RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 HS1BP3Q53T59 392 aa6.09□□□□□ -1.43
PCDH9-203ENST00000456367 MNS1Q8NEH6 495 aa6.09□□□□□ -1.43
PCDH9-203ENST00000456367 PRIMPOLQ96LW4 560 aa6.09□□□□□ -1.43
PCDH9-203ENST00000456367 COG6Q9Y2V7 657 aa6.09□□□□□ -1.43
PCDH9-203ENST00000456367 AKNAQ7Z591 1439 aa6.09□□□□□ -1.43
PCDH9-203ENST00000456367 SMAP1Q8IYB5 467 aaPredicted RBP6.09□□□□□ -1.43
PCDH9-203ENST00000456367 GPATCH3Q96I76 525 aa6.09□□□□□ -1.43
PCDH9-203ENST00000456367 IFT57Q9NWB7 429 aa6.09□□□□□ -1.43
PCDH9-203ENST00000456367 PLEKHH2Q8IVE3 1493 aa6.09□□□□□ -1.43
PCDH9-203ENST00000456367 DZIP1LQ8IYY4 767 aaKnown RBP6.09□□□□□ -1.43
PCDH9-203ENST00000456367 U2AF1L5P0DN76 240 aaPredicted RBP6.08□□□□□ -1.44
PCDH9-203ENST00000456367 U2AF1Q01081 240 aaKnown RBP eCLIP6.08□□□□□ -1.44
PCDH9-203ENST00000456367 LEKR1Q6ZMV7 388 aa6.08□□□□□ -1.44
PCDH9-203ENST00000456367 NOC3LQ8WTT2 800 aaKnown RBP6.08□□□□□ -1.44
PCDH9-203ENST00000456367 CUX1P39880 1505 aa6.08□□□□□ -1.44
PCDH9-203ENST00000456367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.08□□□□□ -1.44
PCDH9-203ENST00000456367 STAC3Q96MF2 364 aa6.08□□□□□ -1.44
PCDH9-203ENST00000456367 ROCK1Q13464 1354 aa6.08□□□□□ -1.44
PCDH9-203ENST00000456367 KIF2AO00139 706 aaPredicted RBP6.08□□□□□ -1.44
PCDH9-203ENST00000456367 PNISRQ8TF01 805 aaKnown RBP6.08□□□□□ -1.44
PCDH9-203ENST00000456367 ZNF592Q92610 1267 aa6.08□□□□□ -1.44
PCDH9-203ENST00000456367 POGKQ9P215 609 aa6.08□□□□□ -1.44
PCDH9-203ENST00000456367 CDC45O75419 566 aa6.08□□□□□ -1.44
PCDH9-203ENST00000456367 RSPH4AQ5TD94 716 aa6.08□□□□□ -1.44
PCDH9-203ENST00000456367 NUP155O75694 1391 aa6.08□□□□□ -1.44
PCDH9-203ENST00000456367 KANK1Q14678 1352 aa6.08□□□□□ -1.44
PCDH9-203ENST00000456367 ST20-MTHFSA0A0A6YYL1 179 aa6.07□□□□□ -1.44
PCDH9-203ENST00000456367 TPM1P09493 284 aa6.07□□□□□ -1.44
PCDH9-203ENST00000456367 CCDC112Q8NEF3 446 aa6.07□□□□□ -1.44
PCDH9-203ENST00000456367 DEF6Q9H4E7 631 aa6.07□□□□□ -1.44
PCDH9-203ENST00000456367 ANKRD45Q5TZF3 282 aa6.07□□□□□ -1.44
PCDH9-203ENST00000456367 RDXP35241 583 aaKnown RBP6.07□□□□□ -1.44
PCDH9-203ENST00000456367 GNL2Q13823 731 aaKnown RBP6.07□□□□□ -1.44
PCDH9-203ENST00000456367 CCDC9Q9Y3X0 531 aaKnown RBP6.07□□□□□ -1.44
PCDH9-203ENST00000456367 HOMER1Q86YM7 354 aa6.07□□□□□ -1.44
PCDH9-203ENST00000456367 PANK3Q9H999 370 aa6.07□□□□□ -1.44
PCDH9-203ENST00000456367 ERICH3Q5RHP9 1530 aa6.07□□□□□ -1.44
PCDH9-203ENST00000456367 CT47B1P0C2W7 299 aaPredicted RBP6.06□□□□□ -1.44
PCDH9-203ENST00000456367 DNAJC2Q99543 621 aaKnown RBP6.06□□□□□ -1.44
PCDH9-203ENST00000456367 CGNQ9P2M7 1197 aaKnown RBP6.06□□□□□ -1.44
PCDH9-203ENST00000456367 TPD52L1Q16890 204 aaPredicted RBP6.06□□□□□ -1.44
PCDH9-203ENST00000456367 K7ELQ4 463 aaPredicted RBP6.06□□□□□ -1.44
PCDH9-203ENST00000456367 KIF20AO95235 890 aa6.06□□□□□ -1.44
PCDH9-203ENST00000456367 NAT10Q9H0A0 1025 aaKnown RBP6.06□□□□□ -1.44
PCDH9-203ENST00000456367 FGD6Q6ZV73 1430 aa6.06□□□□□ -1.44
PCDH9-203ENST00000456367 CDR1P51861 262 aa6.06□□□□□ -1.44
PCDH9-203ENST00000456367 NBPF1Q3BBV0 1214 aa6.06□□□□□ -1.44
PCDH9-203ENST00000456367 API5Q9BZZ5 524 aaKnown RBP6.06□□□□□ -1.44
PCDH9-203ENST00000456367 RUFY2Q8WXA3 655 aa6.05□□□□□ -1.44
PCDH9-203ENST00000456367 LRRC9Q6ZRR7 1453 aa6.05□□□□□ -1.44
PCDH9-203ENST00000456367 CCDC144AA2RUR9 1427 aa6.05□□□□□ -1.44
PCDH9-203ENST00000456367 WIZO95785 1651 aa6.05□□□□□ -1.44
PCDH9-203ENST00000456367 DHX29Q7Z478 1369 aaKnown RBP6.05□□□□□ -1.44
PCDH9-203ENST00000456367 TRIM6-TRIM34B2RNG4 842 aa6.05□□□□□ -1.44
PCDH9-203ENST00000456367 FOXD1Q16676 465 aa6.05□□□□□ -1.44
PCDH9-203ENST00000456367 FAM107BQ9H098 131 aa6.05□□□□□ -1.44
PCDH9-203ENST00000456367 WDR97A6NE52 1622 aa6.05□□□□□ -1.44
PCDH9-203ENST00000456367 CCDC146Q8IYE0 955 aa6.05□□□□□ -1.44
PCDH9-203ENST00000456367 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.05□□□□□ -1.44
PCDH9-203ENST00000456367 OFD1O75665 1012 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 EIF3JO75822 258 aaKnown RBP6.04□□□□□ -1.44
PCDH9-203ENST00000456367 TSR1Q2NL82 804 aaKnown RBP6.04□□□□□ -1.44
PCDH9-203ENST00000456367 CTR9Q6PD62 1173 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 GCC1Q96CN9 775 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 TIGD1Q96MW7 591 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 SMARCA2P51531 1590 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 APAF1O14727 1248 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 SF3A1Q15459 793 aaKnown RBP6.04□□□□□ -1.44
PCDH9-203ENST00000456367 HDGFL2Q7Z4V5 671 aaPredicted RBP6.04□□□□□ -1.44
PCDH9-203ENST00000456367 NAP1L2Q9ULW6 460 aaPredicted RBP6.04□□□□□ -1.44
PCDH9-203ENST00000456367 PDZRN3Q9UPQ7 1066 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 RUNDC1Q96C34 613 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 PRPF40AO75400 957 aaKnown RBP6.04□□□□□ -1.44
PCDH9-203ENST00000456367 CCDC192P0DO97 292 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 UVSSAQ2YD98 709 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 BBXQ8WY36 941 aaPredicted RBP6.04□□□□□ -1.44
PCDH9-203ENST00000456367 ESF1Q9H501 851 aaKnown RBP6.04□□□□□ -1.44
PCDH9-203ENST00000456367 SMC3Q9UQE7 1217 aa6.04□□□□□ -1.44
PCDH9-203ENST00000456367 RUSC2Q8N2Y8 1516 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 CCDC94Q9BW85 323 aaPredicted RBP6.03□□□□□ -1.44
PCDH9-203ENST00000456367 STK31Q9BXU1 1019 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 HOOK1Q9UJC3 728 aaKnown RBP6.03□□□□□ -1.44
PCDH9-203ENST00000456367 H3BQV1 296 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 IFFO2Q5TF58 517 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 MYOM3Q5VTT5 1437 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 ERLIN1O75477 346 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 ZKSCAN1P17029 563 aaPredicted RBP6.03□□□□□ -1.44
PCDH9-203ENST00000456367 PDCP20941 246 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 TMEM132AQ24JP5 1023 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 CREBRFQ8IUR6 639 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 CCAR2Q8N163 923 aaKnown RBP6.03□□□□□ -1.44
PCDH9-203ENST00000456367 WDR33Q9C0J8 1336 aaKnown RBP6.03□□□□□ -1.44
PCDH9-203ENST00000456367 DCTN1Q14203 1278 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 RNF214Q8ND24 703 aa6.03□□□□□ -1.44
PCDH9-203ENST00000456367 RTF1Q92541 710 aaKnown RBP6.03□□□□□ -1.44
PCDH9-203ENST00000456367 H0YHG0 523 aa6.02□□□□□ -1.45
PCDH9-203ENST00000456367 XRCC6P12956 609 aaKnown RBP eCLIP6.02□□□□□ -1.45
PCDH9-203ENST00000456367 FOXD4L5Q5VV16 416 aaPredicted RBP6.02□□□□□ -1.45
PCDH9-203ENST00000456367 FOXD4L4Q8WXT5 416 aaPredicted RBP6.02□□□□□ -1.45
PCDH9-203ENST00000456367 TRIM5Q9C035 493 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms