RNA–Protein interactions for RNA: ENST00000462852.5

VPS45-205, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-205ENST00000462852 MARVELD3Q96A59 401 aa12.98□□□□□ -0.33
VPS45-205ENST00000462852 ADGBQ8N7X0 1667 aa12.98□□□□□ -0.33
VPS45-205ENST00000462852 PTPRKQ15262 1439 aa12.97□□□□□ -0.33
VPS45-205ENST00000462852 SYCP2Q9BX26 1530 aa12.95□□□□□ -0.34
VPS45-205ENST00000462852 KIF3CO14782 793 aa12.94□□□□□ -0.34
VPS45-205ENST00000462852 PCDH10Q9P2E7 1040 aa12.94□□□□□ -0.34
VPS45-205ENST00000462852 MAST1Q9Y2H9 1570 aa12.94□□□□□ -0.34
VPS45-205ENST00000462852 MBD5Q9P267 1494 aa12.93□□□□□ -0.34
VPS45-205ENST00000462852 SHANK2Q9UPX8 1470 aa12.93□□□□□ -0.34
VPS45-205ENST00000462852 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
VPS45-205ENST00000462852 CFAP74Q9C0B2 1584 aa12.93□□□□□ -0.34
VPS45-205ENST00000462852 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
VPS45-205ENST00000462852 PLCH2O75038 1416 aa12.92□□□□□ -0.34
VPS45-205ENST00000462852 AKNAQ7Z591 1439 aa12.92□□□□□ -0.34
VPS45-205ENST00000462852 ARHGAP5Q13017 1502 aa12.92□□□□□ -0.34
VPS45-205ENST00000462852 INO80Q9ULG1 1556 aaPredicted RBP12.91□□□□□ -0.34
VPS45-205ENST00000462852 DAPK1P53355 1430 aa12.91□□□□□ -0.34
VPS45-205ENST00000462852 C2orf72A6NCS6 295 aa12.91□□□□□ -0.34
VPS45-205ENST00000462852 PCGF6Q9BYE7 350 aa12.91□□□□□ -0.34
VPS45-205ENST00000462852 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
VPS45-205ENST00000462852 ADGRL2O95490 1459 aa12.91□□□□□ -0.34
VPS45-205ENST00000462852 ABCC5O15440 1437 aa12.9□□□□□ -0.34
VPS45-205ENST00000462852 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
VPS45-205ENST00000462852 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
VPS45-205ENST00000462852 PLXNC1O60486 1568 aa12.9□□□□□ -0.35
VPS45-205ENST00000462852 FRMPD1Q5SYB0 1578 aa12.9□□□□□ -0.35
VPS45-205ENST00000462852 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
VPS45-205ENST00000462852 EMP3P54852 163 aa12.89□□□□□ -0.35
VPS45-205ENST00000462852 ZFYVE16Q7Z3T8 1539 aa12.88□□□□□ -0.35
VPS45-205ENST00000462852 HOXB1P14653 301 aaPredicted RBP12.88□□□□□ -0.35
VPS45-205ENST00000462852 NEO1Q92859 1461 aa12.88□□□□□ -0.35
VPS45-205ENST00000462852 KDM5CP41229 1560 aa12.87□□□□□ -0.35
VPS45-205ENST00000462852 RTN4Q9NQC3 1192 aaKnown RBP12.87□□□□□ -0.35
VPS45-205ENST00000462852 RICTORQ6R327 1708 aa12.87□□□□□ -0.35
VPS45-205ENST00000462852 CCDC141Q6ZP82 1450 aa12.86□□□□□ -0.35
VPS45-205ENST00000462852 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
VPS45-205ENST00000462852 HFM1A2PYH4 1435 aa12.86□□□□□ -0.35
VPS45-205ENST00000462852 ZNF644Q9H582 1327 aaPredicted RBP12.86□□□□□ -0.35
VPS45-205ENST00000462852 FANCAO15360 1455 aa12.85□□□□□ -0.35
VPS45-205ENST00000462852 PTPRMP28827 1452 aa12.85□□□□□ -0.35
VPS45-205ENST00000462852 POTEB3A0JP26 581 aa12.85□□□□□ -0.35
VPS45-205ENST00000462852 POTEBQ6S5H4 581 aa12.85□□□□□ -0.35
VPS45-205ENST00000462852 KIAA1107Q9UPP5 1409 aa12.85□□□□□ -0.35
VPS45-205ENST00000462852 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
VPS45-205ENST00000462852 RAPGEF3O95398 923 aa12.84□□□□□ -0.35
VPS45-205ENST00000462852 FBXO41Q8TF61 875 aa12.84□□□□□ -0.35
VPS45-205ENST00000462852 PLEKHH2Q8IVE3 1493 aa12.84□□□□□ -0.35
VPS45-205ENST00000462852 NAIPQ13075 1403 aa12.83□□□□□ -0.36
VPS45-205ENST00000462852 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
VPS45-205ENST00000462852 TMC2Q8TDI7 906 aa12.83□□□□□ -0.36
VPS45-205ENST00000462852 PLSCR2Q9NRY7 297 aa12.83□□□□□ -0.36
VPS45-205ENST00000462852 RYDENQ9NUL5 291 aaKnown RBP12.83□□□□□ -0.36
VPS45-205ENST00000462852 ARID4BQ4LE39 1312 aaPredicted RBP12.83□□□□□ -0.36
VPS45-205ENST00000462852 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.36
VPS45-205ENST00000462852 FAM205CA6NFA0 338 aa12.82□□□□□ -0.36
VPS45-205ENST00000462852 GPR153Q6NV75 609 aa12.82□□□□□ -0.36
VPS45-205ENST00000462852 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
VPS45-205ENST00000462852 KIDINS220Q9ULH0 1771 aa12.81□□□□□ -0.36
VPS45-205ENST00000462852 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
VPS45-205ENST00000462852 ROCK1Q13464 1354 aa12.81□□□□□ -0.36
VPS45-205ENST00000462852 TRAPPC8Q9Y2L5 1435 aa12.8□□□□□ -0.36
VPS45-205ENST00000462852 C9orf84Q5VXU9 1444 aa12.79□□□□□ -0.36
VPS45-205ENST00000462852 ZMYM4Q5VZL5 1548 aa12.79□□□□□ -0.36
VPS45-205ENST00000462852 ABCA6Q8N139 1617 aa12.79□□□□□ -0.36
VPS45-205ENST00000462852 BCORL1Q5H9F3 1711 aa12.79□□□□□ -0.36
VPS45-205ENST00000462852 POGZQ7Z3K3 1410 aa12.79□□□□□ -0.36
VPS45-205ENST00000462852 DENND4BO75064 1496 aaPredicted RBP12.78□□□□□ -0.36
VPS45-205ENST00000462852 ATP7AQ04656 1500 aa12.78□□□□□ -0.36
VPS45-205ENST00000462852 UNC13BO14795 1591 aa12.78□□□□□ -0.36
VPS45-205ENST00000462852 CFDP1Q9UEE9 299 aaPredicted RBP12.78□□□□□ -0.36
VPS45-205ENST00000462852 ARHGEF40Q8TER5 1519 aa12.78□□□□□ -0.36
VPS45-205ENST00000462852 FAM50AQ14320 339 aaKnown RBP12.77□□□□□ -0.37
VPS45-205ENST00000462852 MAGI2Q86UL8 1455 aa12.77□□□□□ -0.37
VPS45-205ENST00000462852 DEPDC5O75140 1603 aa12.77□□□□□ -0.37
VPS45-205ENST00000462852 MADDQ8WXG6 1647 aa12.77□□□□□ -0.37
VPS45-205ENST00000462852 ARSIQ5FYB1 569 aa12.76□□□□□ -0.37
VPS45-205ENST00000462852 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
VPS45-205ENST00000462852 NCOA1Q15788 1441 aa12.76□□□□□ -0.37
VPS45-205ENST00000462852 KDM5DQ9BY66 1539 aa12.76□□□□□ -0.37
VPS45-205ENST00000462852 MROH1Q8NDA8 1641 aa12.75□□□□□ -0.37
VPS45-205ENST00000462852 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.372e-6■■■■□ 23
VPS45-205ENST00000462852 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
VPS45-205ENST00000462852 GPHNQ9NQX3 736 aaPredicted RBP12.75□□□□□ -0.37
VPS45-205ENST00000462852 DIP2CQ9Y2E4 1556 aa12.75□□□□□ -0.37
VPS45-205ENST00000462852 SIGLEC1Q9BZZ2 1709 aa12.74□□□□□ -0.37
VPS45-205ENST00000462852 EIF2AK4Q9P2K8 1649 aaKnown RBP12.74□□□□□ -0.37
VPS45-205ENST00000462852 SETD5Q9C0A6 1442 aa12.74□□□□□ -0.37
VPS45-205ENST00000462852 ZNF518AQ6AHZ1 1483 aa12.73□□□□□ -0.37
VPS45-205ENST00000462852 ERBB3P21860 1342 aa12.72□□□□□ -0.37
VPS45-205ENST00000462852 SLC34A2O95436 690 aa12.72□□□□□ -0.37
VPS45-205ENST00000462852 FOXK1P85037 733 aa12.72□□□□□ -0.37
VPS45-205ENST00000462852 RNF17Q9BXT8 1623 aaKnown RBP12.71□□□□□ -0.37
VPS45-205ENST00000462852 DSG2Q14126 1118 aa12.71□□□□□ -0.37
VPS45-205ENST00000462852 RTEL1-TNFRSF6BF6WH68 1400 aa12.71□□□□□ -0.38
VPS45-205ENST00000462852 SCAPERQ9BY12 1400 aa12.71□□□□□ -0.38
VPS45-205ENST00000462852 RIMS1Q86UR5 1692 aaKnown RBP12.7□□□□□ -0.38
VPS45-205ENST00000462852 DHX57Q6P158 1386 aaKnown RBP12.7□□□□□ -0.38
VPS45-205ENST00000462852 CRISPLD2Q9H0B8 497 aa12.7□□□□□ -0.38
VPS45-205ENST00000462852 DUOX2Q9NRD8 1548 aa12.7□□□□□ -0.38
VPS45-205ENST00000462852 MLH3Q9UHC1 1453 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms