RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 HCSTQ9UBK5 93 aa8.88□□□□□ -0.99
SNORD42A-201ENST00000459584 HPS5Q9UPZ3 1129 aa8.88□□□□□ -0.99
SNORD42A-201ENST00000459584 WBP1LQ9NX94 342 aa8.87□□□□□ -0.99
SNORD42A-201ENST00000459584 TMEM134Q9H6X4 195 aa8.86□□□□□ -0.99
SNORD42A-201ENST00000459584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.85□□□□□ -0.99
SNORD42A-201ENST00000459584 TSR3Q9UJK0 312 aaKnown RBP8.85□□□□□ -0.99
SNORD42A-201ENST00000459584 PPP4CP60510 307 aa8.84□□□□□ -0.99
SNORD42A-201ENST00000459584 SLC24A3Q9HC58 644 aa8.83□□□□□ -1
SNORD42A-201ENST00000459584 SLF2Q8IX21 1173 aa8.81□□□□□ -1
SNORD42A-201ENST00000459584 MDM2Q00987 491 aaPredicted RBP8.8□□□□□ -1
SNORD42A-201ENST00000459584 SLC10A3P09131 477 aa8.79□□□□□ -1
SNORD42A-201ENST00000459584 DAXXQ9UER7 740 aaPredicted RBP8.79□□□□□ -1
SNORD42A-201ENST00000459584 DDX11L8A8MPP1 907 aa8.78□□□□□ -1
SNORD42A-201ENST00000459584 SLC4A3P48751 1232 aa8.78□□□□□ -1
SNORD42A-201ENST00000459584 APLP1P51693 650 aa8.78□□□□□ -1
SNORD42A-201ENST00000459584 AK7Q96M32 723 aa8.78□□□□□ -1
SNORD42A-201ENST00000459584 TRIM66O15016 1216 aa8.77□□□□□ -1.01
SNORD42A-201ENST00000459584 REPIN1Q9BWE0 567 aaKnown RBP8.77□□□□□ -1.01
SNORD42A-201ENST00000459584 TPRNQ4KMQ1 711 aa8.76□□□□□ -1.01
SNORD42A-201ENST00000459584 RDH13Q8NBN7 331 aa8.76□□□□□ -1.01
SNORD42A-201ENST00000459584 CFHP08603 1231 aa8.74□□□□□ -1.01
SNORD42A-201ENST00000459584 NYAP1Q6ZVC0 841 aa8.74□□□□□ -1.01
SNORD42A-201ENST00000459584 TTLL12Q14166 644 aaPredicted RBP8.73□□□□□ -1.01
SNORD42A-201ENST00000459584 GPCPD1Q9NPB8 672 aa8.73□□□□□ -1.01
SNORD42A-201ENST00000459584 CLCN1P35523 988 aa8.72□□□□□ -1.01
SNORD42A-201ENST00000459584 AMHR2Q16671 573 aa8.72□□□□□ -1.01
SNORD42A-201ENST00000459584 NECTIN2Q92692 538 aa8.72□□□□□ -1.01
SNORD42A-201ENST00000459584 TMUB1Q9BVT8 246 aa8.72□□□□□ -1.01
SNORD42A-201ENST00000459584 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
SNORD42A-201ENST00000459584 RSPH4AQ5TD94 716 aa8.71□□□□□ -1.02
SNORD42A-201ENST00000459584 SULF1Q8IWU6 871 aa8.71□□□□□ -1.02
SNORD42A-201ENST00000459584 PRKCSHP14314 528 aaPredicted RBP8.7□□□□□ -1.02
SNORD42A-201ENST00000459584 PDE4DQ08499 809 aa8.7□□□□□ -1.02
SNORD42A-201ENST00000459584 KMT5BQ4FZB7 885 aa8.7□□□□□ -1.02
SNORD42A-201ENST00000459584 FAM217BQ9NTX9 383 aaPredicted RBP8.7□□□□□ -1.02
SNORD42A-201ENST00000459584 CD46P15529 392 aa8.69□□□□□ -1.02
SNORD42A-201ENST00000459584 SSTR3P32745 418 aaPredicted RBP8.69□□□□□ -1.02
SNORD42A-201ENST00000459584 COPS2P61201 443 aa8.69□□□□□ -1.02
SNORD42A-201ENST00000459584 GIGYF2Q6Y7W6 1299 aaKnown RBP8.69□□□□□ -1.02
SNORD42A-201ENST00000459584 PARP9Q8IXQ6 854 aa8.69□□□□□ -1.02
SNORD42A-201ENST00000459584 MTRQ99707 1265 aa8.69□□□□□ -1.02
SNORD42A-201ENST00000459584 ACTN4O43707 911 aaKnown RBP8.68□□□□□ -1.02
SNORD42A-201ENST00000459584 GCGRP47871 477 aa8.68□□□□□ -1.02
SNORD42A-201ENST00000459584 TJAP1Q5JTD0 557 aa8.68□□□□□ -1.02
SNORD42A-201ENST00000459584 PCDHB3Q9Y5E6 796 aa8.68□□□□□ -1.02
SNORD42A-201ENST00000459584 PUS10Q3MIT2 529 aaKnown RBP8.67□□□□□ -1.02
SNORD42A-201ENST00000459584 BLOC1S3Q6QNY0 202 aa8.67□□□□□ -1.02
SNORD42A-201ENST00000459584 ZNF516Q92618 1163 aa8.67□□□□□ -1.02
SNORD42A-201ENST00000459584 PRR14Q9BWN1 585 aa8.67□□□□□ -1.02
SNORD42A-201ENST00000459584 ITGBL1O95965 494 aaPredicted RBP8.66□□□□□ -1.02
SNORD42A-201ENST00000459584 FUT2Q10981 343 aa8.66□□□□□ -1.02
SNORD42A-201ENST00000459584 KCNC4Q03721 635 aa8.65□□□□□ -1.02
SNORD42A-201ENST00000459584 MS4A1P11836 297 aa8.64□□□□□ -1.03
SNORD42A-201ENST00000459584 IL21Q9HBE4 155 aa8.64□□□□□ -1.03
SNORD42A-201ENST00000459584 GPBP1L1Q9HC44 474 aaPredicted RBP8.63□□□□□ -1.03
SNORD42A-201ENST00000459584 KDM4AO75164 1064 aa8.62□□□□□ -1.03
SNORD42A-201ENST00000459584 NKX2-3Q8TAU0 364 aa8.62□□□□□ -1.03
SNORD42A-201ENST00000459584 BEGAINQ9BUH8 593 aa8.62□□□□□ -1.03
SNORD42A-201ENST00000459584 ZPR1O75312 459 aa8.61□□□□□ -1.03
SNORD42A-201ENST00000459584 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
SNORD42A-201ENST00000459584 HLA-CQ95604 372 aa8.61□□□□□ -1.03
SNORD42A-201ENST00000459584 TLL1O43897 1013 aa8.6□□□□□ -1.03
SNORD42A-201ENST00000459584 MORN1Q5T089 497 aa8.6□□□□□ -1.03
SNORD42A-201ENST00000459584 NUTM1Q86Y26 1132 aa8.6□□□□□ -1.03
SNORD42A-201ENST00000459584 SCUBE3Q8IX30 993 aa8.6□□□□□ -1.03
SNORD42A-201ENST00000459584 SLC27A5Q9Y2P5 690 aa8.59□□□□□ -1.03
SNORD42A-201ENST00000459584 NR1I2O75469 434 aa8.58□□□□□ -1.04
SNORD42A-201ENST00000459584 GUCA2AQ02747 115 aa8.58□□□□□ -1.04
SNORD42A-201ENST00000459584 IFFO2Q5TF58 517 aa8.58□□□□□ -1.04
SNORD42A-201ENST00000459584 SPIRE2Q8WWL2 714 aa8.58□□□□□ -1.04
SNORD42A-201ENST00000459584 KDM4CQ9H3R0 1056 aa8.58□□□□□ -1.04
SNORD42A-201ENST00000459584 HOXA2O43364 376 aa8.56□□□□□ -1.04
SNORD42A-201ENST00000459584 NDUFV2P19404 249 aa8.56□□□□□ -1.04
SNORD42A-201ENST00000459584 NEUROD2Q15784 382 aa8.56□□□□□ -1.04
SNORD42A-201ENST00000459584 GRIPAP1Q4V328 841 aa8.56□□□□□ -1.04
SNORD42A-201ENST00000459584 USP46P62068 366 aa8.55□□□□□ -1.04
SNORD42A-201ENST00000459584 A0A0G2JS52 829 aa8.54□□□□□ -1.04
SNORD42A-201ENST00000459584 MOXD2PA6NHM9 499 aa8.54□□□□□ -1.04
SNORD42A-201ENST00000459584 RNF19BQ6ZMZ0 732 aa8.54□□□□□ -1.04
SNORD42A-201ENST00000459584 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
SNORD42A-201ENST00000459584 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
SNORD42A-201ENST00000459584 PPP1R18Q6NYC8 613 aa8.53□□□□□ -1.04
SNORD42A-201ENST00000459584 SPSB2Q99619 263 aa8.53□□□□□ -1.04
SNORD42A-201ENST00000459584 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.05
SNORD42A-201ENST00000459584 BRICD5Q6PL45 260 aa8.52□□□□□ -1.05
SNORD42A-201ENST00000459584 SYMPKQ92797 1274 aaKnown RBP8.52□□□□□ -1.05
SNORD42A-201ENST00000459584 THAP11Q96EK4 314 aa8.52□□□□□ -1.05
SNORD42A-201ENST00000459584 FMNL1O95466 1100 aaPredicted RBP8.51□□□□□ -1.05
SNORD42A-201ENST00000459584 S1PR4O95977 384 aa8.51□□□□□ -1.05
SNORD42A-201ENST00000459584 ADH1BP00325 375 aa8.51□□□□□ -1.05
SNORD42A-201ENST00000459584 FDX1P10109 184 aa8.51□□□□□ -1.05
SNORD42A-201ENST00000459584 PCDHGC3Q9UN70 934 aa8.51□□□□□ -1.05
SNORD42A-201ENST00000459584 PPEF1O14829 653 aaPredicted RBP8.5□□□□□ -1.05
SNORD42A-201ENST00000459584 FAM160A2Q8N612 972 aaPredicted RBP8.49□□□□□ -1.05
SNORD42A-201ENST00000459584 SLC6A16Q9GZN6 736 aa8.49□□□□□ -1.05
SNORD42A-201ENST00000459584 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.49□□□□□ -1.05
SNORD42A-201ENST00000459584 PLEKHG3A1L390 1219 aa8.48□□□□□ -1.05
SNORD42A-201ENST00000459584 DIXDC1Q155Q3 683 aa8.48□□□□□ -1.05
SNORD42A-201ENST00000459584 Q3C1V9 767 aa8.48□□□□□ -1.05
SNORD42A-201ENST00000459584 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms