RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ZNF142P52746 1687 aaPredicted RBP24.26■■□□□ 1.47
EXOSC3-203ENST00000465229 STAC3Q96MF2 364 aa24.25■■□□□ 1.47
EXOSC3-203ENST00000465229 RIMS2Q9UQ26 1411 aa24.25■■□□□ 1.47
EXOSC3-203ENST00000465229 ZFYVE9O95405 1425 aa24.24■■□□□ 1.47
EXOSC3-203ENST00000465229 NEXMIFQ5QGS0 1516 aa24.23■■□□□ 1.47
EXOSC3-203ENST00000465229 VGFO15240 615 aaPredicted RBP24.23■■□□□ 1.47
EXOSC3-203ENST00000465229 LTKP29376 864 aa24.22■■□□□ 1.47
EXOSC3-203ENST00000465229 HDGFP51858 240 aaKnown RBP24.22■■□□□ 1.47
EXOSC3-203ENST00000465229 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.22■■□□□ 1.47
EXOSC3-203ENST00000465229 ADGRF5Q8IZF2 1346 aa24.22■■□□□ 1.47
EXOSC3-203ENST00000465229 ARHGAP23Q9P227 1491 aa24.22■■□□□ 1.47
EXOSC3-203ENST00000465229 SLIT1O75093 1534 aa24.21■■□□□ 1.47
EXOSC3-203ENST00000465229 LMTK3Q96Q04 1460 aa24.21■■□□□ 1.47
EXOSC3-203ENST00000465229 TXNDC2Q86VQ3 553 aa24.21■■□□□ 1.47
EXOSC3-203ENST00000465229 HSPA2P54652 639 aa24.19■■□□□ 1.46
EXOSC3-203ENST00000465229 NBPF8Q3BBV2 869 aa24.19■■□□□ 1.46
EXOSC3-203ENST00000465229 EID1Q9Y6B2 187 aa24.19■■□□□ 1.46
EXOSC3-203ENST00000465229 MYOM2P54296 1465 aa24.18■■□□□ 1.46
EXOSC3-203ENST00000465229 PPLO60437 1756 aa24.18■■□□□ 1.46
EXOSC3-203ENST00000465229 ANKLE2Q86XL3 938 aa24.17■■□□□ 1.46
EXOSC3-203ENST00000465229 IFT172Q9UG01 1749 aa24.17■■□□□ 1.46
EXOSC3-203ENST00000465229 NRXN1Q9ULB1 1477 aa24.15■■□□□ 1.46
EXOSC3-203ENST00000465229 PRAG1Q86YV5 1406 aa24.15■■□□□ 1.46
EXOSC3-203ENST00000465229 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
EXOSC3-203ENST00000465229 SCAF11Q99590 1463 aaKnown RBP24.12■■□□□ 1.45
EXOSC3-203ENST00000465229 ZNF316A6NFI3 1004 aaPredicted RBP24.11■■□□□ 1.45
EXOSC3-203ENST00000465229 PIK3C2GO75747 1445 aa24.11■■□□□ 1.45
EXOSC3-203ENST00000465229 NCKAP5LQ9HCH0 1330 aa24.1■■□□□ 1.45
EXOSC3-203ENST00000465229 PLEKHG1Q9ULL1 1385 aa24.1■■□□□ 1.45
EXOSC3-203ENST00000465229 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
EXOSC3-203ENST00000465229 CFAP70Q5T0N1 1121 aa24.09■■□□□ 1.45
EXOSC3-203ENST00000465229 C14orf93Q9H972 538 aaKnown RBP24.09■■□□□ 1.45
EXOSC3-203ENST00000465229 BCANQ96GW7 911 aa24.07■■□□□ 1.44
EXOSC3-203ENST00000465229 NBPF1Q3BBV0 1214 aa24.06■■□□□ 1.44
EXOSC3-203ENST00000465229 MED14O60244 1454 aa24.03■■□□□ 1.44
EXOSC3-203ENST00000465229 SLC26A8Q96RN1 970 aa24.02■■□□□ 1.44
EXOSC3-203ENST00000465229 ADAMTS13Q76LX8 1427 aa24.02■■□□□ 1.44
EXOSC3-203ENST00000465229 SETBP1Q9Y6X0 1596 aa24.02■■□□□ 1.44
EXOSC3-203ENST00000465229 NPHP4O75161 1426 aaPredicted RBP24.01■■□□□ 1.43
EXOSC3-203ENST00000465229 RALGAPBQ86X10 1494 aa24■■□□□ 1.43
EXOSC3-203ENST00000465229 TBX22Q9Y458 520 aa24■■□□□ 1.43
EXOSC3-203ENST00000465229 ALKQ9UM73 1620 aa24■■□□□ 1.43
EXOSC3-203ENST00000465229 NRXN3Q9Y4C0 1643 aa24■■□□□ 1.43
EXOSC3-203ENST00000465229 TMEM132EQ6IEE7 984 aa23.99■■□□□ 1.43
EXOSC3-203ENST00000465229 ROCK2O75116 1388 aaKnown RBP23.99■■□□□ 1.43
EXOSC3-203ENST00000465229 TRPM1Q7Z4N2 1603 aa23.98■■□□□ 1.43
EXOSC3-203ENST00000465229 GPRASP1Q5JY77 1395 aa23.97■■□□□ 1.43
EXOSC3-203ENST00000465229 POLR1AO95602 1720 aaPredicted RBP23.96■■□□□ 1.43
EXOSC3-203ENST00000465229 METP08581 1390 aa23.96■■□□□ 1.43
EXOSC3-203ENST00000465229 IQGAP1P46940 1657 aa23.96■■□□□ 1.43
EXOSC3-203ENST00000465229 DIEXFQ68CQ4 756 aaKnown RBP23.95■■□□□ 1.43
EXOSC3-203ENST00000465229 CARD11Q9BXL7 1154 aa23.95■■□□□ 1.43
EXOSC3-203ENST00000465229 STRCQ7RTU9 1775 aa23.95■■□□□ 1.43
EXOSC3-203ENST00000465229 KIAA1210Q9ULL0 1709 aa23.95■■□□□ 1.42
EXOSC3-203ENST00000465229 ADGRB1O14514 1584 aa23.93■■□□□ 1.42
EXOSC3-203ENST00000465229 LAMC1P11047 1609 aa23.92■■□□□ 1.42
EXOSC3-203ENST00000465229 ASXL1Q8IXJ9 1541 aa23.91■■□□□ 1.42
EXOSC3-203ENST00000465229 SETD1AO15047 1707 aaKnown RBP23.9■■□□□ 1.42
EXOSC3-203ENST00000465229 DIP2AQ14689 1571 aa23.89■■□□□ 1.42
EXOSC3-203ENST00000465229 STK26Q9P289 416 aa23.89■■□□□ 1.42
EXOSC3-203ENST00000465229 DMRT2Q9Y5R5 561 aa23.88■■□□□ 1.41
EXOSC3-203ENST00000465229 YTHDC2Q9H6S0 1430 aaKnown RBP23.88■■□□□ 1.41
EXOSC3-203ENST00000465229 TRAK1Q9UPV9 953 aa23.87■■□□□ 1.41
EXOSC3-203ENST00000465229 LRPPRCP42704 1394 aaKnown RBP23.86■■□□□ 1.41
EXOSC3-203ENST00000465229 PIK3R4Q99570 1358 aa23.86■■□□□ 1.41
EXOSC3-203ENST00000465229 PTPRUQ92729 1446 aa23.86■■□□□ 1.41
EXOSC3-203ENST00000465229 AMOTL2Q9Y2J4 779 aa23.85■■□□□ 1.41
EXOSC3-203ENST00000465229 ABCC11Q96J66 1382 aa23.85■■□□□ 1.41
EXOSC3-203ENST00000465229 EIF4G2P78344 907 aaKnown RBP eCLIP23.83■■□□□ 1.41
EXOSC3-203ENST00000465229 USP47Q96K76 1375 aa23.83■■□□□ 1.4
EXOSC3-203ENST00000465229 KCNA6P17658 529 aa23.81■■□□□ 1.4
EXOSC3-203ENST00000465229 HSPA5P11021 654 aaKnown RBP23.81■■□□□ 1.4
EXOSC3-203ENST00000465229 ST20-MTHFSA0A0A6YYL1 179 aa23.79■■□□□ 1.4
EXOSC3-203ENST00000465229 TECPR2O15040 1411 aa23.78■■□□□ 1.4
EXOSC3-203ENST00000465229 SIRT1Q96EB6 747 aa23.78■■□□□ 1.4
EXOSC3-203ENST00000465229 HIRIP3Q9BW71 556 aaPredicted RBP23.77■■□□□ 1.4
EXOSC3-203ENST00000465229 ROBO2Q9HCK4 1378 aa23.77■■□□□ 1.4
EXOSC3-203ENST00000465229 WAPLQ7Z5K2 1190 aa23.77■■□□□ 1.4
EXOSC3-203ENST00000465229 PRAM1Q96QH2 718 aa23.76■■□□□ 1.39
EXOSC3-203ENST00000465229 EIF3AQ14152 1382 aaKnown RBP23.75■■□□□ 1.39
EXOSC3-203ENST00000465229 CHD2O14647 1828 aaKnown RBP23.75■■□□□ 1.39
EXOSC3-203ENST00000465229 DLC1Q96QB1 1528 aa23.74■■□□□ 1.39
EXOSC3-203ENST00000465229 CENPJQ9HC77 1338 aaPredicted RBP23.74■■□□□ 1.39
EXOSC3-203ENST00000465229 POGKQ9P215 609 aa23.73■■□□□ 1.39
EXOSC3-203ENST00000465229 ZNF335Q9H4Z2 1342 aaPredicted RBP23.73■■□□□ 1.39
EXOSC3-203ENST00000465229 FAM135BQ49AJ0 1406 aa23.73■■□□□ 1.39
EXOSC3-203ENST00000465229 PLEKHH1Q9ULM0 1364 aa23.73■■□□□ 1.39
EXOSC3-203ENST00000465229 XRN1Q8IZH2 1706 aaKnown RBP23.73■■□□□ 1.39
EXOSC3-203ENST00000465229 SAFB2Q14151 953 aaKnown RBP eCLIP23.72■■□□□ 1.39
EXOSC3-203ENST00000465229 PTCH1Q13635 1447 aa23.71■■□□□ 1.39
EXOSC3-203ENST00000465229 TESK2Q96S53 571 aa23.71■■□□□ 1.39
EXOSC3-203ENST00000465229 CPS1P31327 1500 aa23.71■■□□□ 1.39
EXOSC3-203ENST00000465229 KNDC1Q76NI1 1749 aa23.7■■□□□ 1.38
EXOSC3-203ENST00000465229 NWD1Q149M9 1564 aa23.7■■□□□ 1.38
EXOSC3-203ENST00000465229 ARHGEF28Q8N1W1 1705 aaKnown RBP23.7■■□□□ 1.38
EXOSC3-203ENST00000465229 PROSER2Q86WR7 435 aaPredicted RBP23.67■■□□□ 1.38
EXOSC3-203ENST00000465229 RBM33Q96EV2 1170 aaKnown RBP23.66■■□□□ 1.38
EXOSC3-203ENST00000465229 STRCP1A6NGW2 1772 aa23.66■■□□□ 1.38
EXOSC3-203ENST00000465229 NKTRP30414 1462 aaKnown RBP23.66■■□□□ 1.38
EXOSC3-203ENST00000465229 MINK1Q8N4C8 1332 aaPredicted RBP23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms