RNA–Protein interactions for RNA: ENST00000460352.1

MMP11-205, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-205ENST00000460352 PPP1R15AO75807 674 aaPredicted RBP24.18■■□□□ 1.46
MMP11-205ENST00000460352 UBR1Q8IWV7 1749 aa24.17■■□□□ 1.46
MMP11-205ENST00000460352 ZNF142P52746 1687 aaPredicted RBP24.16■■□□□ 1.46
MMP11-205ENST00000460352 MYO5BQ9ULV0 1848 aa24.14■■□□□ 1.45
MMP11-205ENST00000460352 TMEM2Q9UHN6 1383 aa24.14■■□□□ 1.45
MMP11-205ENST00000460352 RIMS2Q9UQ26 1411 aa24.12■■□□□ 1.45
MMP11-205ENST00000460352 ANKLE2Q86XL3 938 aa24.12■■□□□ 1.45
MMP11-205ENST00000460352 ZFYVE9O95405 1425 aa24.11■■□□□ 1.45
MMP11-205ENST00000460352 TXNDC2Q86VQ3 553 aa24.1■■□□□ 1.45
MMP11-205ENST00000460352 MYOM2P54296 1465 aa24.1■■□□□ 1.45
MMP11-205ENST00000460352 PPLO60437 1756 aa24.1■■□□□ 1.45
MMP11-205ENST00000460352 BCANQ96GW7 911 aa24.09■■□□□ 1.45
MMP11-205ENST00000460352 SLIT1O75093 1534 aa24.07■■□□□ 1.44
MMP11-205ENST00000460352 NEXMIFQ5QGS0 1516 aa24.07■■□□□ 1.44
MMP11-205ENST00000460352 AEBP2Q6ZN18 517 aaPredicted RBP24.07■■□□□ 1.44
MMP11-205ENST00000460352 IFT172Q9UG01 1749 aa24.07■■□□□ 1.44
MMP11-205ENST00000460352 ARHGAP23Q9P227 1491 aa24.04■■□□□ 1.44
MMP11-205ENST00000460352 NUTM2DQ5VT03 806 aaPredicted RBP24.02■■□□□ 1.44
MMP11-205ENST00000460352 PRAG1Q86YV5 1406 aa24.01■■□□□ 1.43
MMP11-205ENST00000460352 SCAF11Q99590 1463 aaKnown RBP24.01■■□□□ 1.43
MMP11-205ENST00000460352 ADGRF5Q8IZF2 1346 aa24.01■■□□□ 1.43
MMP11-205ENST00000460352 PLEKHG1Q9ULL1 1385 aa23.98■■□□□ 1.43
MMP11-205ENST00000460352 NRXN1Q9ULB1 1477 aa23.98■■□□□ 1.43
MMP11-205ENST00000460352 LTKP29376 864 aa23.97■■□□□ 1.43
MMP11-205ENST00000460352 C14orf93Q9H972 538 aaKnown RBP23.97■■□□□ 1.43
MMP11-205ENST00000460352 LAMC1P11047 1609 aa23.96■■□□□ 1.43
MMP11-205ENST00000460352 LMTK3Q96Q04 1460 aa23.96■■□□□ 1.43
MMP11-205ENST00000460352 PIK3C2GO75747 1445 aa23.96■■□□□ 1.43
MMP11-205ENST00000460352 KIAA1210Q9ULL0 1709 aa23.96■■□□□ 1.43
MMP11-205ENST00000460352 NBPF8Q3BBV2 869 aa23.95■■□□□ 1.42
MMP11-205ENST00000460352 ROCK2O75116 1388 aaKnown RBP23.94■■□□□ 1.42
MMP11-205ENST00000460352 DMRT2Q9Y5R5 561 aa23.94■■□□□ 1.42
MMP11-205ENST00000460352 POLR1AO95602 1720 aaPredicted RBP23.93■■□□□ 1.42
MMP11-205ENST00000460352 CFAP70Q5T0N1 1121 aa23.91■■□□□ 1.42
MMP11-205ENST00000460352 CARD11Q9BXL7 1154 aa23.91■■□□□ 1.42
MMP11-205ENST00000460352 TBX22Q9Y458 520 aa23.91■■□□□ 1.42
MMP11-205ENST00000460352 RALGAPBQ86X10 1494 aa23.9■■□□□ 1.42
MMP11-205ENST00000460352 HSPA2P54652 639 aa23.9■■□□□ 1.42
MMP11-205ENST00000460352 SETBP1Q9Y6X0 1596 aa23.9■■□□□ 1.42
MMP11-205ENST00000460352 TRPM1Q7Z4N2 1603 aa23.89■■□□□ 1.42
MMP11-205ENST00000460352 MED14O60244 1454 aa23.88■■□□□ 1.41
MMP11-205ENST00000460352 NCKAP5LQ9HCH0 1330 aa23.88■■□□□ 1.41
MMP11-205ENST00000460352 NPHP4O75161 1426 aaPredicted RBP23.88■■□□□ 1.41
MMP11-205ENST00000460352 DIP2AQ14689 1571 aa23.87■■□□□ 1.41
MMP11-205ENST00000460352 ALKQ9UM73 1620 aa23.86■■□□□ 1.41
MMP11-205ENST00000460352 SLC24A1O60721 1099 aa23.85■■□□□ 1.41
MMP11-205ENST00000460352 EIF4G2P78344 907 aaKnown RBP eCLIP23.85■■□□□ 1.41
MMP11-205ENST00000460352 IQGAP1P46940 1657 aa23.84■■□□□ 1.41
MMP11-205ENST00000460352 EIF3AQ14152 1382 aaKnown RBP23.84■■□□□ 1.41
MMP11-205ENST00000460352 SLC26A8Q96RN1 970 aa23.84■■□□□ 1.41
MMP11-205ENST00000460352 GPRASP1Q5JY77 1395 aa23.83■■□□□ 1.41
MMP11-205ENST00000460352 PIK3R4Q99570 1358 aa23.83■■□□□ 1.41
MMP11-205ENST00000460352 NBPF1Q3BBV0 1214 aa23.83■■□□□ 1.41
MMP11-205ENST00000460352 SENP3Q9H4L4 574 aaPredicted RBP23.83■■□□□ 1.41
MMP11-205ENST00000460352 ADAMTS13Q76LX8 1427 aa23.79■■□□□ 1.4
MMP11-205ENST00000460352 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
MMP11-205ENST00000460352 NRXN3Q9Y4C0 1643 aa23.77■■□□□ 1.4
MMP11-205ENST00000460352 STK26Q9P289 416 aa23.76■■□□□ 1.39
MMP11-205ENST00000460352 YTHDC2Q9H6S0 1430 aaKnown RBP23.76■■□□□ 1.39
MMP11-205ENST00000460352 SIRT1Q96EB6 747 aa23.75■■□□□ 1.39
MMP11-205ENST00000460352 LRPPRCP42704 1394 aaKnown RBP23.75■■□□□ 1.39
MMP11-205ENST00000460352 USP47Q96K76 1375 aa23.75■■□□□ 1.39
MMP11-205ENST00000460352 STRCQ7RTU9 1775 aa23.74■■□□□ 1.39
MMP11-205ENST00000460352 TRAK1Q9UPV9 953 aa23.74■■□□□ 1.39
MMP11-205ENST00000460352 ABCC11Q96J66 1382 aa23.74■■□□□ 1.39
MMP11-205ENST00000460352 POGKQ9P215 609 aa23.73■■□□□ 1.39
MMP11-205ENST00000460352 METP08581 1390 aa23.73■■□□□ 1.39
MMP11-205ENST00000460352 ADGRB1O14514 1584 aa23.73■■□□□ 1.39
MMP11-205ENST00000460352 AMOTL2Q9Y2J4 779 aa23.72■■□□□ 1.39
MMP11-205ENST00000460352 SETD1AO15047 1707 aaKnown RBP23.71■■□□□ 1.39
MMP11-205ENST00000460352 KCNA6P17658 529 aa23.71■■□□□ 1.39
MMP11-205ENST00000460352 CENPJQ9HC77 1338 aaPredicted RBP23.68■■□□□ 1.38
MMP11-205ENST00000460352 HSPA5P11021 654 aaKnown RBP23.68■■□□□ 1.38
MMP11-205ENST00000460352 DLC1Q96QB1 1528 aa23.67■■□□□ 1.38
MMP11-205ENST00000460352 CHD2O14647 1828 aaKnown RBP23.66■■□□□ 1.38
MMP11-205ENST00000460352 ST20-MTHFSA0A0A6YYL1 179 aa23.66■■□□□ 1.38
MMP11-205ENST00000460352 TECPR2O15040 1411 aa23.66■■□□□ 1.38
MMP11-205ENST00000460352 FAM135BQ49AJ0 1406 aa23.66■■□□□ 1.38
MMP11-205ENST00000460352 CDCA8Q53HL2 280 aa23.65■■□□□ 1.38
MMP11-205ENST00000460352 KNDC1Q76NI1 1749 aa23.64■■□□□ 1.38
MMP11-205ENST00000460352 PRAM1Q96QH2 718 aa23.64■■□□□ 1.37
MMP11-205ENST00000460352 ASXL1Q8IXJ9 1541 aa23.64■■□□□ 1.37
MMP11-205ENST00000460352 TMF1P82094 1093 aa23.62■■□□□ 1.37
MMP11-205ENST00000460352 PTCH1Q13635 1447 aa23.61■■□□□ 1.37
MMP11-205ENST00000460352 PROSER2Q86WR7 435 aaPredicted RBP23.6■■□□□ 1.37
MMP11-205ENST00000460352 CPS1P31327 1500 aa23.59■■□□□ 1.37
MMP11-205ENST00000460352 ARHGEF28Q8N1W1 1705 aaKnown RBP23.59■■□□□ 1.37
MMP11-205ENST00000460352 ZNF316A6NFI3 1004 aaPredicted RBP23.59■■□□□ 1.37
MMP11-205ENST00000460352 NKTRP30414 1462 aaKnown RBP23.59■■□□□ 1.37
MMP11-205ENST00000460352 PTPRUQ92729 1446 aa23.59■■□□□ 1.37
MMP11-205ENST00000460352 SBNO2Q9Y2G9 1366 aa23.58■■□□□ 1.37
MMP11-205ENST00000460352 XRN1Q8IZH2 1706 aaKnown RBP23.58■■□□□ 1.37
MMP11-205ENST00000460352 C14orf37Q86TY3 774 aa23.57■■□□□ 1.36
MMP11-205ENST00000460352 EVC2Q86UK5 1308 aa23.57■■□□□ 1.36
MMP11-205ENST00000460352 NWD1Q149M9 1564 aa23.57■■□□□ 1.36
MMP11-205ENST00000460352 WAPLQ7Z5K2 1190 aa23.56■■□□□ 1.36
MMP11-205ENST00000460352 SAFB2Q14151 953 aaKnown RBP eCLIP23.55■■□□□ 1.36
MMP11-205ENST00000460352 ROBO2Q9HCK4 1378 aa23.54■■□□□ 1.36
MMP11-205ENST00000460352 NCOA3Q9Y6Q9 1424 aa23.54■■□□□ 1.36
MMP11-205ENST00000460352 HIRIP3Q9BW71 556 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms