ149N8 1683 aa13.95□□□□□ -0.18
SYNGAP1-205ENST00000470232 NOS1P29475 1434 aa13.95□□□□□ -0.18
SYNGAP1-205ENST00000470232 SRCAPQ6ZRS2 3230 aa13.95□□□□□ -0.18
SYNGAP1-205ENST00000470232 AHDC1Q5TGY3 1603 aaPredicted RBP13.94□□□□□ -0.18
SYNGAP1-205ENST00000470232 RBM6P78332 1123 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-205ENST00000470232 QTRT2Q9H974 415 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-205ENST00000470232 ANKRD30AQ9BXX3 1397 aa13.94□□□□□ -0.18
SYNGAP1-205ENST00000470232 NUTM2DQ5VT03 806 aaPredicted RBP13.93□□□□□ -0.18
SYNGAP1-205ENST00000470232 LRRC59Q96AG4 307 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-205ENST00000470232 ABCC5O15440 1437 aa13.92□□□□□ -0.18
SYNGAP1-205ENST00000470232 RIMS2Q9UQ26 1411 aa13.92□□□□□ -0.18
SYNGAP1-205ENST00000470232 NGLY1Q96IV0 654 aa13.92□□□□□ -0.18
SYNGAP1-205ENST00000470232 PIK3R4Q99570 1358 aa13.92□□□□□ -0.18
SYNGAP1-205ENST00000470232 KANK4Q5T7N3 995 aaPredicted RBP13.91□□□□□ -0.18
SYNGAP1-205ENST00000470232 BRINP3Q76B58 766 aa13.91□□□□□ -0.18
SYNGAP1-205ENST00000470232 CHGAP10645 457 aaKnown RBP13.9□□□□□ -0.18
SYNGAP1-205ENST00000470232 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
SYNGAP1-205ENST00000470232 CHIC2Q9UKJ5 165 aa13.9□□□□□ -0.18
SYNGAP1-205ENST00000470232 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-205ENST00000470232 ZFYVE9O95405 1425 aa13.9□□□□□ -0.19
SYNGAP1-205ENST00000470232 RPRD2Q5VT52 1461 aaKnown RBP13.89□□□□□ -0.19
SYNGAP1-205ENST00000470232 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
SYNGAP1-205ENST00000470232 DAPK1P53355 1430 aa13.89□□□□□ -0.19
SYNGAP1-205ENST00000470232 VPS8Q8N3P4 1428 aa13.89□□□□□ -0.19
SYNGAP1-205ENST00000470232 APLP2Q06481 763 aa13.88□□□□□ -0.19
SYNGAP1-205ENST00000470232 AMOTL2Q9Y2J4 779 aa13.88□□□□□ -0.19
SYNGAP1-205ENST00000470232 CROCC2H7BZ55 1655 aa13.88□□□□□ -0.19
SYNGAP1-205ENST00000470232 ATAD2Q6PL18 1390 aa13.87□□□□□ -0.19
SYNGAP1-205ENST00000470232 SETD5Q9C0A6 1442 aa13.87□□□□□ -0.19
SYNGAP1-205ENST00000470232 PTPN23Q9H3S7 1636 aa13.86□□□□□ -0.19
SYNGAP1-205ENST00000470232 DIP2AQ14689 1571 aa13.85□□□□□ -0.19
SYNGAP1-205ENST00000470232 RGS12O14924 1447 aa13.85□□□□□ -0.19
SYNGAP1-205ENST00000470232 DCCP43146 1447 aa13.84□□□□□ -0.19
SYNGAP1-205ENST00000470232 CCDC125Q86Z20 511 aa13.84□□□□□ -0.19
SYNGAP1-205ENST00000470232 MYO5BQ9ULV0 1848 aa13.83□□□□□ -0.2
SYNGAP1-205ENST00000470232 TMEM131LA2VDJ0 1609 aa13.82□□□□□ -0.2
SYNGAP1-205ENST00000470232 ADAMTS13Q76LX8 1427 aa13.82□□□□□ -0.2
SYNGAP1-205ENST00000470232 GCC2Q8IWJ2 1684 aa13.82□□□□□ -0.2
SYNGAP1-205ENST00000470232 TRPM2O94759 1503 aa13.82□□□□□ -0.2
SYNGAP1-205ENST00000470232 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
SYNGAP1-205ENST00000470232 ASXL1Q8IXJ9 1541 aa13.81□□□□□ -0.2
SYNGAP1-205ENST00000470232 ADAMTS2O95450 1211 aa13.8□□□□□ -0.2
SYNGAP1-205ENST00000470232 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-205ENST00000470232 USP21Q9UK80 565 aa13.8□□□□□ -0.2
SYNGAP1-205ENST00000470232 PNPLA6Q8IY17 1366 aa13.79□□□□□ -0.2
SYNGAP1-205ENST00000470232 ANKRD50Q9ULJ7 1429 aa13.79□□□□□ -0.2
SYNGAP1-205ENST00000470232 MST1RQ04912 1400 aa13.78□□□□□ -0.2
SYNGAP1-205ENST00000470232 NHSL1Q5SYE7 1610 aa13.77□□□□□ -0.21
SYNGAP1-205ENST00000470232 ADGRL2O95490 1459 aa13.76□□□□□ -0.21
SYNGAP1-205ENST00000470232 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
SYNGAP1-205ENST00000470232 FNBP4Q8N3X1 1017 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-205ENST00000470232 DDX17Q92841 729 aaKnown RBP13.75□□□□□ -0.21
SYNGAP1-205ENST00000470232 PPP4R3CPQ6ZMV5 832 aa13.74□□□□□ -0.21
SYNGAP1-205ENST00000470232 FAM50AQ14320 339 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-205ENST00000470232 ZNF326Q5BKZ1 582 aaKnown RBP13.73□□□□□ -0.21
SYNGAP1-205ENST00000470232 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
SYNGAP1-205ENST00000470232 UNC13BO14795 1591 aa13.71□□□□□ -0.21
SYNGAP1-205ENST00000470232 ADGRL3Q9HAR2 1447 aa13.71□□□□□ -0.22
SYNGAP1-205ENST00000470232 EP400Q96L91 3159 aa13.71□□□□□ -0.22
SYNGAP1-205ENST00000470232 SOS2Q07890 1332 aaPredicted RBP13.7□□□□□ -0.22
SYNGAP1-205ENST00000470232 SF3B2Q13435 895 aaKnown RBP13.7□□□□□ -0.22
SYNGAP1-205ENST00000470232 ATRNO75882 1429 aa13.7□□□□□ -0.22
SYNGAP1-205ENST00000470232 C1orf167Q5SNV9 1468 aa13.69□□□□□ -0.22
SYNGAP1-205ENST00000470232 LOC105371045A0A1W2PR82 267 aa13.69□□□□□ -0.22
SYNGAP1-205ENST00000470232 SETBP1Q9Y6X0 1596 aa13.69□□□□□ -0.22
SYNGAP1-205ENST00000470232 XRN1Q8IZH2 1706 aaKnown RBP13.69□□□□□ -0.22
SYNGAP1-205ENST00000470232 GJD4Q96KN9 370 aaPredicted RBP13.68□□□□□ -0.22
SYNGAP1-205ENST00000470232 E9PCH4 1651 aa13.68□□□□□ -0.22
SYNGAP1-205ENST00000470232 METP08581 1390 aa13.68□□□□□ -0.22
SYNGAP1-205ENST00000470232 ORAI2Q96SN7 254 aa13.66□□□□□ -0.22
SYNGAP1-205ENST00000470232 NUP155O75694 1391 aa13.65□□□□□ -0.22
SYNGAP1-205ENST00000470232 BLMP54132 1417 aaPredicted RBP13.64□□□□□ -0.23
SYNGAP1-205ENST00000470232 LAMC1P11047 1609 aa13.64□□□□□ -0.23
SYNGAP1-205ENST00000470232 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
SYNGAP1-205ENST00000470232 NRXN3Q9Y4C0 1643 aa13.63□□□□□ -0.23
SYNGAP1-205ENST00000470232 IQGAP3Q86VI3 1631 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms