RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
NELFCD-201ENST00000460601 MYOM2P54296 1465 aa23.77■■□□□ 1.4
NELFCD-201ENST00000460601 NEXMIFQ5QGS0 1516 aa23.75■■□□□ 1.39
NELFCD-201ENST00000460601 STAG3Q9UJ98 1225 aa23.75■■□□□ 1.39
NELFCD-201ENST00000460601 TNRQ92752 1358 aa23.75■■□□□ 1.39
NELFCD-201ENST00000460601 CFAP70Q5T0N1 1121 aa23.72■■□□□ 1.39
NELFCD-201ENST00000460601 STAC3Q96MF2 364 aa23.72■■□□□ 1.39
NELFCD-201ENST00000460601 NRXN1Q9ULB1 1477 aa23.72■■□□□ 1.39
NELFCD-201ENST00000460601 RIMS1Q86UR5 1692 aaKnown RBP23.71■■□□□ 1.39
NELFCD-201ENST00000460601 GPRASP1Q5JY77 1395 aa23.71■■□□□ 1.39
NELFCD-201ENST00000460601 A2ML1A8K2U0 1454 aa23.71■■□□□ 1.39
NELFCD-201ENST00000460601 C11orf95C9JLR9 678 aaPredicted RBP23.71■■□□□ 1.39
NELFCD-201ENST00000460601 RPGRIP1LQ68CZ1 1315 aa23.7■■□□□ 1.38
NELFCD-201ENST00000460601 PIK3C2GO75747 1445 aa23.69■■□□□ 1.38
NELFCD-201ENST00000460601 ADAMTSL3P82987 1691 aa23.68■■□□□ 1.38
NELFCD-201ENST00000460601 ST20-MTHFSA0A0A6YYL1 179 aa23.68■■□□□ 1.38
NELFCD-201ENST00000460601 WASHC2AQ641Q2 1341 aa23.67■■□□□ 1.38
NELFCD-201ENST00000460601 DDX10Q13206 875 aaKnown RBP23.66■■□□□ 1.38
NELFCD-201ENST00000460601 VGFO15240 615 aaPredicted RBP23.65■■□□□ 1.38
NELFCD-201ENST00000460601 LAMC1P11047 1609 aa23.64■■□□□ 1.37
NELFCD-201ENST00000460601 KIAA1210Q9ULL0 1709 aa23.62■■□□□ 1.37
NELFCD-201ENST00000460601 UBR1Q8IWV7 1749 aa23.62■■□□□ 1.37
NELFCD-201ENST00000460601 TMEM132EQ6IEE7 984 aa23.6■■□□□ 1.37
NELFCD-201ENST00000460601 RIMS2Q9UQ26 1411 aa23.6■■□□□ 1.37
NELFCD-201ENST00000460601 C14orf93Q9H972 538 aaKnown RBP23.6■■□□□ 1.37
NELFCD-201ENST00000460601 NLRP1Q9C000 1473 aa23.59■■□□□ 1.37
NELFCD-201ENST00000460601 IQGAP1P46940 1657 aa23.58■■□□□ 1.37
NELFCD-201ENST00000460601 ZFYVE9O95405 1425 aa23.58■■□□□ 1.37
NELFCD-201ENST00000460601 KIF7Q2M1P5 1343 aa23.58■■□□□ 1.37
NELFCD-201ENST00000460601 MYO3AQ8NEV4 1616 aa23.56■■□□□ 1.36
NELFCD-201ENST00000460601 CCDC7Q96M83 1385 aa23.56■■□□□ 1.36
NELFCD-201ENST00000460601 SCAF11Q99590 1463 aaKnown RBP23.56■■□□□ 1.36
NELFCD-201ENST00000460601 ADGRB1O14514 1584 aa23.56■■□□□ 1.36
NELFCD-201ENST00000460601 TMEM2Q9UHN6 1383 aa23.54■■□□□ 1.36
NELFCD-201ENST00000460601 POLR3GLQ9BT43 218 aa23.54■■□□□ 1.36
NELFCD-201ENST00000460601 TESK2Q96S53 571 aa23.53■■□□□ 1.36
NELFCD-201ENST00000460601 KDM5AP29375 1690 aaKnown RBP23.53■■□□□ 1.36
NELFCD-201ENST00000460601 SETBP1Q9Y6X0 1596 aa23.52■■□□□ 1.36
NELFCD-201ENST00000460601 MIER1Q8N108 512 aa23.52■■□□□ 1.36
NELFCD-201ENST00000460601 ASXL1Q8IXJ9 1541 aa23.51■■□□□ 1.35
NELFCD-201ENST00000460601 POLR1AO95602 1720 aaPredicted RBP23.51■■□□□ 1.35
NELFCD-201ENST00000460601 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
NELFCD-201ENST00000460601 PTPRMP28827 1452 aa23.5■■□□□ 1.35
NELFCD-201ENST00000460601 LTKP29376 864 aa23.49■■□□□ 1.35
NELFCD-201ENST00000460601 ALKQ9UM73 1620 aa23.49■■□□□ 1.35
NELFCD-201ENST00000460601 DISP3Q9P2K9 1392 aa23.48■■□□□ 1.35
NELFCD-201ENST00000460601 CEP170BQ9Y4F5 1589 aaPredicted RBP23.47■■□□□ 1.35
NELFCD-201ENST00000460601 NRXN3Q9Y4C0 1643 aa23.47■■□□□ 1.35
NELFCD-201ENST00000460601 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.45■■□□□ 1.35
NELFCD-201ENST00000460601 STK26Q9P289 416 aa23.45■■□□□ 1.34
NELFCD-201ENST00000460601 EIF3AQ14152 1382 aaKnown RBP23.45■■□□□ 1.34
NELFCD-201ENST00000460601 TXNDC2Q86VQ3 553 aa23.44■■□□□ 1.34
NELFCD-201ENST00000460601 SETD1AO15047 1707 aaKnown RBP23.42■■□□□ 1.34
NELFCD-201ENST00000460601 BCANQ96GW7 911 aa23.42■■□□□ 1.34
NELFCD-201ENST00000460601 THEMISQ8N1K5 641 aaPredicted RBP23.42■■□□□ 1.34
NELFCD-201ENST00000460601 SLIT1O75093 1534 aa23.42■■□□□ 1.34
NELFCD-201ENST00000460601 ARHGAP23Q9P227 1491 aa23.41■■□□□ 1.34
NELFCD-201ENST00000460601 HDGFP51858 240 aaKnown RBP23.4■■□□□ 1.34
NELFCD-201ENST00000460601 METP08581 1390 aa23.4■■□□□ 1.34
NELFCD-201ENST00000460601 ARHGEF28Q8N1W1 1705 aaKnown RBP23.39■■□□□ 1.33
NELFCD-201ENST00000460601 TMF1P82094 1093 aa23.39■■□□□ 1.33
NELFCD-201ENST00000460601 YTHDC2Q9H6S0 1430 aaKnown RBP23.38■■□□□ 1.33
NELFCD-201ENST00000460601 CENPJQ9HC77 1338 aaPredicted RBP23.38■■□□□ 1.33
NELFCD-201ENST00000460601 SAFB2Q14151 953 aaKnown RBP eCLIP23.38■■□□□ 1.33
NELFCD-201ENST00000460601 ZNF142P52746 1687 aaPredicted RBP23.38■■□□□ 1.33
NELFCD-201ENST00000460601 EID1Q9Y6B2 187 aa23.38■■□□□ 1.33
NELFCD-201ENST00000460601 KDM4FA0A1W2PPD8 638 aa23.36■■□□□ 1.33
NELFCD-201ENST00000460601 SETD1BQ9UPS6 1966 aaKnown RBP23.36■■□□□ 1.33
NELFCD-201ENST00000460601 ADAMTS13Q76LX8 1427 aa23.36■■□□□ 1.33
NELFCD-201ENST00000460601 PLEKHG1Q9ULL1 1385 aa23.36■■□□□ 1.33
NELFCD-201ENST00000460601 SLC26A8Q96RN1 970 aa23.35■■□□□ 1.33
NELFCD-201ENST00000460601 QRICH2Q9H0J4 1663 aa23.35■■□□□ 1.33
NELFCD-201ENST00000460601 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
NELFCD-201ENST00000460601 SBNO2Q9Y2G9 1366 aa23.29■■□□□ 1.32
NELFCD-201ENST00000460601 CNGB1Q14028 1251 aaPredicted RBP23.28■■□□□ 1.32
NELFCD-201ENST00000460601 WAPLQ7Z5K2 1190 aa23.28■■□□□ 1.32
NELFCD-201ENST00000460601 LRPPRCP42704 1394 aaKnown RBP23.28■■□□□ 1.32
NELFCD-201ENST00000460601 PLEKHH1Q9ULM0 1364 aa23.28■■□□□ 1.32
NELFCD-201ENST00000460601 MED14O60244 1454 aa23.27■■□□□ 1.32
NELFCD-201ENST00000460601 ANP32CO43423 234 aa23.26■■□□□ 1.31
NELFCD-201ENST00000460601 POGKQ9P215 609 aa23.26■■□□□ 1.31
NELFCD-201ENST00000460601 MINK1Q8N4C8 1332 aaPredicted RBP23.24■■□□□ 1.31
NELFCD-201ENST00000460601 ANKLE2Q86XL3 938 aa23.24■■□□□ 1.31
NELFCD-201ENST00000460601 TULP4Q9NRJ4 1543 aa23.24■■□□□ 1.31
NELFCD-201ENST00000460601 ABCC11Q96J66 1382 aa23.24■■□□□ 1.31
NELFCD-201ENST00000460601 PTPRUQ92729 1446 aa23.23■■□□□ 1.31
NELFCD-201ENST00000460601 MYOM1P52179 1685 aa23.22■■□□□ 1.31
NELFCD-201ENST00000460601 CDCA8Q53HL2 280 aa23.21■■□□□ 1.31
NELFCD-201ENST00000460601 DLC1Q96QB1 1528 aa23.21■■□□□ 1.31
NELFCD-201ENST00000460601 PANK3Q9H999 370 aa23.2■■□□□ 1.3
NELFCD-201ENST00000460601 ROBO2Q9HCK4 1378 aa23.2■■□□□ 1.3
NELFCD-201ENST00000460601 TBX22Q9Y458 520 aa23.19■■□□□ 1.3
NELFCD-201ENST00000460601 NCKAP5LQ9HCH0 1330 aa23.19■■□□□ 1.3
NELFCD-201ENST00000460601 CABP2Q9NPB3 220 aa23.18■■□□□ 1.3
NELFCD-201ENST00000460601 TECPR2O15040 1411 aa23.18■■□□□ 1.3
NELFCD-201ENST00000460601 KNDC1Q76NI1 1749 aa23.18■■□□□ 1.3
NELFCD-201ENST00000460601 HSPA2P54652 639 aa23.17■■□□□ 1.3
NELFCD-201ENST00000460601 CPS1P31327 1500 aa23.17■■□□□ 1.3
NELFCD-201ENST00000460601 EVC2Q86UK5 1308 aa23.17■■□□□ 1.3
NELFCD-201ENST00000460601 SLC24A1O60721 1099 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms