RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 TNRQ92752 1358 aa12.51□□□□□ -0.41
UFD1-205ENST00000459854 PLXNC1O60486 1568 aa12.5□□□□□ -0.41
UFD1-205ENST00000459854 FBXO31Q5XUX0 539 aaPredicted RBP12.49□□□□□ -0.41
UFD1-205ENST00000459854 KDM5CP41229 1560 aa12.48□□□□□ -0.41
UFD1-205ENST00000459854 ZMYM4Q5VZL5 1548 aa12.48□□□□□ -0.41
UFD1-205ENST00000459854 ANKLE2Q86XL3 938 aa12.48□□□□□ -0.41
UFD1-205ENST00000459854 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
UFD1-205ENST00000459854 ARHGEF40Q8TER5 1519 aa12.47□□□□□ -0.41
UFD1-205ENST00000459854 POGKQ9P215 609 aa12.47□□□□□ -0.41
UFD1-205ENST00000459854 RPGRIP1LQ68CZ1 1315 aa12.47□□□□□ -0.41
UFD1-205ENST00000459854 COL17A1Q9UMD9 1497 aaPredicted RBP12.47□□□□□ -0.41
UFD1-205ENST00000459854 TCERG1O14776 1098 aaKnown RBP12.47□□□□□ -0.41
UFD1-205ENST00000459854 TXNDC2Q86VQ3 553 aa12.47□□□□□ -0.41
UFD1-205ENST00000459854 KIF13AQ9H1H9 1805 aa12.47□□□□□ -0.41
UFD1-205ENST00000459854 CARD11Q9BXL7 1154 aa12.47□□□□□ -0.41
UFD1-205ENST00000459854 FAM135AQ9P2D6 1515 aa12.46□□□□□ -0.41
UFD1-205ENST00000459854 HSP90AA2PQ14568 343 aaPredicted RBP12.46□□□□□ -0.41
UFD1-205ENST00000459854 HSCBQ8IWL3 235 aa12.46□□□□□ -0.41
UFD1-205ENST00000459854 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
UFD1-205ENST00000459854 NUTM2DQ5VT03 806 aaPredicted RBP12.45□□□□□ -0.42
UFD1-205ENST00000459854 TNNT3P45378 269 aaPredicted RBP12.45□□□□□ -0.42
UFD1-205ENST00000459854 L3MBTL2Q969R5 705 aa12.45□□□□□ -0.42
UFD1-205ENST00000459854 INO80Q9ULG1 1556 aaPredicted RBP12.45□□□□□ -0.42
UFD1-205ENST00000459854 HSP90AB1P08238 724 aaKnown RBP12.44□□□□□ -0.42
UFD1-205ENST00000459854 KIAA2012Q0VF49 1180 aa12.44□□□□□ -0.42
UFD1-205ENST00000459854 GBP4Q96PP9 640 aa12.44□□□□□ -0.42
UFD1-205ENST00000459854 KDM5DQ9BY66 1539 aa12.44□□□□□ -0.42
UFD1-205ENST00000459854 DIP2CQ9Y2E4 1556 aa12.44□□□□□ -0.42
UFD1-205ENST00000459854 AGLP35573 1532 aa12.44□□□□□ -0.42
UFD1-205ENST00000459854 IDI1Q13907 227 aa12.44□□□□□ -0.42
UFD1-205ENST00000459854 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
UFD1-205ENST00000459854 IPO9Q96P70 1041 aaKnown RBP12.44□□□□□ -0.42
UFD1-205ENST00000459854 SALL2Q9Y467 1007 aaPredicted RBP12.44□□□□□ -0.42
UFD1-205ENST00000459854 DMRT2Q9Y5R5 561 aa12.43□□□□□ -0.42
UFD1-205ENST00000459854 CROCC2H7BZ55 1655 aa12.42□□□□□ -0.42
UFD1-205ENST00000459854 GCC2Q8IWJ2 1684 aa12.42□□□□□ -0.42
UFD1-205ENST00000459854 UHRF1BP1Q6BDS2 1440 aa12.42□□□□□ -0.42
UFD1-205ENST00000459854 ANKRD30BQ9BXX2 1392 aa12.42□□□□□ -0.42
UFD1-205ENST00000459854 RPRD2Q5VT52 1461 aaKnown RBP12.41□□□□□ -0.42
UFD1-205ENST00000459854 EIF2AK4Q9P2K8 1649 aaKnown RBP12.4□□□□□ -0.42
UFD1-205ENST00000459854 GOLGA6L3A6NEY3 463 aa12.4□□□□□ -0.42
UFD1-205ENST00000459854 STK26Q9P289 416 aa12.4□□□□□ -0.42
UFD1-205ENST00000459854 ROCK2O75116 1388 aaKnown RBP12.4□□□□□ -0.42
UFD1-205ENST00000459854 ABCA6Q8N139 1617 aa12.39□□□□□ -0.43
UFD1-205ENST00000459854 EIF3AQ14152 1382 aaKnown RBP12.39□□□□□ -0.43
UFD1-205ENST00000459854 KIDINS220Q9ULH0 1771 aa12.39□□□□□ -0.43
UFD1-205ENST00000459854 RICTORQ6R327 1708 aa12.39□□□□□ -0.43
UFD1-205ENST00000459854 FANCIQ9NVI1 1328 aa12.38□□□□□ -0.43
UFD1-205ENST00000459854 SYAP1Q96A49 352 aaPredicted RBP12.37□□□□□ -0.43
UFD1-205ENST00000459854 CFAP53Q96M91 514 aa12.37□□□□□ -0.43
UFD1-205ENST00000459854 NPATQ14207 1427 aa12.36□□□□□ -0.43
UFD1-205ENST00000459854 FTSJ3Q8IY81 847 aaKnown RBP12.36□□□□□ -0.43
UFD1-205ENST00000459854 PZPP20742 1482 aa12.36□□□□□ -0.43
UFD1-205ENST00000459854 ABCC3O15438 1527 aa12.36□□□□□ -0.43
UFD1-205ENST00000459854 ARHGAP31Q2M1Z3 1444 aa12.35□□□□□ -0.43
UFD1-205ENST00000459854 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
UFD1-205ENST00000459854 REREQ9P2R6 1566 aa12.34□□□□□ -0.43
UFD1-205ENST00000459854 PPRC1Q5VV67 1664 aaKnown RBP12.34□□□□□ -0.43
UFD1-205ENST00000459854 FRMPD1Q5SYB0 1578 aa12.32□□□□□ -0.44
UFD1-205ENST00000459854 NLRP1Q9C000 1473 aa12.32□□□□□ -0.44
UFD1-205ENST00000459854 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
UFD1-205ENST00000459854 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
UFD1-205ENST00000459854 PRDM15P57071 1507 aaPredicted RBP12.32□□□□□ -0.44
UFD1-205ENST00000459854 TMF1P82094 1093 aa12.32□□□□□ -0.44
UFD1-205ENST00000459854 MCCP23508 829 aa12.32□□□□□ -0.44
UFD1-205ENST00000459854 TRAK1Q9UPV9 953 aa12.31□□□□□ -0.44
UFD1-205ENST00000459854 ERVK-7P63135 1459 aa12.31□□□□□ -0.44
UFD1-205ENST00000459854 SAFB2Q14151 953 aaKnown RBP eCLIP12.31□□□□□ -0.44
UFD1-205ENST00000459854 UNC13BO14795 1591 aa12.31□□□□□ -0.44
UFD1-205ENST00000459854 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
UFD1-205ENST00000459854 RIMS2Q9UQ26 1411 aa12.31□□□□□ -0.44
UFD1-205ENST00000459854 GOLGA6L4A6NEF3 574 aa12.31□□□□□ -0.44
UFD1-205ENST00000459854 RGS3P49796 1198 aa12.31□□□□□ -0.44
UFD1-205ENST00000459854 PLCB2Q00722 1185 aa12.31□□□□□ -0.44
UFD1-205ENST00000459854 MAP7D2Q96T17 732 aa12.3□□□□□ -0.44
UFD1-205ENST00000459854 TET3O43151 1660 aa12.3□□□□□ -0.44
UFD1-205ENST00000459854 SLC26A8Q96RN1 970 aa12.3□□□□□ -0.44
UFD1-205ENST00000459854 SRPK2P78362 688 aaKnown RBP12.3□□□□□ -0.44
UFD1-205ENST00000459854 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
UFD1-205ENST00000459854 EFCAB6Q5THR3 1501 aa12.3□□□□□ -0.44
UFD1-205ENST00000459854 IQGAP3Q86VI3 1631 aa12.29□□□□□ -0.44
UFD1-205ENST00000459854 HSPA2P54652 639 aa12.29□□□□□ -0.44
UFD1-205ENST00000459854 GSE1Q14687 1217 aa12.29□□□□□ -0.44
UFD1-205ENST00000459854 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
UFD1-205ENST00000459854 PROSER2Q86WR7 435 aaPredicted RBP12.29□□□□□ -0.44
UFD1-205ENST00000459854 DDX11L8A8MPP1 907 aa12.28□□□□□ -0.44
UFD1-205ENST00000459854 KNSTRNQ9Y448 316 aa12.28□□□□□ -0.44
UFD1-205ENST00000459854 SETQ01105 290 aaPredicted RBP12.28□□□□□ -0.44
UFD1-205ENST00000459854 HTATSF1O43719 755 aaKnown RBP12.28□□□□□ -0.44
UFD1-205ENST00000459854 GOLGA6L1Q8N7Z2 621 aa12.28□□□□□ -0.44
UFD1-205ENST00000459854 NOS1P29475 1434 aa12.28□□□□□ -0.44
UFD1-205ENST00000459854 ZC3H13Q5T200 1668 aaKnown RBP12.27□□□□□ -0.44
UFD1-205ENST00000459854 PTPRMP28827 1452 aa12.27□□□□□ -0.44
UFD1-205ENST00000459854 SKOR2Q2VWA4 1001 aaPredicted RBP12.27□□□□□ -0.45
UFD1-205ENST00000459854 DRC7Q8IY82 874 aa12.27□□□□□ -0.45
UFD1-205ENST00000459854 RNF17Q9BXT8 1623 aaKnown RBP12.27□□□□□ -0.45
UFD1-205ENST00000459854 TMEM2Q9UHN6 1383 aa12.26□□□□□ -0.45
UFD1-205ENST00000459854 PHF14O94880 888 aa12.26□□□□□ -0.45
UFD1-205ENST00000459854 ATF3P18847 181 aa12.25□□□□□ -0.45
UFD1-205ENST00000459854 CSPP1Q1MSJ5 1256 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms