RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 LMTK2Q8IWU2 1503 aa21.1■□□□□ 0.97
HDAC6-215ENST00000465457 GCC2Q8IWJ2 1684 aa21.1■□□□□ 0.97
HDAC6-215ENST00000465457 APLP2Q06481 763 aa21.1■□□□□ 0.97
HDAC6-215ENST00000465457 KANK4Q5T7N3 995 aaPredicted RBP21.1■□□□□ 0.97
HDAC6-215ENST00000465457 SLAIN2Q9P270 581 aa21.1■□□□□ 0.97
HDAC6-215ENST00000465457 ABCC5O15440 1437 aa21.1■□□□□ 0.97
HDAC6-215ENST00000465457 SRCAPQ6ZRS2 3230 aa21.09■□□□□ 0.97
HDAC6-215ENST00000465457 RRP7BPQ9NSQ0 103 aa21.09■□□□□ 0.97
HDAC6-215ENST00000465457 NOS1P29475 1434 aa21.08■□□□□ 0.97
HDAC6-215ENST00000465457 AHDC1Q5TGY3 1603 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-215ENST00000465457 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.07■□□□□ 0.96
HDAC6-215ENST00000465457 PTPN23Q9H3S7 1636 aa21.06■□□□□ 0.96
HDAC6-215ENST00000465457 DIP2AQ14689 1571 aa21.06■□□□□ 0.96
HDAC6-215ENST00000465457 ZFYVE9O95405 1425 aa21.05■□□□□ 0.96
HDAC6-215ENST00000465457 FGD6Q6ZV73 1430 aa21.04■□□□□ 0.96
HDAC6-215ENST00000465457 DAPK1P53355 1430 aa21.03■□□□□ 0.96
HDAC6-215ENST00000465457 MEX3CQ5U5Q3 659 aaKnown RBP21.02■□□□□ 0.96
HDAC6-215ENST00000465457 KANK1Q14678 1352 aa21.01■□□□□ 0.95
HDAC6-215ENST00000465457 BCANQ96GW7 911 aa21.01■□□□□ 0.95
HDAC6-215ENST00000465457 SPATA31A6Q5VVP1 1343 aa21.01■□□□□ 0.95
HDAC6-215ENST00000465457 TMEM131LA2VDJ0 1609 aa21■□□□□ 0.95
HDAC6-215ENST00000465457 PLEKHG1Q9ULL1 1385 aa20.99■□□□□ 0.95
HDAC6-215ENST00000465457 ZNF772Q68DY9 489 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-215ENST00000465457 RIMS2Q9UQ26 1411 aa20.97■□□□□ 0.95
HDAC6-215ENST00000465457 CDK12Q9NYV4 1490 aaPredicted RBP20.95■□□□□ 0.94
HDAC6-215ENST00000465457 RGS12O14924 1447 aa20.95■□□□□ 0.94
HDAC6-215ENST00000465457 ADAMTS13Q76LX8 1427 aa20.95■□□□□ 0.94
HDAC6-215ENST00000465457 CHIC2Q9UKJ5 165 aa20.94■□□□□ 0.94
HDAC6-215ENST00000465457 NUTM2BA6NNL0 878 aaPredicted RBP20.93■□□□□ 0.94
HDAC6-215ENST00000465457 NUTM2EB1AL46 878 aaPredicted RBP20.93■□□□□ 0.94
HDAC6-215ENST00000465457 RXRBP28702 533 aa20.93■□□□□ 0.94
HDAC6-215ENST00000465457 NUTM2AQ8IVF1 878 aaPredicted RBP20.93■□□□□ 0.94
HDAC6-215ENST00000465457 NHSL1Q5SYE7 1610 aa20.93■□□□□ 0.94
HDAC6-215ENST00000465457 C14orf37Q86TY3 774 aa20.92■□□□□ 0.94
HDAC6-215ENST00000465457 AFF2P51816 1311 aa20.91■□□□□ 0.94
HDAC6-215ENST00000465457 PPARGC1BQ86YN6 1023 aaKnown RBP20.91■□□□□ 0.94
HDAC6-215ENST00000465457 ASXL1Q8IXJ9 1541 aa20.91■□□□□ 0.94
HDAC6-215ENST00000465457 NCOA3Q9Y6Q9 1424 aa20.9■□□□□ 0.94
HDAC6-215ENST00000465457 PPP1R15AO75807 674 aaPredicted RBP20.9■□□□□ 0.94
HDAC6-215ENST00000465457 NUTM2DQ5VT03 806 aaPredicted RBP20.9■□□□□ 0.94
HDAC6-215ENST00000465457 BRINP3Q76B58 766 aa20.89■□□□□ 0.93
HDAC6-215ENST00000465457 SLC52A1Q9NWF4 448 aa20.89■□□□□ 0.93
HDAC6-215ENST00000465457 RPRD2Q5VT52 1461 aaKnown RBP20.88■□□□□ 0.93
HDAC6-215ENST00000465457 PTPRUQ92729 1446 aa20.88■□□□□ 0.93
HDAC6-215ENST00000465457 ANKRD30AQ9BXX3 1397 aa20.88■□□□□ 0.93
HDAC6-215ENST00000465457 XRN1Q8IZH2 1706 aaKnown RBP20.87■□□□□ 0.93
HDAC6-215ENST00000465457 E9PCH4 1651 aa20.86■□□□□ 0.93
HDAC6-215ENST00000465457 CADPS2Q86UW7 1296 aa20.86■□□□□ 0.93
HDAC6-215ENST00000465457 NRXN3Q9Y4C0 1643 aa20.86■□□□□ 0.93
HDAC6-215ENST00000465457 UNC13BO14795 1591 aa20.85■□□□□ 0.93
HDAC6-215ENST00000465457 TBX22Q9Y458 520 aa20.85■□□□□ 0.93
HDAC6-215ENST00000465457 ADGRL2O95490 1459 aa20.84■□□□□ 0.93
HDAC6-215ENST00000465457 ATF3P18847 181 aa20.84■□□□□ 0.93
HDAC6-215ENST00000465457 C19orf44Q9H6X5 657 aa20.84■□□□□ 0.93
HDAC6-215ENST00000465457 TRPM2O94759 1503 aa20.83■□□□□ 0.93
HDAC6-215ENST00000465457 SETD5Q9C0A6 1442 aa20.83■□□□□ 0.93
HDAC6-215ENST00000465457 MST1RQ04912 1400 aa20.82■□□□□ 0.92
HDAC6-215ENST00000465457 DDX17Q92841 729 aaKnown RBP20.81■□□□□ 0.92
HDAC6-215ENST00000465457 NALCNQ8IZF0 1738 aa20.81■□□□□ 0.92
HDAC6-215ENST00000465457 EP400Q96L91 3159 aa20.81■□□□□ 0.92
HDAC6-215ENST00000465457 HRCP23327 699 aa20.8■□□□□ 0.92
HDAC6-215ENST00000465457 C8orf37Q96NL8 207 aa20.8■□□□□ 0.92
HDAC6-215ENST00000465457 CHGAP10645 457 aaKnown RBP20.79■□□□□ 0.92
HDAC6-215ENST00000465457 PIK3R4Q99570 1358 aa20.79■□□□□ 0.92
HDAC6-215ENST00000465457 DCCP43146 1447 aa20.78■□□□□ 0.92
HDAC6-215ENST00000465457 SETBP1Q9Y6X0 1596 aa20.78■□□□□ 0.92
HDAC6-215ENST00000465457 PNPLA6Q8IY17 1366 aa20.78■□□□□ 0.92
HDAC6-215ENST00000465457 ANKRD50Q9ULJ7 1429 aa20.78■□□□□ 0.92
HDAC6-215ENST00000465457 AMOTL2Q9Y2J4 779 aa20.77■□□□□ 0.92
HDAC6-215ENST00000465457 QTRT2Q9H974 415 aaKnown RBP20.75■□□□□ 0.91
HDAC6-215ENST00000465457 RBM6P78332 1123 aaKnown RBP20.74■□□□□ 0.91
HDAC6-215ENST00000465457 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.73■□□□□ 0.91
HDAC6-215ENST00000465457 IQGAP3Q86VI3 1631 aa20.72■□□□□ 0.91
HDAC6-215ENST00000465457 HDGFP51858 240 aaKnown RBP20.72■□□□□ 0.91
HDAC6-215ENST00000465457 RRBP1Q9P2E9 1410 aaKnown RBP20.7■□□□□ 0.9
HDAC6-215ENST00000465457 LAMC1P11047 1609 aa20.69■□□□□ 0.9
HDAC6-215ENST00000465457 ADAMTS2O95450 1211 aa20.69■□□□□ 0.9
HDAC6-215ENST00000465457 ATAD2Q6PL18 1390 aa20.69■□□□□ 0.9
HDAC6-215ENST00000465457 ADGRL3Q9HAR2 1447 aa20.69■□□□□ 0.9
HDAC6-215ENST00000465457 METP08581 1390 aa20.68■□□□□ 0.9
HDAC6-215ENST00000465457 ZEB1P37275 1124 aaPredicted RBP20.67■□□□□ 0.9
HDAC6-215ENST00000465457 LRRC59Q96AG4 307 aaKnown RBP20.67■□□□□ 0.9
HDAC6-215ENST00000465457 SPHKAPQ2M3C7 1700 aa20.64■□□□□ 0.9
HDAC6-215ENST00000465457 NGLY1Q96IV0 654 aa20.64■□□□□ 0.89
HDAC6-215ENST00000465457 FAM50AQ14320 339 aaKnown RBP20.63■□□□□ 0.89
HDAC6-215ENST00000465457 C1orf167Q5SNV9 1468 aa20.62■□□□□ 0.89
HDAC6-215ENST00000465457 COL22A1Q8NFW1 1626 aaPredicted RBP20.62■□□□□ 0.89
HDAC6-215ENST00000465457 MARF1Q9Y4F3 1742 aaKnown RBP20.61■□□□□ 0.89
HDAC6-215ENST00000465457 ATRNO75882 1429 aa20.61■□□□□ 0.89
HDAC6-215ENST00000465457 USP21Q9UK80 565 aa20.6■□□□□ 0.89
HDAC6-215ENST00000465457 ZRANB1Q9UGI0 708 aa20.59■□□□□ 0.89
HDAC6-215ENST00000465457 NEXMIFQ5QGS0 1516 aa20.58■□□□□ 0.89
HDAC6-215ENST00000465457 CLTCL1P53675 1640 aa20.56■□□□□ 0.88
HDAC6-215ENST00000465457 BRWD3Q6RI45 1802 aa20.55■□□□□ 0.88
HDAC6-215ENST00000465457 PTCH1Q13635 1447 aa20.55■□□□□ 0.88
HDAC6-215ENST00000465457 ORAI2Q96SN7 254 aa20.55■□□□□ 0.88
HDAC6-215ENST00000465457 TRPC5Q9UL62 973 aaPredicted RBP20.55■□□□□ 0.88
HDAC6-215ENST00000465457 SOS2Q07890 1332 aaPredicted RBP20.54■□□□□ 0.88
HDAC6-215ENST00000465457 MYOM2P54296 1465 aa20.54■□□□□ 0.88
HDAC6-215ENST00000465457 BCL9LQ86UU0 1499 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms