RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 IFT172Q9UG01 1749 aa25.02■■□□□ 1.6
PCCB-209ENST00000469217 PPLO60437 1756 aa25.02■■□□□ 1.6
PCCB-209ENST00000469217 NUTM2DQ5VT03 806 aaPredicted RBP25.01■■□□□ 1.59
PCCB-209ENST00000469217 PPP1R15AO75807 674 aaPredicted RBP25■■□□□ 1.59
PCCB-209ENST00000469217 RIMS2Q9UQ26 1411 aa25■■□□□ 1.59
PCCB-209ENST00000469217 ZFYVE9O95405 1425 aa25■■□□□ 1.59
PCCB-209ENST00000469217 SLIT1O75093 1534 aa24.98■■□□□ 1.59
PCCB-209ENST00000469217 ARHGAP23Q9P227 1491 aa24.98■■□□□ 1.59
PCCB-209ENST00000469217 STAC3Q96MF2 364 aa24.98■■□□□ 1.59
PCCB-209ENST00000469217 LMTK3Q96Q04 1460 aa24.97■■□□□ 1.59
PCCB-209ENST00000469217 MYOM2P54296 1465 aa24.97■■□□□ 1.59
PCCB-209ENST00000469217 VGFO15240 615 aaPredicted RBP24.96■■□□□ 1.59
PCCB-209ENST00000469217 ADGRF5Q8IZF2 1346 aa24.96■■□□□ 1.59
PCCB-209ENST00000469217 LTKP29376 864 aa24.94■■□□□ 1.58
PCCB-209ENST00000469217 HDGFP51858 240 aaKnown RBP24.94■■□□□ 1.58
PCCB-209ENST00000469217 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.94■■□□□ 1.58
PCCB-209ENST00000469217 NBPF8Q3BBV2 869 aa24.93■■□□□ 1.58
PCCB-209ENST00000469217 TXNDC2Q86VQ3 553 aa24.93■■□□□ 1.58
PCCB-209ENST00000469217 PRAG1Q86YV5 1406 aa24.92■■□□□ 1.58
PCCB-209ENST00000469217 EID1Q9Y6B2 187 aa24.92■■□□□ 1.58
PCCB-209ENST00000469217 NRXN1Q9ULB1 1477 aa24.92■■□□□ 1.58
PCCB-209ENST00000469217 HSPA2P54652 639 aa24.91■■□□□ 1.58
PCCB-209ENST00000469217 SENP3Q9H4L4 574 aaPredicted RBP24.9■■□□□ 1.58
PCCB-209ENST00000469217 SCAF11Q99590 1463 aaKnown RBP24.89■■□□□ 1.57
PCCB-209ENST00000469217 ANKLE2Q86XL3 938 aa24.89■■□□□ 1.57
PCCB-209ENST00000469217 PIK3C2GO75747 1445 aa24.88■■□□□ 1.57
PCCB-209ENST00000469217 PLEKHG1Q9ULL1 1385 aa24.84■■□□□ 1.57
PCCB-209ENST00000469217 CFAP70Q5T0N1 1121 aa24.83■■□□□ 1.57
PCCB-209ENST00000469217 NCKAP5LQ9HCH0 1330 aa24.82■■□□□ 1.56
PCCB-209ENST00000469217 TRPM1Q7Z4N2 1603 aa24.82■■□□□ 1.56
PCCB-209ENST00000469217 BCANQ96GW7 911 aa24.81■■□□□ 1.56
PCCB-209ENST00000469217 C14orf93Q9H972 538 aaKnown RBP24.81■■□□□ 1.56
PCCB-209ENST00000469217 POLR1AO95602 1720 aaPredicted RBP24.81■■□□□ 1.56
PCCB-209ENST00000469217 SETBP1Q9Y6X0 1596 aa24.81■■□□□ 1.56
PCCB-209ENST00000469217 NRXN3Q9Y4C0 1643 aa24.8■■□□□ 1.56
PCCB-209ENST00000469217 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
PCCB-209ENST00000469217 NBPF1Q3BBV0 1214 aa24.79■■□□□ 1.56
PCCB-209ENST00000469217 IQGAP1P46940 1657 aa24.79■■□□□ 1.56
PCCB-209ENST00000469217 RALGAPBQ86X10 1494 aa24.78■■□□□ 1.56
PCCB-209ENST00000469217 MED14O60244 1454 aa24.78■■□□□ 1.56
PCCB-209ENST00000469217 ALKQ9UM73 1620 aa24.78■■□□□ 1.56
PCCB-209ENST00000469217 KIAA1210Q9ULL0 1709 aa24.78■■□□□ 1.56
PCCB-209ENST00000469217 ADAMTS13Q76LX8 1427 aa24.77■■□□□ 1.56
PCCB-209ENST00000469217 NPHP4O75161 1426 aaPredicted RBP24.76■■□□□ 1.55
PCCB-209ENST00000469217 LAMC1P11047 1609 aa24.75■■□□□ 1.55
PCCB-209ENST00000469217 ROCK2O75116 1388 aaKnown RBP24.75■■□□□ 1.55
PCCB-209ENST00000469217 SLC26A8Q96RN1 970 aa24.75■■□□□ 1.55
PCCB-209ENST00000469217 STRCQ7RTU9 1775 aa24.74■■□□□ 1.55
PCCB-209ENST00000469217 SETD1AO15047 1707 aaKnown RBP24.73■■□□□ 1.55
PCCB-209ENST00000469217 TMEM132EQ6IEE7 984 aa24.72■■□□□ 1.55
PCCB-209ENST00000469217 ADGRB1O14514 1584 aa24.71■■□□□ 1.55
PCCB-209ENST00000469217 GPRASP1Q5JY77 1395 aa24.71■■□□□ 1.55
PCCB-209ENST00000469217 CARD11Q9BXL7 1154 aa24.7■■□□□ 1.55
PCCB-209ENST00000469217 TBX22Q9Y458 520 aa24.7■■□□□ 1.55
PCCB-209ENST00000469217 ASXL1Q8IXJ9 1541 aa24.7■■□□□ 1.54
PCCB-209ENST00000469217 METP08581 1390 aa24.69■■□□□ 1.54
PCCB-209ENST00000469217 DIP2AQ14689 1571 aa24.69■■□□□ 1.54
PCCB-209ENST00000469217 YTHDC2Q9H6S0 1430 aaKnown RBP24.62■■□□□ 1.53
PCCB-209ENST00000469217 STK26Q9P289 416 aa24.61■■□□□ 1.53
PCCB-209ENST00000469217 TRAK1Q9UPV9 953 aa24.61■■□□□ 1.53
PCCB-209ENST00000469217 PTPRUQ92729 1446 aa24.6■■□□□ 1.53
PCCB-209ENST00000469217 PIK3R4Q99570 1358 aa24.6■■□□□ 1.53
PCCB-209ENST00000469217 LRPPRCP42704 1394 aaKnown RBP24.59■■□□□ 1.53
PCCB-209ENST00000469217 USP47Q96K76 1375 aa24.59■■□□□ 1.53
PCCB-209ENST00000469217 DMRT2Q9Y5R5 561 aa24.58■■□□□ 1.53
PCCB-209ENST00000469217 EIF4G2P78344 907 aaKnown RBP eCLIP24.57■■□□□ 1.52
PCCB-209ENST00000469217 ABCC11Q96J66 1382 aa24.57■■□□□ 1.52
PCCB-209ENST00000469217 AMOTL2Q9Y2J4 779 aa24.56■■□□□ 1.52
PCCB-209ENST00000469217 CHD2O14647 1828 aaKnown RBP24.55■■□□□ 1.52
PCCB-209ENST00000469217 HSPA5P11021 654 aaKnown RBP24.54■■□□□ 1.52
PCCB-209ENST00000469217 HIRIP3Q9BW71 556 aaPredicted RBP24.53■■□□□ 1.52
PCCB-209ENST00000469217 TECPR2O15040 1411 aa24.53■■□□□ 1.52
PCCB-209ENST00000469217 XRN1Q8IZH2 1706 aaKnown RBP24.52■■□□□ 1.52
PCCB-209ENST00000469217 ARHGEF28Q8N1W1 1705 aaKnown RBP24.52■■□□□ 1.52
PCCB-209ENST00000469217 ST20-MTHFSA0A0A6YYL1 179 aa24.52■■□□□ 1.52
PCCB-209ENST00000469217 KCNA6P17658 529 aa24.52■■□□□ 1.52
PCCB-209ENST00000469217 KNDC1Q76NI1 1749 aa24.52■■□□□ 1.52
PCCB-209ENST00000469217 EIF3AQ14152 1382 aaKnown RBP24.51■■□□□ 1.51
PCCB-209ENST00000469217 DLC1Q96QB1 1528 aa24.51■■□□□ 1.51
PCCB-209ENST00000469217 ROBO2Q9HCK4 1378 aa24.5■■□□□ 1.51
PCCB-209ENST00000469217 CPS1P31327 1500 aa24.5■■□□□ 1.51
PCCB-209ENST00000469217 PRAM1Q96QH2 718 aa24.49■■□□□ 1.51
PCCB-209ENST00000469217 NWD1Q149M9 1564 aa24.48■■□□□ 1.51
PCCB-209ENST00000469217 WAPLQ7Z5K2 1190 aa24.48■■□□□ 1.51
PCCB-209ENST00000469217 SIRT1Q96EB6 747 aa24.47■■□□□ 1.51
PCCB-209ENST00000469217 CENPJQ9HC77 1338 aaPredicted RBP24.47■■□□□ 1.51
PCCB-209ENST00000469217 PTCH1Q13635 1447 aa24.47■■□□□ 1.51
PCCB-209ENST00000469217 FAM135BQ49AJ0 1406 aa24.47■■□□□ 1.51
PCCB-209ENST00000469217 PLEKHH1Q9ULM0 1364 aa24.46■■□□□ 1.51
PCCB-209ENST00000469217 STRCP1A6NGW2 1772 aa24.46■■□□□ 1.51
PCCB-209ENST00000469217 SAFB2Q14151 953 aaKnown RBP eCLIP24.46■■□□□ 1.51
PCCB-209ENST00000469217 POGKQ9P215 609 aa24.46■■□□□ 1.51
PCCB-209ENST00000469217 ZNF335Q9H4Z2 1342 aaPredicted RBP24.46■■□□□ 1.51
PCCB-209ENST00000469217 TESK2Q96S53 571 aa24.43■■□□□ 1.5
PCCB-209ENST00000469217 QRICH2Q9H0J4 1663 aa24.42■■□□□ 1.5
PCCB-209ENST00000469217 NKTRP30414 1462 aaKnown RBP24.41■■□□□ 1.5
PCCB-209ENST00000469217 RBM33Q96EV2 1170 aaKnown RBP24.4■■□□□ 1.5
PCCB-209ENST00000469217 SBNO2Q9Y2G9 1366 aa24.38■■□□□ 1.49
PCCB-209ENST00000469217 MINK1Q8N4C8 1332 aaPredicted RBP24.38■■□□□ 1.49
PCCB-209ENST00000469217 PROSER2Q86WR7 435 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms