RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 KANK1Q14678 1352 aa27.02■■□□□ 1.92
CSPG5-203ENST00000456150 IQGAP1P46940 1657 aa27.02■■□□□ 1.92
CSPG5-203ENST00000456150 VWDEQ8N2E2 1590 aa27■■□□□ 1.91
CSPG5-203ENST00000456150 CLTCL1P53675 1640 aa27■■□□□ 1.91
CSPG5-203ENST00000456150 YEATS2Q9ULM3 1422 aa26.99■■□□□ 1.91
CSPG5-203ENST00000456150 DNAJC5Q9H3Z4 198 aa26.99■■□□□ 1.91
CSPG5-203ENST00000456150 DIP2CQ9Y2E4 1556 aa26.98■■□□□ 1.91
CSPG5-203ENST00000456150 MROH1Q8NDA8 1641 aa26.97■■□□□ 1.91
CSPG5-203ENST00000456150 B4GALNT3Q6L9W6 998 aa26.96■■□□□ 1.91
CSPG5-203ENST00000456150 NEURL4Q96JN8 1562 aa26.96■■□□□ 1.91
CSPG5-203ENST00000456150 ANP32EQ9BTT0 268 aa26.96■■□□□ 1.91
CSPG5-203ENST00000456150 ZMYM4Q5VZL5 1548 aa26.95■■□□□ 1.9
CSPG5-203ENST00000456150 INSRP06213 1382 aa26.94■■□□□ 1.9
CSPG5-203ENST00000456150 PANK3Q9H999 370 aa26.93■■□□□ 1.9
CSPG5-203ENST00000456150 KIAA1210Q9ULL0 1709 aa26.92■■□□□ 1.9
CSPG5-203ENST00000456150 SCAF11Q99590 1463 aaKnown RBP26.91■■□□□ 1.9
CSPG5-203ENST00000456150 PDE3BQ13370 1112 aa26.89■■□□□ 1.89
CSPG5-203ENST00000456150 FANCIQ9NVI1 1328 aa26.88■■□□□ 1.89
CSPG5-203ENST00000456150 CDCA8Q53HL2 280 aa26.88■■□□□ 1.89
CSPG5-203ENST00000456150 CC2D1BQ5T0F9 858 aaKnown RBP26.88■■□□□ 1.89
CSPG5-203ENST00000456150 GGT6Q6P531 493 aa26.86■■□□□ 1.89
CSPG5-203ENST00000456150 SYNMO15061 1565 aa26.86■■□□□ 1.89
CSPG5-203ENST00000456150 EIF3AQ14152 1382 aaKnown RBP26.85■■□□□ 1.89
CSPG5-203ENST00000456150 BLMP54132 1417 aaPredicted RBP26.83■■□□□ 1.89
CSPG5-203ENST00000456150 KIF1BO60333 1816 aa26.83■■□□□ 1.89
CSPG5-203ENST00000456150 SENP3-EIF4A1A0A087X0R7 540 aa26.83■■□□□ 1.89
CSPG5-203ENST00000456150 TRHP20396 242 aaPredicted RBP26.83■■□□□ 1.89
CSPG5-203ENST00000456150 EFCAB6Q5THR3 1501 aa26.82■■□□□ 1.88
CSPG5-203ENST00000456150 MYOM2P54296 1465 aa26.81■■□□□ 1.88
CSPG5-203ENST00000456150 CCDC136Q96JN2 1154 aa26.8■■□□□ 1.88
CSPG5-203ENST00000456150 LMTK2Q8IWU2 1503 aa26.78■■□□□ 1.88
CSPG5-203ENST00000456150 KNSTRNQ9Y448 316 aa26.78■■□□□ 1.88
CSPG5-203ENST00000456150 IFT172Q9UG01 1749 aa26.77■■□□□ 1.88
CSPG5-203ENST00000456150 SLC24A1O60721 1099 aa26.76■■□□□ 1.87
CSPG5-203ENST00000456150 KDM5AP29375 1690 aaKnown RBP26.76■■□□□ 1.87
CSPG5-203ENST00000456150 RRP1P56182 461 aaKnown RBP26.75■■□□□ 1.87
CSPG5-203ENST00000456150 MYOM1P52179 1685 aa26.75■■□□□ 1.87
CSPG5-203ENST00000456150 RCAN3Q9UKA8 241 aa26.75■■□□□ 1.87
CSPG5-203ENST00000456150 SIGLEC1Q9BZZ2 1709 aa26.74■■□□□ 1.87
CSPG5-203ENST00000456150 ASXL1Q8IXJ9 1541 aa26.73■■□□□ 1.87
CSPG5-203ENST00000456150 ABCC3O15438 1527 aa26.72■■□□□ 1.87
CSPG5-203ENST00000456150 UGGT1Q9NYU2 1555 aa26.72■■□□□ 1.87
CSPG5-203ENST00000456150 SALL2Q9Y467 1007 aaPredicted RBP26.71■■□□□ 1.87
CSPG5-203ENST00000456150 NPC1L1Q9UHC9 1359 aa26.7■■□□□ 1.86
CSPG5-203ENST00000456150 ARHGEF40Q8TER5 1519 aa26.7■■□□□ 1.86
CSPG5-203ENST00000456150 MROH2AA6NES4 1674 aa26.7■■□□□ 1.86
CSPG5-203ENST00000456150 AMER1Q5JTC6 1135 aaPredicted RBP26.69■■□□□ 1.86
CSPG5-203ENST00000456150 REREQ9P2R6 1566 aa26.69■■□□□ 1.86
CSPG5-203ENST00000456150 NPATQ14207 1427 aa26.67■■□□□ 1.86
CSPG5-203ENST00000456150 PPP2R1AP30153 589 aa26.67■■□□□ 1.86
CSPG5-203ENST00000456150 NRXN1Q9ULB1 1477 aa26.66■■□□□ 1.86
CSPG5-203ENST00000456150 MSH5O43196 834 aa26.66■■□□□ 1.86
CSPG5-203ENST00000456150 CAMSAP1Q5T5Y3 1602 aa26.65■■□□□ 1.86
CSPG5-203ENST00000456150 PIK3C2GO75747 1445 aa26.65■■□□□ 1.86
CSPG5-203ENST00000456150 ADGRB3O60242 1522 aa26.65■■□□□ 1.86
CSPG5-203ENST00000456150 MYO3AQ8NEV4 1616 aa26.65■■□□□ 1.86
CSPG5-203ENST00000456150 AGLP35573 1532 aa26.63■■□□□ 1.85
CSPG5-203ENST00000456150 ADGRF5Q8IZF2 1346 aa26.63■■□□□ 1.85
CSPG5-203ENST00000456150 CFAP70Q5T0N1 1121 aa26.63■■□□□ 1.85
CSPG5-203ENST00000456150 WDR43Q15061 677 aaKnown RBP eCLIP26.62■■□□□ 1.85
CSPG5-203ENST00000456150 CDCA7LQ96GN5 454 aa26.62■■□□□ 1.85
CSPG5-203ENST00000456150 CFAP65Q6ZU64 1925 aaKnown RBP26.61■■□□□ 1.85
CSPG5-203ENST00000456150 SETBP1Q9Y6X0 1596 aa26.61■■□□□ 1.85
CSPG5-203ENST00000456150 ERVK-7P63135 1459 aa26.61■■□□□ 1.85
CSPG5-203ENST00000456150 ADAMTS8Q9UP79 889 aa26.61■■□□□ 1.85
CSPG5-203ENST00000456150 ZC3H13Q5T200 1668 aaKnown RBP26.59■■□□□ 1.85
CSPG5-203ENST00000456150 MLECQ14165 292 aa26.59■■□□□ 1.85
CSPG5-203ENST00000456150 SBNO2Q9Y2G9 1366 aa26.59■■□□□ 1.85
CSPG5-203ENST00000456150 PPLO60437 1756 aa26.57■■□□□ 1.84
CSPG5-203ENST00000456150 EXOC6Q8TAG9 804 aa26.57■■□□□ 1.84
CSPG5-203ENST00000456150 ERICH6Q7L0X2 663 aa26.56■■□□□ 1.84
CSPG5-203ENST00000456150 NOS1P29475 1434 aa26.55■■□□□ 1.84
CSPG5-203ENST00000456150 ARHGAP31Q2M1Z3 1444 aa26.52■■□□□ 1.84
CSPG5-203ENST00000456150 CLTCQ00610 1675 aaKnown RBP26.49■■□□□ 1.83
CSPG5-203ENST00000456150 CHGAP10645 457 aaKnown RBP26.49■■□□□ 1.83
CSPG5-203ENST00000456150 RPGRIP1LQ68CZ1 1315 aa26.49■■□□□ 1.83
CSPG5-203ENST00000456150 CENPJQ9HC77 1338 aaPredicted RBP26.48■■□□□ 1.83
CSPG5-203ENST00000456150 PLEKHH1Q9ULM0 1364 aa26.47■■□□□ 1.83
CSPG5-203ENST00000456150 ZNF521Q96K83 1311 aa26.46■■□□□ 1.83
CSPG5-203ENST00000456150 QRICH2Q9H0J4 1663 aa26.46■■□□□ 1.83
CSPG5-203ENST00000456150 FBXO31Q5XUX0 539 aaPredicted RBP26.45■■□□□ 1.83
CSPG5-203ENST00000456150 C14orf93Q9H972 538 aaKnown RBP26.45■■□□□ 1.82
CSPG5-203ENST00000456150 PPP6R1Q9UPN7 881 aa26.45■■□□□ 1.82
CSPG5-203ENST00000456150 PREX1Q8TCU6 1659 aa26.44■■□□□ 1.82
CSPG5-203ENST00000456150 GOLGA2Q08379 1002 aa26.43■■□□□ 1.82
CSPG5-203ENST00000456150 ADGRB1O14514 1584 aa26.43■■□□□ 1.82
CSPG5-203ENST00000456150 PIK3C2BO00750 1634 aa26.42■■□□□ 1.82
CSPG5-203ENST00000456150 TCERG1O14776 1098 aaKnown RBP26.42■■□□□ 1.82
CSPG5-203ENST00000456150 DUSP27Q5VZP5 1158 aa26.42■■□□□ 1.82
CSPG5-203ENST00000456150 CARD14Q9BXL6 1004 aa26.42■■□□□ 1.82
CSPG5-203ENST00000456150 PLIN1O60240 522 aa26.4■■□□□ 1.82
CSPG5-203ENST00000456150 IDI1Q13907 227 aa26.38■■□□□ 1.81
CSPG5-203ENST00000456150 NGEFQ8N5V2 710 aa26.38■■□□□ 1.81
CSPG5-203ENST00000456150 ANP32AP39687 249 aaKnown RBP26.37■■□□□ 1.81
CSPG5-203ENST00000456150 CRBNQ96SW2 442 aa26.37■■□□□ 1.81
CSPG5-203ENST00000456150 TRAK1Q9UPV9 953 aa26.37■■□□□ 1.81
CSPG5-203ENST00000456150 USP32Q8NFA0 1604 aa26.35■■□□□ 1.81
CSPG5-203ENST00000456150 POLR3AO14802 1390 aaPredicted RBP26.35■■□□□ 1.81
CSPG5-203ENST00000456150 SLFN5Q08AF3 891 aa26.34■■□□□ 1.81
CSPG5-203ENST00000456150 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms