RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 RPGRIP1LQ68CZ1 1315 aa21.52■■□□□ 1.03
ABCF3-204ENST00000463685 IFT172Q9UG01 1749 aa21.52■■□□□ 1.03
ABCF3-204ENST00000463685 PPLO60437 1756 aa21.51■■□□□ 1.03
ABCF3-204ENST00000463685 KDM5AP29375 1690 aaKnown RBP21.51■■□□□ 1.03
ABCF3-204ENST00000463685 NBPF8Q3BBV2 869 aa21.51■■□□□ 1.03
ABCF3-204ENST00000463685 ADGRF5Q8IZF2 1346 aa21.5■■□□□ 1.03
ABCF3-204ENST00000463685 TMEM2Q9UHN6 1383 aa21.49■■□□□ 1.03
ABCF3-204ENST00000463685 THEMISQ8N1K5 641 aaPredicted RBP21.49■■□□□ 1.03
ABCF3-204ENST00000463685 ZFYVE9O95405 1425 aa21.48■■□□□ 1.03
ABCF3-204ENST00000463685 MYOM2P54296 1465 aa21.46■■□□□ 1.03
ABCF3-204ENST00000463685 PRAG1Q86YV5 1406 aa21.46■■□□□ 1.03
ABCF3-204ENST00000463685 LTKP29376 864 aa21.45■■□□□ 1.02
ABCF3-204ENST00000463685 ARHGAP23Q9P227 1491 aa21.45■■□□□ 1.02
ABCF3-204ENST00000463685 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
ABCF3-204ENST00000463685 TXNDC2Q86VQ3 553 aa21.44■■□□□ 1.02
ABCF3-204ENST00000463685 SLIT1O75093 1534 aa21.44■■□□□ 1.02
ABCF3-204ENST00000463685 HSPA2P54652 639 aa21.43■■□□□ 1.02
ABCF3-204ENST00000463685 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.43■■□□□ 1.02
ABCF3-204ENST00000463685 LMTK3Q96Q04 1460 aa21.42■■□□□ 1.02
ABCF3-204ENST00000463685 NRXN1Q9ULB1 1477 aa21.42■■□□□ 1.02
ABCF3-204ENST00000463685 STAC3Q96MF2 364 aa21.41■■□□□ 1.02
ABCF3-204ENST00000463685 EID1Q9Y6B2 187 aa21.41■■□□□ 1.02
ABCF3-204ENST00000463685 PIK3C2GO75747 1445 aa21.39■■□□□ 1.02
ABCF3-204ENST00000463685 HDGFP51858 240 aaKnown RBP21.39■■□□□ 1.01
ABCF3-204ENST00000463685 CFAP70Q5T0N1 1121 aa21.38■■□□□ 1.01
ABCF3-204ENST00000463685 SCAF11Q99590 1463 aaKnown RBP21.38■■□□□ 1.01
ABCF3-204ENST00000463685 NCKAP5LQ9HCH0 1330 aa21.37■■□□□ 1.01
ABCF3-204ENST00000463685 NBPF1Q3BBV0 1214 aa21.37■■□□□ 1.01
ABCF3-204ENST00000463685 BCANQ96GW7 911 aa21.37■■□□□ 1.01
ABCF3-204ENST00000463685 ANKLE2Q86XL3 938 aa21.36■■□□□ 1.01
ABCF3-204ENST00000463685 TRPM1Q7Z4N2 1603 aa21.36■■□□□ 1.01
ABCF3-204ENST00000463685 RALGAPBQ86X10 1494 aa21.35■■□□□ 1.01
ABCF3-204ENST00000463685 PLEKHG1Q9ULL1 1385 aa21.34■■□□□ 1.01
ABCF3-204ENST00000463685 C14orf93Q9H972 538 aaKnown RBP21.33■■□□□ 1.01
ABCF3-204ENST00000463685 IQGAP1P46940 1657 aa21.33■■□□□ 1
ABCF3-204ENST00000463685 NRXN3Q9Y4C0 1643 aa21.33■■□□□ 1
ABCF3-204ENST00000463685 ROCK2O75116 1388 aaKnown RBP21.32■■□□□ 1
ABCF3-204ENST00000463685 ALKQ9UM73 1620 aa21.31■■□□□ 1
ABCF3-204ENST00000463685 SETBP1Q9Y6X0 1596 aa21.31■■□□□ 1
ABCF3-204ENST00000463685 TMEM132EQ6IEE7 984 aa21.3■■□□□ 1
ABCF3-204ENST00000463685 SLC26A8Q96RN1 970 aa21.3■■□□□ 1
ABCF3-204ENST00000463685 POLR1AO95602 1720 aaPredicted RBP21.29■■□□□ 1
ABCF3-204ENST00000463685 KIAA1210Q9ULL0 1709 aa21.29■■□□□ 1
ABCF3-204ENST00000463685 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
ABCF3-204ENST00000463685 CARD11Q9BXL7 1154 aa21.28■■□□□ 1
ABCF3-204ENST00000463685 NPHP4O75161 1426 aaPredicted RBP21.28■■□□□ 1
ABCF3-204ENST00000463685 ASXL1Q8IXJ9 1541 aa21.27■■□□□ 1
ABCF3-204ENST00000463685 AEBP2Q6ZN18 517 aaPredicted RBP21.26■□□□□ 0.99
ABCF3-204ENST00000463685 SETD1AO15047 1707 aaKnown RBP21.26■□□□□ 0.99
ABCF3-204ENST00000463685 LAMC1P11047 1609 aa21.26■□□□□ 0.99
ABCF3-204ENST00000463685 METP08581 1390 aa21.25■□□□□ 0.99
ABCF3-204ENST00000463685 GPRASP1Q5JY77 1395 aa21.25■□□□□ 0.99
ABCF3-204ENST00000463685 ADGRB1O14514 1584 aa21.25■□□□□ 0.99
ABCF3-204ENST00000463685 MED14O60244 1454 aa21.24■□□□□ 0.99
ABCF3-204ENST00000463685 STRCQ7RTU9 1775 aa21.23■□□□□ 0.99
ABCF3-204ENST00000463685 STK26Q9P289 416 aa21.23■□□□□ 0.99
ABCF3-204ENST00000463685 HIRIP3Q9BW71 556 aaPredicted RBP21.21■□□□□ 0.99
ABCF3-204ENST00000463685 TBX22Q9Y458 520 aa21.21■□□□□ 0.99
ABCF3-204ENST00000463685 TRAK1Q9UPV9 953 aa21.2■□□□□ 0.98
ABCF3-204ENST00000463685 USP47Q96K76 1375 aa21.2■□□□□ 0.98
ABCF3-204ENST00000463685 HSPA5P11021 654 aaKnown RBP21.19■□□□□ 0.98
ABCF3-204ENST00000463685 YTHDC2Q9H6S0 1430 aaKnown RBP21.19■□□□□ 0.98
ABCF3-204ENST00000463685 DIP2AQ14689 1571 aa21.19■□□□□ 0.98
ABCF3-204ENST00000463685 PTPRUQ92729 1446 aa21.18■□□□□ 0.98
ABCF3-204ENST00000463685 EIF4G2P78344 907 aaKnown RBP eCLIP21.17■□□□□ 0.98
ABCF3-204ENST00000463685 LRPPRCP42704 1394 aaKnown RBP21.16■□□□□ 0.98
ABCF3-204ENST00000463685 ST20-MTHFSA0A0A6YYL1 179 aa21.13■□□□□ 0.97
ABCF3-204ENST00000463685 AMOTL2Q9Y2J4 779 aa21.12■□□□□ 0.97
ABCF3-204ENST00000463685 ABCC11Q96J66 1382 aa21.1■□□□□ 0.97
ABCF3-204ENST00000463685 ARHGEF28Q8N1W1 1705 aaKnown RBP21.09■□□□□ 0.97
ABCF3-204ENST00000463685 SAFB2Q14151 953 aaKnown RBP eCLIP21.09■□□□□ 0.97
ABCF3-204ENST00000463685 PIK3R4Q99570 1358 aa21.09■□□□□ 0.97
ABCF3-204ENST00000463685 ROBO2Q9HCK4 1378 aa21.09■□□□□ 0.97
ABCF3-204ENST00000463685 PLEKHH1Q9ULM0 1364 aa21.09■□□□□ 0.97
ABCF3-204ENST00000463685 KCNA6P17658 529 aa21.08■□□□□ 0.97
ABCF3-204ENST00000463685 WAPLQ7Z5K2 1190 aa21.08■□□□□ 0.97
ABCF3-204ENST00000463685 PRAM1Q96QH2 718 aa21.08■□□□□ 0.97
ABCF3-204ENST00000463685 EIF3AQ14152 1382 aaKnown RBP21.08■□□□□ 0.96
ABCF3-204ENST00000463685 XRN1Q8IZH2 1706 aaKnown RBP21.07■□□□□ 0.96
ABCF3-204ENST00000463685 CHD2O14647 1828 aaKnown RBP21.07■□□□□ 0.96
ABCF3-204ENST00000463685 KNDC1Q76NI1 1749 aa21.07■□□□□ 0.96
ABCF3-204ENST00000463685 CENPJQ9HC77 1338 aaPredicted RBP21.06■□□□□ 0.96
ABCF3-204ENST00000463685 TECPR2O15040 1411 aa21.06■□□□□ 0.96
ABCF3-204ENST00000463685 DLC1Q96QB1 1528 aa21.06■□□□□ 0.96
ABCF3-204ENST00000463685 POGKQ9P215 609 aa21.06■□□□□ 0.96
ABCF3-204ENST00000463685 CPS1P31327 1500 aa21.05■□□□□ 0.96
ABCF3-204ENST00000463685 TESK2Q96S53 571 aa21.04■□□□□ 0.96
ABCF3-204ENST00000463685 DMRT2Q9Y5R5 561 aa21.04■□□□□ 0.96
ABCF3-204ENST00000463685 STRCP1A6NGW2 1772 aa21.02■□□□□ 0.96
ABCF3-204ENST00000463685 QRICH2Q9H0J4 1663 aa21.02■□□□□ 0.96
ABCF3-204ENST00000463685 NWD1Q149M9 1564 aa21.02■□□□□ 0.96
ABCF3-204ENST00000463685 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.96
ABCF3-204ENST00000463685 RBM33Q96EV2 1170 aaKnown RBP21.02■□□□□ 0.96
ABCF3-204ENST00000463685 MINK1Q8N4C8 1332 aaPredicted RBP21.02■□□□□ 0.95
ABCF3-204ENST00000463685 ZNF335Q9H4Z2 1342 aaPredicted RBP21.02■□□□□ 0.95
ABCF3-204ENST00000463685 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
ABCF3-204ENST00000463685 SIRT1Q96EB6 747 aa21.01■□□□□ 0.95
ABCF3-204ENST00000463685 PTCH1Q13635 1447 aa21.01■□□□□ 0.95
ABCF3-204ENST00000463685 FAM135BQ49AJ0 1406 aa21.01■□□□□ 0.95
ABCF3-204ENST00000463685 DISP3Q9P2K9 1392 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms