RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CHGAP10645 457 aaKnown RBP34.4■■■■□ 3.1
U2AF1-204ENST00000459639 IDI1Q13907 227 aa34.39■■■■□ 3.1
U2AF1-204ENST00000459639 NEXMIFQ5QGS0 1516 aa34.36■■■■□ 3.09
U2AF1-204ENST00000459639 NBPF1Q3BBV0 1214 aa34.3■■■■□ 3.08
U2AF1-204ENST00000459639 C3P01024 1663 aa34.3■■■■□ 3.08
U2AF1-204ENST00000459639 IQGAP1P46940 1657 aa34.29■■■■□ 3.08
U2AF1-204ENST00000459639 ADGRF5Q8IZF2 1346 aa34.28■■■■□ 3.08
U2AF1-204ENST00000459639 PIK3C2GO75747 1445 aa34.26■■■■□ 3.07
U2AF1-204ENST00000459639 KDM5AP29375 1690 aaKnown RBP34.25■■■■□ 3.07
U2AF1-204ENST00000459639 ZFYVE9O95405 1425 aa34.24■■■■□ 3.07
U2AF1-204ENST00000459639 TNRQ92752 1358 aa34.23■■■■□ 3.07
U2AF1-204ENST00000459639 SETBP1Q9Y6X0 1596 aa34.22■■■■□ 3.07
U2AF1-204ENST00000459639 WASHC2AQ641Q2 1341 aa34.21■■■■□ 3.07
U2AF1-204ENST00000459639 A2ML1A8K2U0 1454 aa34.21■■■■□ 3.07
U2AF1-204ENST00000459639 CCDC7Q96M83 1385 aa34.2■■■■□ 3.07
U2AF1-204ENST00000459639 VGFO15240 615 aaPredicted RBP34.19■■■■□ 3.06
U2AF1-204ENST00000459639 DDX10Q13206 875 aaKnown RBP34.19■■■■□ 3.06
U2AF1-204ENST00000459639 SCAF11Q99590 1463 aaKnown RBP34.17■■■■□ 3.06
U2AF1-204ENST00000459639 ADAMTSL3P82987 1691 aa34.16■■■■□ 3.06
U2AF1-204ENST00000459639 STAG3Q9UJ98 1225 aa34.15■■■■□ 3.06
U2AF1-204ENST00000459639 ST20-MTHFSA0A0A6YYL1 179 aa34.15■■■■□ 3.06
U2AF1-204ENST00000459639 NLRP1Q9C000 1473 aa34.14■■■■□ 3.06
U2AF1-204ENST00000459639 UBR1Q8IWV7 1749 aa34.13■■■■□ 3.05
U2AF1-204ENST00000459639 RIMS1Q86UR5 1692 aaKnown RBP34.13■■■■□ 3.05
U2AF1-204ENST00000459639 C11orf95C9JLR9 678 aaPredicted RBP34.13■■■■□ 3.05
U2AF1-204ENST00000459639 CFAP70Q5T0N1 1121 aa34.13■■■■□ 3.05
U2AF1-204ENST00000459639 KIF7Q2M1P5 1343 aa34.11■■■■□ 3.05
U2AF1-204ENST00000459639 C14orf93Q9H972 538 aaKnown RBP34.1■■■■□ 3.05
U2AF1-204ENST00000459639 ADGRB1O14514 1584 aa34.09■■■■□ 3.05
U2AF1-204ENST00000459639 EIF3AQ14152 1382 aaKnown RBP34.07■■■■□ 3.04
U2AF1-204ENST00000459639 RIMS2Q9UQ26 1411 aa34.06■■■■□ 3.04
U2AF1-204ENST00000459639 MIER1Q8N108 512 aa34.06■■■■□ 3.04
U2AF1-204ENST00000459639 CEBPAP49715 358 aaPredicted RBP34.05■■■■□ 3.04
U2AF1-204ENST00000459639 MYO3AQ8NEV4 1616 aa34.04■■■■□ 3.04
U2AF1-204ENST00000459639 NUTM2DQ5VT03 806 aaPredicted RBP34.03■■■■□ 3.04
U2AF1-204ENST00000459639 TESK2Q96S53 571 aa33.99■■■■□ 3.03
U2AF1-204ENST00000459639 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.96■■■■□ 3.03
U2AF1-204ENST00000459639 ALKQ9UM73 1620 aa33.95■■■■□ 3.02
U2AF1-204ENST00000459639 ASXL1Q8IXJ9 1541 aa33.95■■■■□ 3.02
U2AF1-204ENST00000459639 TMEM2Q9UHN6 1383 aa33.93■■■■□ 3.02
U2AF1-204ENST00000459639 SETD1AO15047 1707 aaKnown RBP33.92■■■■□ 3.02
U2AF1-204ENST00000459639 HDGFP51858 240 aaKnown RBP33.91■■■■□ 3.02
U2AF1-204ENST00000459639 ARHGEF28Q8N1W1 1705 aaKnown RBP33.91■■■■□ 3.02
U2AF1-204ENST00000459639 NRXN3Q9Y4C0 1643 aa33.9■■■■□ 3.02
U2AF1-204ENST00000459639 TMF1P82094 1093 aa33.9■■■■□ 3.02
U2AF1-204ENST00000459639 DISP3Q9P2K9 1392 aa33.89■■■■□ 3.02
U2AF1-204ENST00000459639 QRICH2Q9H0J4 1663 aa33.87■■■■□ 3.01
U2AF1-204ENST00000459639 SLIT1O75093 1534 aa33.87■■■■□ 3.01
U2AF1-204ENST00000459639 SBNO2Q9Y2G9 1366 aa33.87■■■■□ 3.01
U2AF1-204ENST00000459639 ZNF142P52746 1687 aaPredicted RBP33.86■■■■□ 3.01
U2AF1-204ENST00000459639 CEP170BQ9Y4F5 1589 aaPredicted RBP33.86■■■■□ 3.01
U2AF1-204ENST00000459639 TMEM132EQ6IEE7 984 aa33.86■■■■□ 3.01
U2AF1-204ENST00000459639 PLPPR3Q6T4P5 718 aa33.86■■■■□ 3.01
U2AF1-204ENST00000459639 SLC24A1O60721 1099 aa33.85■■■■□ 3.01
U2AF1-204ENST00000459639 ARHGAP23Q9P227 1491 aa33.85■■■■□ 3.01
U2AF1-204ENST00000459639 POLR3GLQ9BT43 218 aa33.84■■■■□ 3.01
U2AF1-204ENST00000459639 PTPRMP28827 1452 aa33.82■■■■□ 3
U2AF1-204ENST00000459639 ANP32CO43423 234 aa33.82■■■■□ 3
U2AF1-204ENST00000459639 SETD1BQ9UPS6 1966 aaKnown RBP33.81■■■■□ 3
U2AF1-204ENST00000459639 CENPJQ9HC77 1338 aaPredicted RBP33.8■■■■□ 3
U2AF1-204ENST00000459639 TRAK1Q9UPV9 953 aa33.8■■■■□ 3
U2AF1-204ENST00000459639 YTHDC2Q9H6S0 1430 aaKnown RBP33.78■■■■□ 3
U2AF1-204ENST00000459639 CDCA8Q53HL2 280 aa33.77■■■■□ 3
U2AF1-204ENST00000459639 PLEKHG1Q9ULL1 1385 aa33.75■■■□□ 2.99
U2AF1-204ENST00000459639 THEMISQ8N1K5 641 aaPredicted RBP33.75■■■□□ 2.99
U2AF1-204ENST00000459639 DLC1Q96QB1 1528 aa33.72■■■□□ 2.99
U2AF1-204ENST00000459639 SENP3Q9H4L4 574 aaPredicted RBP33.71■■■□□ 2.99
U2AF1-204ENST00000459639 KNDC1Q76NI1 1749 aa33.71■■■□□ 2.99
U2AF1-204ENST00000459639 EID1Q9Y6B2 187 aa33.71■■■□□ 2.99
U2AF1-204ENST00000459639 MYOM1P52179 1685 aa33.7■■■□□ 2.99
U2AF1-204ENST00000459639 LRPPRCP42704 1394 aaKnown RBP33.69■■■□□ 2.98
U2AF1-204ENST00000459639 LTKP29376 864 aa33.68■■■□□ 2.98
U2AF1-204ENST00000459639 TXNDC2Q86VQ3 553 aa33.68■■■□□ 2.98
U2AF1-204ENST00000459639 ADAMTS13Q76LX8 1427 aa33.67■■■□□ 2.98
U2AF1-204ENST00000459639 STK26Q9P289 416 aa33.64■■■□□ 2.98
U2AF1-204ENST00000459639 DIP2AQ14689 1571 aa33.63■■■□□ 2.97
U2AF1-204ENST00000459639 CCER2I3L3R5 266 aa33.63■■■□□ 2.97
U2AF1-204ENST00000459639 MED14O60244 1454 aa33.63■■■□□ 2.97
U2AF1-204ENST00000459639 ABCC11Q96J66 1382 aa33.63■■■□□ 2.97
U2AF1-204ENST00000459639 METP08581 1390 aa33.62■■■□□ 2.97
U2AF1-204ENST00000459639 TECPR2O15040 1411 aa33.6■■■□□ 2.97
U2AF1-204ENST00000459639 TULP4Q9NRJ4 1543 aa33.6■■■□□ 2.97
U2AF1-204ENST00000459639 BCANQ96GW7 911 aa33.59■■■□□ 2.97
U2AF1-204ENST00000459639 CPS1P31327 1500 aa33.59■■■□□ 2.97
U2AF1-204ENST00000459639 PRKRIP1Q9H875 184 aaPredicted RBP33.57■■■□□ 2.96
U2AF1-204ENST00000459639 PRAM1Q96QH2 718 aa33.55■■■□□ 2.96
U2AF1-204ENST00000459639 PUS7Q96PZ0 661 aaKnown RBP33.54■■■□□ 2.96
U2AF1-204ENST00000459639 EVC2Q86UK5 1308 aa33.53■■■□□ 2.96
U2AF1-204ENST00000459639 POGKQ9P215 609 aa33.53■■■□□ 2.96
U2AF1-204ENST00000459639 FAM135BQ49AJ0 1406 aa33.52■■■□□ 2.96
U2AF1-204ENST00000459639 SIRT1Q96EB6 747 aa33.5■■■□□ 2.95
U2AF1-204ENST00000459639 PANK3Q9H999 370 aa33.5■■■□□ 2.95
U2AF1-204ENST00000459639 PER1O15534 1290 aaPredicted RBP33.48■■■□□ 2.95
U2AF1-204ENST00000459639 TBX22Q9Y458 520 aa33.48■■■□□ 2.95
U2AF1-204ENST00000459639 KTN1Q86UP2 1357 aaKnown RBP33.48■■■□□ 2.95
U2AF1-204ENST00000459639 SAFB2Q14151 953 aaKnown RBP eCLIP33.47■■■□□ 2.95
U2AF1-204ENST00000459639 ANKLE2Q86XL3 938 aa33.45■■■□□ 2.95
U2AF1-204ENST00000459639 SLC26A8Q96RN1 970 aa33.43■■■□□ 2.94
U2AF1-204ENST00000459639 PLEKHH1Q9ULM0 1364 aa33.43■■■□□ 2.94
U2AF1-204ENST00000459639 MINK1Q8N4C8 1332 aaPredicted RBP33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms