RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-206ENST00000464605 CHGAP10645 457 aaKnown RBP33.23■■■□□ 2.91
UBA3-206ENST00000464605 CLTCL1P53675 1640 aa33.23■■■□□ 2.91
UBA3-206ENST00000464605 SLC4A1APQ9BWU0 796 aaKnown RBP33.2■■■□□ 2.91
UBA3-206ENST00000464605 LRRC7Q96NW7 1537 aa33.18■■■□□ 2.9
UBA3-206ENST00000464605 SETD5Q9C0A6 1442 aa33.18■■■□□ 2.9
UBA3-206ENST00000464605 PIP4K2BP78356 416 aa33.16■■■□□ 2.9
UBA3-206ENST00000464605 PLEKHG1Q9ULL1 1385 aa33.16■■■□□ 2.9
UBA3-206ENST00000464605 KIF1BO60333 1816 aa33.16■■■□□ 2.9
UBA3-206ENST00000464605 SLC26A8Q96RN1 970 aa33.15■■■□□ 2.9
UBA3-206ENST00000464605 HDGFP51858 240 aaKnown RBP33.14■■■□□ 2.9
UBA3-206ENST00000464605 ALKQ9UM73 1620 aa33.13■■■□□ 2.89
UBA3-206ENST00000464605 SCAF1Q9H7N4 1312 aaKnown RBP33.13■■■□□ 2.89
UBA3-206ENST00000464605 XIRP1Q702N8 1843 aaKnown RBP33.12■■■□□ 2.89
UBA3-206ENST00000464605 ILDR2Q71H61 639 aa33.12■■■□□ 2.89
UBA3-206ENST00000464605 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.12■■■□□ 2.89
UBA3-206ENST00000464605 NUTM2DQ5VT03 806 aaPredicted RBP33.11■■■□□ 2.89
UBA3-206ENST00000464605 HSPA1LP34931 641 aa33.1■■■□□ 2.89
UBA3-206ENST00000464605 MPHOSPH9Q99550 1183 aa33.1■■■□□ 2.89
UBA3-206ENST00000464605 FOXD1Q16676 465 aa33.09■■■□□ 2.89
UBA3-206ENST00000464605 PPP1R15AO75807 674 aaPredicted RBP33.08■■■□□ 2.89
UBA3-206ENST00000464605 SENP3Q9H4L4 574 aaPredicted RBP33.08■■■□□ 2.89
UBA3-206ENST00000464605 CHD2O14647 1828 aaKnown RBP33.07■■■□□ 2.89
UBA3-206ENST00000464605 RAB3GAP2Q9H2M9 1393 aa33.07■■■□□ 2.88
UBA3-206ENST00000464605 ADAMTS13Q76LX8 1427 aa33.05■■■□□ 2.88
UBA3-206ENST00000464605 KCNA6P17658 529 aa33.05■■■□□ 2.88
UBA3-206ENST00000464605 BCANQ96GW7 911 aa33.04■■■□□ 2.88
UBA3-206ENST00000464605 NWD1Q149M9 1564 aa33.04■■■□□ 2.88
UBA3-206ENST00000464605 ACIN1Q9UKV3 1341 aaKnown RBP33.02■■■□□ 2.88
UBA3-206ENST00000464605 NEXMIFQ5QGS0 1516 aa33.02■■■□□ 2.88
UBA3-206ENST00000464605 TBX22Q9Y458 520 aa33.02■■■□□ 2.88
UBA3-206ENST00000464605 NRXN3Q9Y4C0 1643 aa33.01■■■□□ 2.87
UBA3-206ENST00000464605 ZNF326Q5BKZ1 582 aaKnown RBP33■■■□□ 2.87
UBA3-206ENST00000464605 DIP2AQ14689 1571 aa32.98■■■□□ 2.87
UBA3-206ENST00000464605 SETBP1Q9Y6X0 1596 aa32.96■■■□□ 2.87
UBA3-206ENST00000464605 NKTRP30414 1462 aaKnown RBP32.93■■■□□ 2.86
UBA3-206ENST00000464605 PPLO60437 1756 aa32.92■■■□□ 2.86
UBA3-206ENST00000464605 TMEM94Q12767 1356 aa32.91■■■□□ 2.86
UBA3-206ENST00000464605 HRCP23327 699 aa32.9■■■□□ 2.86
UBA3-206ENST00000464605 CCDC144AA2RUR9 1427 aa32.89■■■□□ 2.86
UBA3-206ENST00000464605 PIK3R4Q99570 1358 aa32.89■■■□□ 2.86
UBA3-206ENST00000464605 SOCS7O14512 581 aa32.88■■■□□ 2.85
UBA3-206ENST00000464605 PROSER2Q86WR7 435 aaPredicted RBP32.88■■■□□ 2.85
UBA3-206ENST00000464605 RBM33Q96EV2 1170 aaKnown RBP32.87■■■□□ 2.85
UBA3-206ENST00000464605 SPATA31E1Q6ZUB1 1445 aa32.86■■■□□ 2.85
UBA3-206ENST00000464605 PTPRUQ92729 1446 aa32.86■■■□□ 2.85
UBA3-206ENST00000464605 RPGRIP1LQ68CZ1 1315 aa32.86■■■□□ 2.85
UBA3-206ENST00000464605 MED1Q15648 1581 aaPredicted RBP32.83■■■□□ 2.85
UBA3-206ENST00000464605 SETD1AO15047 1707 aaKnown RBP32.82■■■□□ 2.84
UBA3-206ENST00000464605 IFT172Q9UG01 1749 aa32.82■■■□□ 2.84
UBA3-206ENST00000464605 VGFO15240 615 aaPredicted RBP32.8■■■□□ 2.84
UBA3-206ENST00000464605 METP08581 1390 aa32.8■■■□□ 2.84
UBA3-206ENST00000464605 XRN1Q8IZH2 1706 aaKnown RBP32.8■■■□□ 2.84
UBA3-206ENST00000464605 AMOTL2Q9Y2J4 779 aa32.78■■■□□ 2.84
UBA3-206ENST00000464605 FAM135BQ49AJ0 1406 aa32.77■■■□□ 2.84
UBA3-206ENST00000464605 RGL3Q3MIN7 710 aa32.75■■■□□ 2.83
UBA3-206ENST00000464605 ANKRD30BQ9BXX2 1392 aa32.74■■■□□ 2.83
UBA3-206ENST00000464605 NCOA3Q9Y6Q9 1424 aa32.73■■■□□ 2.83
UBA3-206ENST00000464605 ADGRF5Q8IZF2 1346 aa32.7■■■□□ 2.82
UBA3-206ENST00000464605 MSH6P52701 1360 aa32.68■■■□□ 2.82
UBA3-206ENST00000464605 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.67■■■□□ 2.82
UBA3-206ENST00000464605 ROBO1Q9Y6N7 1651 aa32.6■■■□□ 2.81
UBA3-206ENST00000464605 PHF23Q9BUL5 403 aaPredicted RBP32.59■■■□□ 2.81
UBA3-206ENST00000464605 C19orf44Q9H6X5 657 aa32.59■■■□□ 2.81
UBA3-206ENST00000464605 SLAIN2Q9P270 581 aa32.59■■■□□ 2.81
UBA3-206ENST00000464605 PIK3C2GO75747 1445 aa32.59■■■□□ 2.81
UBA3-206ENST00000464605 PRAG1Q86YV5 1406 aa32.57■■■□□ 2.8
UBA3-206ENST00000464605 NRXN1Q9ULB1 1477 aa32.56■■■□□ 2.8
UBA3-206ENST00000464605 C14orf37Q86TY3 774 aa32.56■■■□□ 2.8
UBA3-206ENST00000464605 NALCNQ8IZF0 1738 aa32.54■■■□□ 2.8
UBA3-206ENST00000464605 MYOM2P54296 1465 aa32.54■■■□□ 2.8
UBA3-206ENST00000464605 PTCH1Q13635 1447 aa32.53■■■□□ 2.8
UBA3-206ENST00000464605 ASXL1Q8IXJ9 1541 aa32.53■■■□□ 2.8
UBA3-206ENST00000464605 ROBO2Q9HCK4 1378 aa32.53■■■□□ 2.8
UBA3-206ENST00000464605 CADPS2Q86UW7 1296 aa32.5■■■□□ 2.79
UBA3-206ENST00000464605 DCCP43146 1447 aa32.49■■■□□ 2.79
UBA3-206ENST00000464605 ADGRL3Q9HAR2 1447 aa32.48■■■□□ 2.79
UBA3-206ENST00000464605 ATF3P18847 181 aa32.47■■■□□ 2.79
UBA3-206ENST00000464605 C14orf93Q9H972 538 aaKnown RBP32.46■■■□□ 2.79
UBA3-206ENST00000464605 TMEM132EQ6IEE7 984 aa32.45■■■□□ 2.79
UBA3-206ENST00000464605 RGS17Q9UGC6 210 aaPredicted RBP32.45■■■□□ 2.79
UBA3-206ENST00000464605 KNDC1Q76NI1 1749 aa32.44■■■□□ 2.78
UBA3-206ENST00000464605 DHX57Q6P158 1386 aaKnown RBP32.44■■■□□ 2.78
UBA3-206ENST00000464605 TECPR2O15040 1411 aa32.43■■■□□ 2.78
UBA3-206ENST00000464605 LAMC1P11047 1609 aa32.43■■■□□ 2.78
UBA3-206ENST00000464605 LRPPRCP42704 1394 aaKnown RBP32.43■■■□□ 2.78
UBA3-206ENST00000464605 CFAP70Q5T0N1 1121 aa32.41■■■□□ 2.78
UBA3-206ENST00000464605 MST1RQ04912 1400 aa32.41■■■□□ 2.78
UBA3-206ENST00000464605 ABCC11Q96J66 1382 aa32.4■■■□□ 2.78
UBA3-206ENST00000464605 PHLPP1O60346 1717 aa32.4■■■□□ 2.78
UBA3-206ENST00000464605 YTHDC2Q9H6S0 1430 aaKnown RBP32.38■■■□□ 2.77
UBA3-206ENST00000464605 DCAF11Q8TEB1 546 aa32.38■■■□□ 2.77
UBA3-206ENST00000464605 STK26Q9P289 416 aa32.38■■■□□ 2.77
UBA3-206ENST00000464605 JCADQ9P266 1359 aa32.35■■■□□ 2.77
UBA3-206ENST00000464605 TRIM26Q12899 539 aaPredicted RBP32.35■■■□□ 2.77
UBA3-206ENST00000464605 KDM2AQ9Y2K7 1162 aa32.35■■■□□ 2.77
UBA3-206ENST00000464605 BRINP3Q76B58 766 aa32.34■■■□□ 2.77
UBA3-206ENST00000464605 COL16A1Q07092 1604 aaPredicted RBP32.33■■■□□ 2.77
UBA3-206ENST00000464605 WAPLQ7Z5K2 1190 aa32.33■■■□□ 2.77
UBA3-206ENST00000464605 STAC3Q96MF2 364 aa32.33■■■□□ 2.77
UBA3-206ENST00000464605 AHDC1Q5TGY3 1603 aaPredicted RBP32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms