RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 PADI6Q6TGC4 694 aa7.21□□□□□ -1.26
RBM39-220ENST00000455343 P3H3Q8IVL6 736 aa7.21□□□□□ -1.26
RBM39-220ENST00000455343 NUDT18Q6ZVK8 323 aa7.2□□□□□ -1.26
RBM39-220ENST00000455343 SAMD7Q7Z3H4 446 aa7.2□□□□□ -1.26
RBM39-220ENST00000455343 URB2Q14146 1524 aaKnown RBP7.19□□□□□ -1.26
RBM39-220ENST00000455343 ARHGEF11O15085 1522 aa7.18□□□□□ -1.26
RBM39-220ENST00000455343 RGS20O76081 388 aa7.18□□□□□ -1.26
RBM39-220ENST00000455343 RIMBP3CA6NJZ7 1639 aa7.17□□□□□ -1.26
RBM39-220ENST00000455343 RIMBP3BA6NNM3 1639 aa7.17□□□□□ -1.26
RBM39-220ENST00000455343 RIMBP3Q9UFD9 1639 aa7.17□□□□□ -1.26
RBM39-220ENST00000455343 PPP4CP60510 307 aa7.17□□□□□ -1.26
RBM39-220ENST00000455343 KCNC4Q03721 635 aa7.16□□□□□ -1.26
RBM39-220ENST00000455343 CYB5RLQ6IPT4 315 aa7.16□□□□□ -1.26
RBM39-220ENST00000455343 PTGDRQ13258 359 aa7.15□□□□□ -1.26
RBM39-220ENST00000455343 SEMA3EO15041 775 aa7.14□□□□□ -1.27
RBM39-220ENST00000455343 ZNF608Q9ULD9 1512 aaPredicted RBP7.14□□□□□ -1.27
RBM39-220ENST00000455343 WIZO95785 1651 aa7.13□□□□□ -1.27
RBM39-220ENST00000455343 IFT140Q96RY7 1462 aa7.13□□□□□ -1.27
RBM39-220ENST00000455343 RNF40O75150 1001 aa7.13□□□□□ -1.27
RBM39-220ENST00000455343 SWT1Q5T5J6 900 aaKnown RBP7.13□□□□□ -1.27
RBM39-220ENST00000455343 EYA1Q99502 592 aa7.13□□□□□ -1.27
RBM39-220ENST00000455343 HDGFP51858 240 aaKnown RBP7.12□□□□□ -1.27
RBM39-220ENST00000455343 NUTM2FA1L443 756 aa7.11□□□□□ -1.27
RBM39-220ENST00000455343 TJAP1Q5JTD0 557 aa7.11□□□□□ -1.27
RBM39-220ENST00000455343 SLF2Q8IX21 1173 aa7.11□□□□□ -1.27
RBM39-220ENST00000455343 ARAP1Q96P48 1450 aa7.11□□□□□ -1.27
RBM39-220ENST00000455343 RSF1Q96T23 1441 aaPredicted RBP7.1□□□□□ -1.27
RBM39-220ENST00000455343 TESPA1A2RU30 521 aaPredicted RBP7.1□□□□□ -1.27
RBM39-220ENST00000455343 APLP1P51693 650 aa7.1□□□□□ -1.27
RBM39-220ENST00000455343 NECTIN2Q92692 538 aa7.1□□□□□ -1.27
RBM39-220ENST00000455343 MTRQ99707 1265 aa7.1□□□□□ -1.27
RBM39-220ENST00000455343 FCHSD2O94868 740 aa7.09□□□□□ -1.27
RBM39-220ENST00000455343 HAP1P54257 671 aaPredicted RBP7.09□□□□□ -1.27
RBM39-220ENST00000455343 IL21Q9HBE4 155 aa7.09□□□□□ -1.27
RBM39-220ENST00000455343 ADGRG1Q9Y653 693 aa7.09□□□□□ -1.27
RBM39-220ENST00000455343 DNAJB2P25686 324 aa7.08□□□□□ -1.28
RBM39-220ENST00000455343 RBM46Q8TBY0 533 aaKnown RBP7.08□□□□□ -1.28
RBM39-220ENST00000455343 SLC4A3P48751 1232 aa7.07□□□□□ -1.28
RBM39-220ENST00000455343 TOP2AP11388 1531 aaKnown RBP7.06□□□□□ -1.28
RBM39-220ENST00000455343 TOPBP1Q92547 1522 aa7.06□□□□□ -1.28
RBM39-220ENST00000455343 AQRO60306 1485 aaKnown RBP eCLIP7.06□□□□□ -1.283e-11■■■■□ 22.5
RBM39-220ENST00000455343 FAM161AQ3B820 660 aa7.06□□□□□ -1.28
RBM39-220ENST00000455343 TMEM134Q9H6X4 195 aa7.06□□□□□ -1.28
RBM39-220ENST00000455343 ABCC8Q09428 1581 aa7.05□□□□□ -1.28
RBM39-220ENST00000455343 RCCD1A6NED2 376 aa7.05□□□□□ -1.28
RBM39-220ENST00000455343 RBM26Q5T8P6 1007 aaKnown RBP7.05□□□□□ -1.28
RBM39-220ENST00000455343 ZNF516Q92618 1163 aa7.05□□□□□ -1.28
RBM39-220ENST00000455343 IRX2Q9BZI1 471 aaPredicted RBP7.05□□□□□ -1.28
RBM39-220ENST00000455343 HIC1Q14526 733 aa7.04□□□□□ -1.28
RBM39-220ENST00000455343 SMYD5Q6GMV2 418 aa7.04□□□□□ -1.28
RBM39-220ENST00000455343 KDM2AQ9Y2K7 1162 aa7.04□□□□□ -1.28
RBM39-220ENST00000455343 GPR37O15354 613 aa7.03□□□□□ -1.28
RBM39-220ENST00000455343 COPS2P61201 443 aa7.03□□□□□ -1.28
RBM39-220ENST00000455343 PRR14Q9BWN1 585 aa7.03□□□□□ -1.28
RBM39-220ENST00000455343 CCDC88BA6NC98 1476 aa7.03□□□□□ -1.28
RBM39-220ENST00000455343 EIF4G3O43432 1585 aaKnown RBP7.03□□□□□ -1.28
RBM39-220ENST00000455343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.02□□□□□ -1.29
RBM39-220ENST00000455343 PXYLP1Q8TE99 480 aa7.02□□□□□ -1.29
RBM39-220ENST00000455343 GNPATO15228 680 aa7.01□□□□□ -1.29
RBM39-220ENST00000455343 PCDHB3Q9Y5E6 796 aa7.01□□□□□ -1.29
RBM39-220ENST00000455343 OATP04181 439 aa7□□□□□ -1.29
RBM39-220ENST00000455343 PPP1R18Q6NYC8 613 aa7□□□□□ -1.29
RBM39-220ENST00000455343 NKX2-3Q8TAU0 364 aa7□□□□□ -1.29
RBM39-220ENST00000455343 TARBP1Q13395 1621 aaKnown RBP7□□□□□ -1.29
RBM39-220ENST00000455343 DNMBPQ6XZF7 1577 aa6.99□□□□□ -1.29
RBM39-220ENST00000455343 POLA1P09884 1462 aaPredicted RBP6.99□□□□□ -1.29
RBM39-220ENST00000455343 ZPR1O75312 459 aa6.99□□□□□ -1.29
RBM39-220ENST00000455343 CFHP08603 1231 aa6.99□□□□□ -1.29
RBM39-220ENST00000455343 FECHP22830 423 aa6.99□□□□□ -1.29
RBM39-220ENST00000455343 KMT5BQ4FZB7 885 aa6.99□□□□□ -1.29
RBM39-220ENST00000455343 BLOC1S3Q6QNY0 202 aa6.99□□□□□ -1.29
RBM39-220ENST00000455343 METTL3Q86U44 580 aaKnown RBP6.99□□□□□ -1.29
RBM39-220ENST00000455343 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.99□□□□□ -1.29
RBM39-220ENST00000455343 TDRD9Q8NDG6 1382 aaKnown RBP6.98□□□□□ -1.29
RBM39-220ENST00000455343 CLASP1Q7Z460 1538 aa6.98□□□□□ -1.29
RBM39-220ENST00000455343 ACTN4O43707 911 aaKnown RBP6.98□□□□□ -1.29
RBM39-220ENST00000455343 SLC10A3P09131 477 aa6.98□□□□□ -1.29
RBM39-220ENST00000455343 CHMP7Q8WUX9 453 aaPredicted RBP6.97□□□□□ -1.29
RBM39-220ENST00000455343 PRKD2Q9BZL6 878 aa6.97□□□□□ -1.29
RBM39-220ENST00000455343 RAD54L2Q9Y4B4 1467 aa6.97□□□□□ -1.29
RBM39-220ENST00000455343 SOGA1O94964 1423 aa6.96□□□□□ -1.3
RBM39-220ENST00000455343 GPIHBP1Q8IV16 184 aa6.96□□□□□ -1.3
RBM39-220ENST00000455343 VSIG10Q8N0Z9 540 aa6.96□□□□□ -1.3
RBM39-220ENST00000455343 CHD1O14646 1710 aa6.96□□□□□ -1.3
RBM39-220ENST00000455343 TLL1O43897 1013 aa6.95□□□□□ -1.3
RBM39-220ENST00000455343 GGCXP38435 758 aa6.95□□□□□ -1.3
RBM39-220ENST00000455343 V9GY48 417 aaPredicted RBP6.95□□□□□ -1.3
RBM39-220ENST00000455343 SNAPC4Q5SXM2 1469 aa6.95□□□□□ -1.3
RBM39-220ENST00000455343 TMUB1Q9BVT8 246 aa6.94□□□□□ -1.3
RBM39-220ENST00000455343 PRDM2Q13029 1718 aa6.93□□□□□ -1.3
RBM39-220ENST00000455343 GAPVD1Q14C86 1478 aa6.93□□□□□ -1.3
RBM39-220ENST00000455343 MAGI1Q96QZ7 1491 aaPredicted RBP6.93□□□□□ -1.3
RBM39-220ENST00000455343 DAXXQ9UER7 740 aaPredicted RBP6.93□□□□□ -1.3
RBM39-220ENST00000455343 LAPTM4AQ15012 233 aa6.92□□□□□ -1.3
RBM39-220ENST00000455343 RSPH4AQ5TD94 716 aa6.92□□□□□ -1.3
RBM39-220ENST00000455343 NLRP7Q8WX94 980 aa6.92□□□□□ -1.3
RBM39-220ENST00000455343 SYNJ2O15056 1496 aa6.92□□□□□ -1.3
RBM39-220ENST00000455343 GRIN2BQ13224 1484 aa6.92□□□□□ -1.3
RBM39-220ENST00000455343 SYNJ1O43426 1573 aa6.91□□□□□ -1.3
RBM39-220ENST00000455343 RNF223E7ERA6 249 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms