RNA–Protein interactions for RNA: ENST00000455403.1

SAMM50P1-201, Transcript of SAMM50 sorting and assembly machinery component pseudogene 1, humanhuman

BASIC

Gene SAMM50P1, Length 1,399 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50P1-201ENST00000455403 ERCC6L2Q5T890 1561 aa9.46□□□□□ -0.9
SAMM50P1-201ENST00000455403 MCM6Q14566 821 aa9.45□□□□□ -0.9
SAMM50P1-201ENST00000455403 POTEEQ6S8J3 1075 aa9.45□□□□□ -0.9
SAMM50P1-201ENST00000455403 RBM27Q9P2N5 1060 aaKnown RBP9.45□□□□□ -0.9
SAMM50P1-201ENST00000455403 GNPATO15228 680 aa9.44□□□□□ -0.9
SAMM50P1-201ENST00000455403 TTLL12Q14166 644 aaPredicted RBP9.44□□□□□ -0.9
SAMM50P1-201ENST00000455403 CDAN1Q8IWY9 1227 aa9.44□□□□□ -0.9
SAMM50P1-201ENST00000455403 ARHGAP33O14559 1287 aa9.43□□□□□ -0.9
SAMM50P1-201ENST00000455403 COL9A1P20849 921 aa9.43□□□□□ -0.9
SAMM50P1-201ENST00000455403 KCNH8Q96L42 1107 aa9.43□□□□□ -0.9
SAMM50P1-201ENST00000455403 KCNK17Q96T54 332 aa9.43□□□□□ -0.9
SAMM50P1-201ENST00000455403 MS4A1P11836 297 aa9.42□□□□□ -0.9
SAMM50P1-201ENST00000455403 PCMTD1Q96MG8 357 aaPredicted RBP9.42□□□□□ -0.9
SAMM50P1-201ENST00000455403 ZNF777Q9ULD5 760 aaPredicted RBP9.42□□□□□ -0.9
SAMM50P1-201ENST00000455403 KCTD17Q8N5Z5 321 aa9.41□□□□□ -0.9
SAMM50P1-201ENST00000455403 GIGYF2Q6Y7W6 1299 aaKnown RBP9.4□□□□□ -0.9
SAMM50P1-201ENST00000455403 PROSER2Q86WR7 435 aaPredicted RBP9.4□□□□□ -0.9
SAMM50P1-201ENST00000455403 PSEN2P49810 448 aa9.39□□□□□ -0.91
SAMM50P1-201ENST00000455403 TTC13Q8NBP0 860 aa9.39□□□□□ -0.91
SAMM50P1-201ENST00000455403 POM121Q96HA1 1249 aa9.39□□□□□ -0.91
SAMM50P1-201ENST00000455403 TRAIPQ9BWF2 469 aa9.39□□□□□ -0.91
SAMM50P1-201ENST00000455403 PRSS12P56730 875 aa9.38□□□□□ -0.91
SAMM50P1-201ENST00000455403 CDCA7LQ96GN5 454 aa9.38□□□□□ -0.91
SAMM50P1-201ENST00000455403 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
SAMM50P1-201ENST00000455403 REPIN1Q9BWE0 567 aaKnown RBP9.38□□□□□ -0.91
SAMM50P1-201ENST00000455403 SLC4A5Q9BY07 1137 aa9.38□□□□□ -0.91
SAMM50P1-201ENST00000455403 PADI6Q6TGC4 694 aa9.37□□□□□ -0.91
SAMM50P1-201ENST00000455403 AXIN2Q9Y2T1 843 aa9.37□□□□□ -0.91
SAMM50P1-201ENST00000455403 ARAP1Q96P48 1450 aa9.37□□□□□ -0.91
SAMM50P1-201ENST00000455403 FNBP4Q8N3X1 1017 aaPredicted RBP9.37□□□□□ -0.91
SAMM50P1-201ENST00000455403 MYO15BQ96JP2 1530 aa9.37□□□□□ -0.91
SAMM50P1-201ENST00000455403 SCRIBQ14160 1630 aa9.36□□□□□ -0.91
SAMM50P1-201ENST00000455403 TRIM6-TRIM34B2RNG4 842 aa9.36□□□□□ -0.91
SAMM50P1-201ENST00000455403 DMRTA1Q5VZB9 504 aa9.36□□□□□ -0.91
SAMM50P1-201ENST00000455403 SH3D19Q5HYK7 790 aa9.35□□□□□ -0.91
SAMM50P1-201ENST00000455403 AEBP1Q8IUX7 1158 aa9.35□□□□□ -0.91
SAMM50P1-201ENST00000455403 TSKSQ9UJT2 592 aa9.35□□□□□ -0.91
SAMM50P1-201ENST00000455403 PROX2Q3B8N5 592 aa9.34□□□□□ -0.91
SAMM50P1-201ENST00000455403 CCDC97Q96F63 343 aaPredicted RBP9.34□□□□□ -0.91
SAMM50P1-201ENST00000455403 FAM198AQ9UFP1 575 aa9.34□□□□□ -0.91
SAMM50P1-201ENST00000455403 TK2O00142 265 aa9.33□□□□□ -0.92
SAMM50P1-201ENST00000455403 LSM11P83369 360 aaKnown RBP eCLIP9.33□□□□□ -0.92
SAMM50P1-201ENST00000455403 RAD21O60216 631 aa9.32□□□□□ -0.92
SAMM50P1-201ENST00000455403 SERPINA10Q9UK55 444 aa9.32□□□□□ -0.92
SAMM50P1-201ENST00000455403 ADGRG1Q9Y653 693 aa9.32□□□□□ -0.92
SAMM50P1-201ENST00000455403 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
SAMM50P1-201ENST00000455403 KRTAP3-2Q9BYR7 98 aa9.31□□□□□ -0.92
SAMM50P1-201ENST00000455403 VPS9D1Q9Y2B5 631 aa9.31□□□□□ -0.92
SAMM50P1-201ENST00000455403 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
SAMM50P1-201ENST00000455403 RETREG2Q8NC44 543 aa9.3□□□□□ -0.92
SAMM50P1-201ENST00000455403 HECW2Q9P2P5 1572 aa9.3□□□□□ -0.92
SAMM50P1-201ENST00000455403 RABGEF1Q9UJ41 708 aa9.3□□□□□ -0.92
SAMM50P1-201ENST00000455403 KIF21AQ7Z4S6 1674 aa9.3□□□□□ -0.92
SAMM50P1-201ENST00000455403 PACS2Q86VP3 889 aa9.29□□□□□ -0.92
SAMM50P1-201ENST00000455403 OATP04181 439 aa9.28□□□□□ -0.92
SAMM50P1-201ENST00000455403 ADGRD1Q6QNK2 874 aa9.28□□□□□ -0.92
SAMM50P1-201ENST00000455403 METTL3Q86U44 580 aaKnown RBP9.28□□□□□ -0.92
SAMM50P1-201ENST00000455403 RGS22Q8NE09 1264 aa9.28□□□□□ -0.92
SAMM50P1-201ENST00000455403 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
SAMM50P1-201ENST00000455403 PXYLP1Q8TE99 480 aa9.27□□□□□ -0.93
SAMM50P1-201ENST00000455403 TMUB1Q9BVT8 246 aa9.27□□□□□ -0.93
SAMM50P1-201ENST00000455403 KIAA1468Q9P260 1216 aa9.27□□□□□ -0.93
SAMM50P1-201ENST00000455403 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.93
SAMM50P1-201ENST00000455403 C3orf80F5H4A9 247 aa9.26□□□□□ -0.93
SAMM50P1-201ENST00000455403 ZEB1P37275 1124 aaPredicted RBP9.26□□□□□ -0.93
SAMM50P1-201ENST00000455403 SKIV2LQ15477 1246 aaKnown RBP9.26□□□□□ -0.93
SAMM50P1-201ENST00000455403 RBM46Q8TBY0 533 aaKnown RBP9.26□□□□□ -0.93
SAMM50P1-201ENST00000455403 TATDN2Q93075 761 aa9.26□□□□□ -0.93
SAMM50P1-201ENST00000455403 EYA1Q99502 592 aa9.26□□□□□ -0.93
SAMM50P1-201ENST00000455403 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
SAMM50P1-201ENST00000455403 BHMG1C9JSJ3 638 aaPredicted RBP9.25□□□□□ -0.93
SAMM50P1-201ENST00000455403 HRO43593 1189 aa9.25□□□□□ -0.93
SAMM50P1-201ENST00000455403 IRF5Q13568 498 aa9.25□□□□□ -0.93
SAMM50P1-201ENST00000455403 FAM161AQ3B820 660 aa9.25□□□□□ -0.93
SAMM50P1-201ENST00000455403 NUDT18Q6ZVK8 323 aa9.25□□□□□ -0.93
SAMM50P1-201ENST00000455403 PCGF6Q9BYE7 350 aa9.25□□□□□ -0.93
SAMM50P1-201ENST00000455403 MTMR7Q9Y216 660 aa9.25□□□□□ -0.93
SAMM50P1-201ENST00000455403 COG6Q9Y2V7 657 aa9.25□□□□□ -0.93
SAMM50P1-201ENST00000455403 PDS5BQ9NTI5 1447 aa9.25□□□□□ -0.93
SAMM50P1-201ENST00000455403 NBPF3Q9H094 633 aa9.24□□□□□ -0.93
SAMM50P1-201ENST00000455403 MDM2Q00987 491 aaPredicted RBP9.24□□□□□ -0.93
SAMM50P1-201ENST00000455403 TMCO4Q5TGY1 634 aa9.24□□□□□ -0.93
SAMM50P1-201ENST00000455403 PHOX2BQ99453 314 aa9.24□□□□□ -0.93
SAMM50P1-201ENST00000455403 LAPTM4BQ86VI4 370 aa9.23□□□□□ -0.93
SAMM50P1-201ENST00000455403 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
SAMM50P1-201ENST00000455403 TTBK1Q5TCY1 1321 aaPredicted RBP9.23□□□□□ -0.93
SAMM50P1-201ENST00000455403 NCAPD3P42695 1498 aa9.22□□□□□ -0.93
SAMM50P1-201ENST00000455403 MRC2Q9UBG0 1479 aa9.22□□□□□ -0.93
SAMM50P1-201ENST00000455403 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.22□□□□□ -0.93
SAMM50P1-201ENST00000455403 CLCN1P35523 988 aa9.22□□□□□ -0.93
SAMM50P1-201ENST00000455403 MMRN1Q13201 1228 aa9.22□□□□□ -0.93
SAMM50P1-201ENST00000455403 ANKRD13DQ6ZTN6 518 aa9.22□□□□□ -0.93
SAMM50P1-201ENST00000455403 GPCPD1Q9NPB8 672 aa9.22□□□□□ -0.93
SAMM50P1-201ENST00000455403 POLR3EQ9NVU0 708 aa9.22□□□□□ -0.93
SAMM50P1-201ENST00000455403 ATP1B4Q9UN42 357 aaPredicted RBP9.22□□□□□ -0.93
SAMM50P1-201ENST00000455403 LAMC3Q9Y6N6 1575 aa9.21□□□□□ -0.93
SAMM50P1-201ENST00000455403 SYNJ2O15056 1496 aa9.21□□□□□ -0.94
SAMM50P1-201ENST00000455403 SPDYE5A6NIY4 337 aa9.21□□□□□ -0.94
SAMM50P1-201ENST00000455403 SMAPO00193 183 aa9.21□□□□□ -0.94
SAMM50P1-201ENST00000455403 DNAJB2P25686 324 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms