RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 NUTM2AQ8IVF1 878 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-207ENST00000461113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.07■□□□□ 0.64
HDAC4-207ENST00000461113 CDK12Q9NYV4 1490 aaPredicted RBP19.07■□□□□ 0.64
HDAC4-207ENST00000461113 NWD1Q149M9 1564 aa19.06■□□□□ 0.64
HDAC4-207ENST00000461113 MAST1Q9Y2H9 1570 aa19.06■□□□□ 0.64
HDAC4-207ENST00000461113 AFF2P51816 1311 aa19.03■□□□□ 0.64
HDAC4-207ENST00000461113 C14orf37Q86TY3 774 aa19.03■□□□□ 0.64
HDAC4-207ENST00000461113 DUOX2Q9NRD8 1548 aa19.02■□□□□ 0.64
HDAC4-207ENST00000461113 PTPN23Q9H3S7 1636 aa19.01■□□□□ 0.63
HDAC4-207ENST00000461113 KIF15Q9NS87 1388 aa18.99■□□□□ 0.63
HDAC4-207ENST00000461113 NUTM2DQ5VT03 806 aaPredicted RBP18.99■□□□□ 0.63
HDAC4-207ENST00000461113 RRP7BPQ9NSQ0 103 aa18.99■□□□□ 0.63
HDAC4-207ENST00000461113 ATF3P18847 181 aa18.98■□□□□ 0.63
HDAC4-207ENST00000461113 CADPS2Q86UW7 1296 aa18.98■□□□□ 0.63
HDAC4-207ENST00000461113 RGS12O14924 1447 aa18.98■□□□□ 0.63
HDAC4-207ENST00000461113 KANK1Q14678 1352 aa18.97■□□□□ 0.63
HDAC4-207ENST00000461113 AHDC1Q5TGY3 1603 aaPredicted RBP18.97■□□□□ 0.63
HDAC4-207ENST00000461113 QTRT2Q9H974 415 aaKnown RBP18.97■□□□□ 0.63
HDAC4-207ENST00000461113 KDM5AP29375 1690 aaKnown RBP18.97■□□□□ 0.63
HDAC4-207ENST00000461113 NCOA3Q9Y6Q9 1424 aa18.97■□□□□ 0.63
HDAC4-207ENST00000461113 RBM6P78332 1123 aaKnown RBP18.96■□□□□ 0.63
HDAC4-207ENST00000461113 C19orf44Q9H6X5 657 aa18.96■□□□□ 0.63
HDAC4-207ENST00000461113 SHPRHQ149N8 1683 aa18.95■□□□□ 0.62
HDAC4-207ENST00000461113 ERBINQ96RT1 1412 aa18.95■□□□□ 0.62
HDAC4-207ENST00000461113 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
HDAC4-207ENST00000461113 BRINP3Q76B58 766 aa18.95■□□□□ 0.62
HDAC4-207ENST00000461113 PLEKHG1Q9ULL1 1385 aa18.94■□□□□ 0.62
HDAC4-207ENST00000461113 C8orf37Q96NL8 207 aa18.94■□□□□ 0.62
HDAC4-207ENST00000461113 ZRANB1Q9UGI0 708 aa18.94■□□□□ 0.62
HDAC4-207ENST00000461113 ADGRB3O60242 1522 aa18.94■□□□□ 0.62
HDAC4-207ENST00000461113 ABCC5O15440 1437 aa18.93■□□□□ 0.62
HDAC4-207ENST00000461113 DAPK1P53355 1430 aa18.93■□□□□ 0.62
HDAC4-207ENST00000461113 ITGAEP38570 1179 aa18.93■□□□□ 0.62
HDAC4-207ENST00000461113 SLC52A1Q9NWF4 448 aa18.93■□□□□ 0.62
HDAC4-207ENST00000461113 CHIC2Q9UKJ5 165 aa18.93■□□□□ 0.62
HDAC4-207ENST00000461113 TBX22Q9Y458 520 aa18.93■□□□□ 0.62
HDAC4-207ENST00000461113 ANKRD30AQ9BXX3 1397 aa18.92■□□□□ 0.62
HDAC4-207ENST00000461113 NOS1P29475 1434 aa18.91■□□□□ 0.62
HDAC4-207ENST00000461113 DIP2AQ14689 1571 aa18.91■□□□□ 0.62
HDAC4-207ENST00000461113 FOXD1Q16676 465 aa18.9■□□□□ 0.62
HDAC4-207ENST00000461113 ZFYVE9O95405 1425 aa18.9■□□□□ 0.62
HDAC4-207ENST00000461113 RRBP1Q9P2E9 1410 aaKnown RBP18.9■□□□□ 0.62
HDAC4-207ENST00000461113 HDGFP51858 240 aaKnown RBP18.89■□□□□ 0.61
HDAC4-207ENST00000461113 ATAD2Q6PL18 1390 aa18.89■□□□□ 0.61
HDAC4-207ENST00000461113 RIMS2Q9UQ26 1411 aa18.89■□□□□ 0.61
HDAC4-207ENST00000461113 LMTK2Q8IWU2 1503 aa18.89■□□□□ 0.61
HDAC4-207ENST00000461113 CHD2O14647 1828 aaKnown RBP18.88■□□□□ 0.61
HDAC4-207ENST00000461113 NGLY1Q96IV0 654 aa18.87■□□□□ 0.61
HDAC4-207ENST00000461113 SETD5Q9C0A6 1442 aa18.86■□□□□ 0.61
HDAC4-207ENST00000461113 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
HDAC4-207ENST00000461113 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.86■□□□□ 0.61
HDAC4-207ENST00000461113 SETBP1Q9Y6X0 1596 aa18.85■□□□□ 0.61
HDAC4-207ENST00000461113 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.83■□□□□ 0.6
HDAC4-207ENST00000461113 AMOTL2Q9Y2J4 779 aa18.83■□□□□ 0.6
HDAC4-207ENST00000461113 ADAMTS13Q76LX8 1427 aa18.83■□□□□ 0.6
HDAC4-207ENST00000461113 ADAMTS2O95450 1211 aa18.82■□□□□ 0.6
HDAC4-207ENST00000461113 DDX17Q92841 729 aaKnown RBP18.82■□□□□ 0.6
HDAC4-207ENST00000461113 ASXL1Q8IXJ9 1541 aa18.82■□□□□ 0.6
HDAC4-207ENST00000461113 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
HDAC4-207ENST00000461113 CHGAP10645 457 aaKnown RBP18.81■□□□□ 0.6
HDAC4-207ENST00000461113 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
HDAC4-207ENST00000461113 PIK3R4Q99570 1358 aa18.8■□□□□ 0.6
HDAC4-207ENST00000461113 USP21Q9UK80 565 aa18.78■□□□□ 0.6
HDAC4-207ENST00000461113 ADGRL2O95490 1459 aa18.77■□□□□ 0.6
HDAC4-207ENST00000461113 CROCC2H7BZ55 1655 aa18.76■□□□□ 0.59
HDAC4-207ENST00000461113 DCCP43146 1447 aa18.76■□□□□ 0.59
HDAC4-207ENST00000461113 MST1RQ04912 1400 aa18.76■□□□□ 0.59
HDAC4-207ENST00000461113 PTPRUQ92729 1446 aa18.76■□□□□ 0.59
HDAC4-207ENST00000461113 TRPC5Q9UL62 973 aaPredicted RBP18.76■□□□□ 0.59
HDAC4-207ENST00000461113 CCDC125Q86Z20 511 aa18.75■□□□□ 0.59
HDAC4-207ENST00000461113 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
HDAC4-207ENST00000461113 TMEM131LA2VDJ0 1609 aa18.73■□□□□ 0.59
HDAC4-207ENST00000461113 ANKRD50Q9ULJ7 1429 aa18.73■□□□□ 0.59
HDAC4-207ENST00000461113 NHSL1Q5SYE7 1610 aa18.71■□□□□ 0.58
HDAC4-207ENST00000461113 TRPM2O94759 1503 aa18.7■□□□□ 0.58
HDAC4-207ENST00000461113 GCC2Q8IWJ2 1684 aa18.7■□□□□ 0.58
HDAC4-207ENST00000461113 FNBP4Q8N3X1 1017 aaPredicted RBP18.7■□□□□ 0.58
HDAC4-207ENST00000461113 MYO5BQ9ULV0 1848 aa18.69■□□□□ 0.58
HDAC4-207ENST00000461113 ATRNO75882 1429 aa18.68■□□□□ 0.58
HDAC4-207ENST00000461113 EP400Q96L91 3159 aa18.65■□□□□ 0.58
HDAC4-207ENST00000461113 ACIN1Q9UKV3 1341 aaKnown RBP18.64■□□□□ 0.57
HDAC4-207ENST00000461113 PTCH1Q13635 1447 aa18.64■□□□□ 0.57
HDAC4-207ENST00000461113 DEFB132Q7Z7B7 95 aa18.62■□□□□ 0.57
HDAC4-207ENST00000461113 SOS2Q07890 1332 aaPredicted RBP18.62■□□□□ 0.57
HDAC4-207ENST00000461113 HFM1A2PYH4 1435 aa18.62■□□□□ 0.57
HDAC4-207ENST00000461113 ADGRL3Q9HAR2 1447 aa18.62■□□□□ 0.57
HDAC4-207ENST00000461113 C1orf167Q5SNV9 1468 aa18.61■□□□□ 0.57
HDAC4-207ENST00000461113 METP08581 1390 aa18.61■□□□□ 0.57
HDAC4-207ENST00000461113 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
HDAC4-207ENST00000461113 UNC13BO14795 1591 aa18.6■□□□□ 0.57
HDAC4-207ENST00000461113 BLMP54132 1417 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-207ENST00000461113 NAIPQ13075 1403 aa18.6■□□□□ 0.57
HDAC4-207ENST00000461113 GJD4Q96KN9 370 aaPredicted RBP18.6■□□□□ 0.57
HDAC4-207ENST00000461113 XRN1Q8IZH2 1706 aaKnown RBP18.59■□□□□ 0.57
HDAC4-207ENST00000461113 BCL9LQ86UU0 1499 aa18.58■□□□□ 0.57
HDAC4-207ENST00000461113 NUP155O75694 1391 aa18.58■□□□□ 0.57
HDAC4-207ENST00000461113 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
HDAC4-207ENST00000461113 SF3B2Q13435 895 aaKnown RBP18.55■□□□□ 0.56
HDAC4-207ENST00000461113 NRXN3Q9Y4C0 1643 aa18.53■□□□□ 0.56
HDAC4-207ENST00000461113 PSDA5PKW4 1024 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms