RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 ADGRB3O60242 1522 aa23.89■■□□□ 1.41
HDAC6-214ENST00000465269 FGD6Q6ZV73 1430 aa23.88■■□□□ 1.41
HDAC6-214ENST00000465269 KANK4Q5T7N3 995 aaPredicted RBP23.88■■□□□ 1.41
HDAC6-214ENST00000465269 C14orf37Q86TY3 774 aa23.87■■□□□ 1.41
HDAC6-214ENST00000465269 ERBINQ96RT1 1412 aa23.86■■□□□ 1.41
HDAC6-214ENST00000465269 CHD2O14647 1828 aaKnown RBP23.86■■□□□ 1.41
HDAC6-214ENST00000465269 SHPRHQ149N8 1683 aa23.86■■□□□ 1.41
HDAC6-214ENST00000465269 MYOM3Q5VTT5 1437 aa23.85■■□□□ 1.41
HDAC6-214ENST00000465269 AFF2P51816 1311 aa23.84■■□□□ 1.41
HDAC6-214ENST00000465269 KANK1Q14678 1352 aa23.84■■□□□ 1.41
HDAC6-214ENST00000465269 AHDC1Q5TGY3 1603 aaPredicted RBP23.84■■□□□ 1.41
HDAC6-214ENST00000465269 ABCC5O15440 1437 aa23.84■■□□□ 1.41
HDAC6-214ENST00000465269 NOS1P29475 1434 aa23.83■■□□□ 1.4
HDAC6-214ENST00000465269 MYO5BQ9ULV0 1848 aa23.81■■□□□ 1.4
HDAC6-214ENST00000465269 RGS12O14924 1447 aa23.81■■□□□ 1.4
HDAC6-214ENST00000465269 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.81■■□□□ 1.4
HDAC6-214ENST00000465269 ZFYVE9O95405 1425 aa23.8■■□□□ 1.4
HDAC6-214ENST00000465269 DIP2AQ14689 1571 aa23.8■■□□□ 1.4
HDAC6-214ENST00000465269 CDK12Q9NYV4 1490 aaPredicted RBP23.8■■□□□ 1.4
HDAC6-214ENST00000465269 PLEKHG1Q9ULL1 1385 aa23.79■■□□□ 1.4
HDAC6-214ENST00000465269 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
HDAC6-214ENST00000465269 NUTM2DQ5VT03 806 aaPredicted RBP23.79■■□□□ 1.4
HDAC6-214ENST00000465269 CROCC2H7BZ55 1655 aa23.79■■□□□ 1.4
HDAC6-214ENST00000465269 LMTK2Q8IWU2 1503 aa23.79■■□□□ 1.4
HDAC6-214ENST00000465269 CHIC2Q9UKJ5 165 aa23.78■■□□□ 1.4
HDAC6-214ENST00000465269 RIMS2Q9UQ26 1411 aa23.77■■□□□ 1.4
HDAC6-214ENST00000465269 BRINP3Q76B58 766 aa23.77■■□□□ 1.4
HDAC6-214ENST00000465269 ATF3P18847 181 aa23.76■■□□□ 1.39
HDAC6-214ENST00000465269 CADPS2Q86UW7 1296 aa23.75■■□□□ 1.39
HDAC6-214ENST00000465269 C8orf37Q96NL8 207 aa23.74■■□□□ 1.39
HDAC6-214ENST00000465269 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
HDAC6-214ENST00000465269 SLC52A1Q9NWF4 448 aa23.73■■□□□ 1.39
HDAC6-214ENST00000465269 QTRT2Q9H974 415 aaKnown RBP23.72■■□□□ 1.39
HDAC6-214ENST00000465269 TBX22Q9Y458 520 aa23.72■■□□□ 1.39
HDAC6-214ENST00000465269 DAPK1P53355 1430 aa23.72■■□□□ 1.39
HDAC6-214ENST00000465269 GCC2Q8IWJ2 1684 aa23.72■■□□□ 1.39
HDAC6-214ENST00000465269 ADAMTS13Q76LX8 1427 aa23.71■■□□□ 1.39
HDAC6-214ENST00000465269 DDX17Q92841 729 aaKnown RBP23.71■■□□□ 1.39
HDAC6-214ENST00000465269 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.38
HDAC6-214ENST00000465269 EP400Q96L91 3159 aa23.69■■□□□ 1.38
HDAC6-214ENST00000465269 CHGAP10645 457 aaKnown RBP23.69■■□□□ 1.38
HDAC6-214ENST00000465269 PTPN23Q9H3S7 1636 aa23.69■■□□□ 1.38
HDAC6-214ENST00000465269 RBM6P78332 1123 aaKnown RBP23.68■■□□□ 1.38
HDAC6-214ENST00000465269 VPS8Q8N3P4 1428 aa23.67■■□□□ 1.38
HDAC6-214ENST00000465269 TMEM131LA2VDJ0 1609 aa23.67■■□□□ 1.38
HDAC6-214ENST00000465269 ASXL1Q8IXJ9 1541 aa23.67■■□□□ 1.38
HDAC6-214ENST00000465269 PTPRUQ92729 1446 aa23.66■■□□□ 1.38
HDAC6-214ENST00000465269 SETBP1Q9Y6X0 1596 aa23.65■■□□□ 1.38
HDAC6-214ENST00000465269 AMOTL2Q9Y2J4 779 aa23.64■■□□□ 1.37
HDAC6-214ENST00000465269 SETD5Q9C0A6 1442 aa23.64■■□□□ 1.37
HDAC6-214ENST00000465269 ADAMTS2O95450 1211 aa23.63■■□□□ 1.37
HDAC6-214ENST00000465269 ANKRD30AQ9BXX3 1397 aa23.63■■□□□ 1.37
HDAC6-214ENST00000465269 NHSL1Q5SYE7 1610 aa23.6■■□□□ 1.37
HDAC6-214ENST00000465269 HDGFP51858 240 aaKnown RBP23.6■■□□□ 1.37
HDAC6-214ENST00000465269 PNPLA6Q8IY17 1366 aa23.6■■□□□ 1.37
HDAC6-214ENST00000465269 MST1RQ04912 1400 aa23.59■■□□□ 1.37
HDAC6-214ENST00000465269 NGLY1Q96IV0 654 aa23.59■■□□□ 1.37
HDAC6-214ENST00000465269 ZRANB1Q9UGI0 708 aa23.58■■□□□ 1.37
HDAC6-214ENST00000465269 ATAD2Q6PL18 1390 aa23.57■■□□□ 1.36
HDAC6-214ENST00000465269 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
HDAC6-214ENST00000465269 LRRC59Q96AG4 307 aaKnown RBP23.57■■□□□ 1.36
HDAC6-214ENST00000465269 RPRD2Q5VT52 1461 aaKnown RBP23.56■■□□□ 1.36
HDAC6-214ENST00000465269 PIK3R4Q99570 1358 aa23.55■■□□□ 1.36
HDAC6-214ENST00000465269 TRPM2O94759 1503 aa23.54■■□□□ 1.36
HDAC6-214ENST00000465269 DCCP43146 1447 aa23.52■■□□□ 1.36
HDAC6-214ENST00000465269 UNC13BO14795 1591 aa23.51■■□□□ 1.35
HDAC6-214ENST00000465269 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
HDAC6-214ENST00000465269 USP21Q9UK80 565 aa23.5■■□□□ 1.35
HDAC6-214ENST00000465269 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
HDAC6-214ENST00000465269 ANKRD50Q9ULJ7 1429 aa23.48■■□□□ 1.35
HDAC6-214ENST00000465269 ADGRL2O95490 1459 aa23.46■■□□□ 1.35
HDAC6-214ENST00000465269 NRXN3Q9Y4C0 1643 aa23.46■■□□□ 1.35
HDAC6-214ENST00000465269 E9PCH4 1651 aa23.45■■□□□ 1.34
HDAC6-214ENST00000465269 METP08581 1390 aa23.45■■□□□ 1.34
HDAC6-214ENST00000465269 TRPC5Q9UL62 973 aaPredicted RBP23.44■■□□□ 1.34
HDAC6-214ENST00000465269 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
HDAC6-214ENST00000465269 ATRNO75882 1429 aa23.42■■□□□ 1.34
HDAC6-214ENST00000465269 ADGRL3Q9HAR2 1447 aa23.42■■□□□ 1.34
HDAC6-214ENST00000465269 ORAI2Q96SN7 254 aa23.4■■□□□ 1.34
HDAC6-214ENST00000465269 C1orf167Q5SNV9 1468 aa23.39■■□□□ 1.34
HDAC6-214ENST00000465269 FAM50AQ14320 339 aaKnown RBP23.39■■□□□ 1.33
HDAC6-214ENST00000465269 FNBP4Q8N3X1 1017 aaPredicted RBP23.39■■□□□ 1.33
HDAC6-214ENST00000465269 FOXD1Q16676 465 aa23.37■■□□□ 1.33
HDAC6-214ENST00000465269 SOS2Q07890 1332 aaPredicted RBP23.34■■□□□ 1.33
HDAC6-214ENST00000465269 DEFB132Q7Z7B7 95 aa23.34■■□□□ 1.33
HDAC6-214ENST00000465269 BCL9LQ86UU0 1499 aa23.33■■□□□ 1.33
HDAC6-214ENST00000465269 PTCH1Q13635 1447 aa23.33■■□□□ 1.32
HDAC6-214ENST00000465269 APLP2Q06481 763 aa23.32■■□□□ 1.32
HDAC6-214ENST00000465269 ZNF326Q5BKZ1 582 aaKnown RBP23.32■■□□□ 1.32
HDAC6-214ENST00000465269 CCDC125Q86Z20 511 aa23.31■■□□□ 1.32
HDAC6-214ENST00000465269 LAMC1P11047 1609 aa23.3■■□□□ 1.32
HDAC6-214ENST00000465269 IQGAP3Q86VI3 1631 aa23.27■■□□□ 1.32
HDAC6-214ENST00000465269 XPCQ01831 940 aaPredicted RBP23.27■■□□□ 1.32
HDAC6-214ENST00000465269 GJD4Q96KN9 370 aaPredicted RBP23.27■■□□□ 1.32
HDAC6-214ENST00000465269 MYOM2P54296 1465 aa23.27■■□□□ 1.32
HDAC6-214ENST00000465269 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
HDAC6-214ENST00000465269 NUP155O75694 1391 aa23.25■■□□□ 1.31
HDAC6-214ENST00000465269 ROBO2Q9HCK4 1378 aa23.25■■□□□ 1.31
HDAC6-214ENST00000465269 BLMP54132 1417 aaPredicted RBP23.24■■□□□ 1.31
HDAC6-214ENST00000465269 PSDA5PKW4 1024 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms