RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 IRF6O14896 467 aa9.12□□□□□ -0.95
SMC4-208ENST00000467468 SWT1Q5T5J6 900 aaKnown RBP9.12□□□□□ -0.95
SMC4-208ENST00000467468 BARGINQ6ZT62 677 aa9.12□□□□□ -0.95
SMC4-208ENST00000467468 TMEM134Q9H6X4 195 aa9.12□□□□□ -0.95
SMC4-208ENST00000467468 TSR3Q9UJK0 312 aaKnown RBP9.12□□□□□ -0.95
SMC4-208ENST00000467468 HPS5Q9UPZ3 1129 aa9.12□□□□□ -0.95
SMC4-208ENST00000467468 PPP4CP60510 307 aa9.1□□□□□ -0.95
SMC4-208ENST00000467468 CCDC102AQ96A19 550 aa9.1□□□□□ -0.95
SMC4-208ENST00000467468 PRKCSHP14314 528 aaPredicted RBP9.09□□□□□ -0.95
SMC4-208ENST00000467468 RSPH4AQ5TD94 716 aa9.08□□□□□ -0.96
SMC4-208ENST00000467468 PRR14Q9BWN1 585 aa9.06□□□□□ -0.96
SMC4-208ENST00000467468 WBP1LQ9NX94 342 aa9.06□□□□□ -0.96
SMC4-208ENST00000467468 SULF1Q8IWU6 871 aa9.05□□□□□ -0.96
SMC4-208ENST00000467468 DAXXQ9UER7 740 aaPredicted RBP9.05□□□□□ -0.96
SMC4-208ENST00000467468 CLCN1P35523 988 aa9.03□□□□□ -0.96
SMC4-208ENST00000467468 AK7Q96M32 723 aa9.03□□□□□ -0.96
SMC4-208ENST00000467468 KMT5BQ4FZB7 885 aa9.02□□□□□ -0.97
SMC4-208ENST00000467468 NLRP7Q8WX94 980 aa9.01□□□□□ -0.97
SMC4-208ENST00000467468 PHOX2BQ99453 314 aa9.01□□□□□ -0.97
SMC4-208ENST00000467468 DDX11L8A8MPP1 907 aa9□□□□□ -0.97
SMC4-208ENST00000467468 MDM2Q00987 491 aaPredicted RBP9□□□□□ -0.97
SMC4-208ENST00000467468 RDH13Q8NBN7 331 aa9□□□□□ -0.97
SMC4-208ENST00000467468 GPCPD1Q9NPB8 672 aa9□□□□□ -0.97
SMC4-208ENST00000467468 CFHP08603 1231 aa8.99□□□□□ -0.97
SMC4-208ENST00000467468 TPRNQ4KMQ1 711 aa8.99□□□□□ -0.97
SMC4-208ENST00000467468 TTLL12Q14166 644 aaPredicted RBP8.98□□□□□ -0.97
SMC4-208ENST00000467468 AMHR2Q16671 573 aa8.98□□□□□ -0.97
SMC4-208ENST00000467468 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
SMC4-208ENST00000467468 TRIM66O15016 1216 aa8.96□□□□□ -0.98
SMC4-208ENST00000467468 APLP1P51693 650 aa8.96□□□□□ -0.98
SMC4-208ENST00000467468 PLA2G2EQ9NZK7 142 aa8.96□□□□□ -0.98
SMC4-208ENST00000467468 SLC10A3P09131 477 aa8.95□□□□□ -0.98
SMC4-208ENST00000467468 ACTN4O43707 911 aaKnown RBP8.94□□□□□ -0.98
SMC4-208ENST00000467468 ITGBL1O95965 494 aaPredicted RBP8.94□□□□□ -0.98
SMC4-208ENST00000467468 PCDHB3Q9Y5E6 796 aa8.94□□□□□ -0.98
SMC4-208ENST00000467468 KCNC4Q03721 635 aa8.93□□□□□ -0.98
SMC4-208ENST00000467468 FAM217BQ9NTX9 383 aaPredicted RBP8.93□□□□□ -0.98
SMC4-208ENST00000467468 CD46P15529 392 aa8.92□□□□□ -0.98
SMC4-208ENST00000467468 TMUB1Q9BVT8 246 aa8.92□□□□□ -0.98
SMC4-208ENST00000467468 IL21Q9HBE4 155 aa8.92□□□□□ -0.98
SMC4-208ENST00000467468 GCGRP47871 477 aa8.91□□□□□ -0.98
SMC4-208ENST00000467468 PDE4DQ08499 809 aa8.91□□□□□ -0.98
SMC4-208ENST00000467468 GRIPAP1Q4V328 841 aa8.91□□□□□ -0.98
SMC4-208ENST00000467468 IFFO2Q5TF58 517 aa8.91□□□□□ -0.98
SMC4-208ENST00000467468 GIGYF2Q6Y7W6 1299 aaKnown RBP8.91□□□□□ -0.98
SMC4-208ENST00000467468 MTRQ99707 1265 aa8.91□□□□□ -0.98
SMC4-208ENST00000467468 PARP9Q8IXQ6 854 aa8.9□□□□□ -0.98
SMC4-208ENST00000467468 NR1I2O75469 434 aa8.89□□□□□ -0.99
SMC4-208ENST00000467468 SSTR3P32745 418 aaPredicted RBP8.89□□□□□ -0.99
SMC4-208ENST00000467468 TJAP1Q5JTD0 557 aa8.89□□□□□ -0.99
SMC4-208ENST00000467468 COPS2P61201 443 aa8.88□□□□□ -0.99
SMC4-208ENST00000467468 USP46P62068 366 aa8.88□□□□□ -0.99
SMC4-208ENST00000467468 ATP6V1AP38606 617 aa8.87□□□□□ -0.99
SMC4-208ENST00000467468 FUT2Q10981 343 aa8.87□□□□□ -0.99
SMC4-208ENST00000467468 BLOC1S3Q6QNY0 202 aa8.87□□□□□ -0.99
SMC4-208ENST00000467468 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
SMC4-208ENST00000467468 KDM4AO75164 1064 aa8.86□□□□□ -0.99
SMC4-208ENST00000467468 NUTM1Q86Y26 1132 aa8.86□□□□□ -0.99
SMC4-208ENST00000467468 ZPR1O75312 459 aa8.84□□□□□ -0.99
SMC4-208ENST00000467468 DIXDC1Q155Q3 683 aa8.84□□□□□ -0.99
SMC4-208ENST00000467468 BEGAINQ9BUH8 593 aa8.83□□□□□ -1
SMC4-208ENST00000467468 PUS10Q3MIT2 529 aaKnown RBP8.82□□□□□ -1
SMC4-208ENST00000467468 MORN1Q5T089 497 aa8.82□□□□□ -1
SMC4-208ENST00000467468 A0A0G2JS52 829 aa8.81□□□□□ -1
SMC4-208ENST00000467468 GGCXP38435 758 aa8.81□□□□□ -1
SMC4-208ENST00000467468 Q3C1V9 767 aa8.81□□□□□ -1
SMC4-208ENST00000467468 ZNF516Q92618 1163 aa8.81□□□□□ -1
SMC4-208ENST00000467468 MS4A1P11836 297 aa8.8□□□□□ -1
SMC4-208ENST00000467468 SCUBE3Q8IX30 993 aa8.8□□□□□ -1
SMC4-208ENST00000467468 HOXA2O43364 376 aa8.79□□□□□ -1
SMC4-208ENST00000467468 FMNL1O95466 1100 aaPredicted RBP8.79□□□□□ -1
SMC4-208ENST00000467468 ADH1BP00325 375 aa8.79□□□□□ -1
SMC4-208ENST00000467468 SPIRE2Q8WWL2 714 aa8.78□□□□□ -1
SMC4-208ENST00000467468 KDM4CQ9H3R0 1056 aa8.78□□□□□ -1
SMC4-208ENST00000467468 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
SMC4-208ENST00000467468 SALL2Q9Y467 1007 aaPredicted RBP8.78□□□□□ -1
SMC4-208ENST00000467468 TLL1O43897 1013 aa8.77□□□□□ -1.01
SMC4-208ENST00000467468 DDRGK1Q96HY6 314 aa8.77□□□□□ -1.01
SMC4-208ENST00000467468 SPSB2Q99619 263 aa8.77□□□□□ -1.01
SMC4-208ENST00000467468 NEUROD2Q15784 382 aa8.76□□□□□ -1.01
SMC4-208ENST00000467468 NKX2-3Q8TAU0 364 aa8.76□□□□□ -1.01
SMC4-208ENST00000467468 GPBP1L1Q9HC44 474 aaPredicted RBP8.76□□□□□ -1.01
SMC4-208ENST00000467468 FDX1P10109 184 aa8.75□□□□□ -1.01
SMC4-208ENST00000467468 TBC1D2Q9BYX2 928 aa8.75□□□□□ -1.01
SMC4-208ENST00000467468 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
SMC4-208ENST00000467468 GJA5P36382 358 aa8.74□□□□□ -1.01
SMC4-208ENST00000467468 SLC6A16Q9GZN6 736 aa8.74□□□□□ -1.01
SMC4-208ENST00000467468 RGS20O76081 388 aa8.73□□□□□ -1.01
SMC4-208ENST00000467468 BRICD5Q6PL45 260 aa8.73□□□□□ -1.01
SMC4-208ENST00000467468 THAP11Q96EK4 314 aa8.73□□□□□ -1.01
SMC4-208ENST00000467468 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.73□□□□□ -1.01
SMC4-208ENST00000467468 MOXD2PA6NHM9 499 aa8.72□□□□□ -1.01
SMC4-208ENST00000467468 PPP1R18Q6NYC8 613 aa8.72□□□□□ -1.01
SMC4-208ENST00000467468 GUCA2AQ02747 115 aa8.71□□□□□ -1.02
SMC4-208ENST00000467468 MSS51Q4VC12 460 aa8.71□□□□□ -1.02
SMC4-208ENST00000467468 RNF19BQ6ZMZ0 732 aa8.71□□□□□ -1.02
SMC4-208ENST00000467468 HLA-CQ95604 372 aa8.71□□□□□ -1.02
SMC4-208ENST00000467468 USB1Q9BQ65 265 aaKnown RBP8.71□□□□□ -1.02
SMC4-208ENST00000467468 C6orf229H3BNL8 230 aa8.7□□□□□ -1.02
SMC4-208ENST00000467468 S1PR4O95977 384 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms