RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 CEP170BQ9Y4F5 1589 aaPredicted RBP23.91■■□□□ 1.42
LINC00963-208ENST00000454968 KIAA1210Q9ULL0 1709 aa23.9■■□□□ 1.42
LINC00963-208ENST00000454968 NBPF8Q3BBV2 869 aa23.9■■□□□ 1.42
LINC00963-208ENST00000454968 TRPM1Q7Z4N2 1603 aa23.9■■□□□ 1.42
LINC00963-208ENST00000454968 SLIT1O75093 1534 aa23.88■■□□□ 1.41
LINC00963-208ENST00000454968 RALGAPBQ86X10 1494 aa23.88■■□□□ 1.41
LINC00963-208ENST00000454968 ARHGAP23Q9P227 1491 aa23.87■■□□□ 1.41
LINC00963-208ENST00000454968 CHGAP10645 457 aaKnown RBP23.84■■□□□ 1.41
LINC00963-208ENST00000454968 PIK3C2GO75747 1445 aa23.84■■□□□ 1.41
LINC00963-208ENST00000454968 TMEM2Q9UHN6 1383 aa23.84■■□□□ 1.41
LINC00963-208ENST00000454968 LAMC1P11047 1609 aa23.83■■□□□ 1.4
LINC00963-208ENST00000454968 ZNF326Q5BKZ1 582 aaKnown RBP23.82■■□□□ 1.4
LINC00963-208ENST00000454968 KDM2AQ9Y2K7 1162 aa23.82■■□□□ 1.4
LINC00963-208ENST00000454968 RIMS2Q9UQ26 1411 aa23.82■■□□□ 1.4
LINC00963-208ENST00000454968 GPRASP1Q5JY77 1395 aa23.81■■□□□ 1.4
LINC00963-208ENST00000454968 ADGRF5Q8IZF2 1346 aa23.81■■□□□ 1.4
LINC00963-208ENST00000454968 VGFO15240 615 aaPredicted RBP23.8■■□□□ 1.4
LINC00963-208ENST00000454968 STAG3Q9UJ98 1225 aa23.8■■□□□ 1.4
LINC00963-208ENST00000454968 SETBP1Q9Y6X0 1596 aa23.76■■□□□ 1.39
LINC00963-208ENST00000454968 THEMISQ8N1K5 641 aaPredicted RBP23.76■■□□□ 1.39
LINC00963-208ENST00000454968 NRXN3Q9Y4C0 1643 aa23.76■■□□□ 1.39
LINC00963-208ENST00000454968 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
LINC00963-208ENST00000454968 SETD1AO15047 1707 aaKnown RBP23.75■■□□□ 1.39
LINC00963-208ENST00000454968 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.75■■□□□ 1.39
LINC00963-208ENST00000454968 ADGRB1O14514 1584 aa23.72■■□□□ 1.39
LINC00963-208ENST00000454968 C14orf93Q9H972 538 aaKnown RBP23.72■■□□□ 1.39
LINC00963-208ENST00000454968 HDGFP51858 240 aaKnown RBP23.71■■□□□ 1.39
LINC00963-208ENST00000454968 IQGAP1P46940 1657 aa23.7■■□□□ 1.38
LINC00963-208ENST00000454968 ALKQ9UM73 1620 aa23.69■■□□□ 1.38
LINC00963-208ENST00000454968 SCAF11Q99590 1463 aaKnown RBP23.69■■□□□ 1.38
LINC00963-208ENST00000454968 PLEKHG1Q9ULL1 1385 aa23.69■■□□□ 1.38
LINC00963-208ENST00000454968 LTKP29376 864 aa23.68■■□□□ 1.38
LINC00963-208ENST00000454968 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
LINC00963-208ENST00000454968 ASXL1Q8IXJ9 1541 aa23.68■■□□□ 1.38
LINC00963-208ENST00000454968 NBPF1Q3BBV0 1214 aa23.67■■□□□ 1.38
LINC00963-208ENST00000454968 MED14O60244 1454 aa23.67■■□□□ 1.38
LINC00963-208ENST00000454968 POLR1AO95602 1720 aaPredicted RBP23.66■■□□□ 1.38
LINC00963-208ENST00000454968 LMTK3Q96Q04 1460 aa23.66■■□□□ 1.38
LINC00963-208ENST00000454968 CFAP70Q5T0N1 1121 aa23.66■■□□□ 1.38
LINC00963-208ENST00000454968 NUTM2DQ5VT03 806 aaPredicted RBP23.66■■□□□ 1.38
LINC00963-208ENST00000454968 ADAMTS13Q76LX8 1427 aa23.64■■□□□ 1.37
LINC00963-208ENST00000454968 TXNDC2Q86VQ3 553 aa23.63■■□□□ 1.37
LINC00963-208ENST00000454968 DIP2AQ14689 1571 aa23.63■■□□□ 1.37
LINC00963-208ENST00000454968 EID1Q9Y6B2 187 aa23.62■■□□□ 1.37
LINC00963-208ENST00000454968 CARD11Q9BXL7 1154 aa23.61■■□□□ 1.37
LINC00963-208ENST00000454968 USP47Q96K76 1375 aa23.6■■□□□ 1.37
LINC00963-208ENST00000454968 EIF4G2P78344 907 aaKnown RBP eCLIP23.59■■□□□ 1.371e-7■■■■□ 25.4
LINC00963-208ENST00000454968 ANKLE2Q86XL3 938 aa23.58■■□□□ 1.36
LINC00963-208ENST00000454968 KNDC1Q76NI1 1749 aa23.56■■□□□ 1.36
LINC00963-208ENST00000454968 ARHGEF28Q8N1W1 1705 aaKnown RBP23.56■■□□□ 1.36
LINC00963-208ENST00000454968 HSPA5P11021 654 aaKnown RBP23.55■■□□□ 1.36
LINC00963-208ENST00000454968 TBX22Q9Y458 520 aa23.53■■□□□ 1.36
LINC00963-208ENST00000454968 DLC1Q96QB1 1528 aa23.53■■□□□ 1.36
LINC00963-208ENST00000454968 TECPR2O15040 1411 aa23.52■■□□□ 1.36
LINC00963-208ENST00000454968 YTHDC2Q9H6S0 1430 aaKnown RBP23.52■■□□□ 1.36
LINC00963-208ENST00000454968 STRCQ7RTU9 1775 aa23.52■■□□□ 1.36
LINC00963-208ENST00000454968 ZNF316A6NFI3 1004 aaPredicted RBP23.51■■□□□ 1.35
LINC00963-208ENST00000454968 METP08581 1390 aa23.51■■□□□ 1.35
LINC00963-208ENST00000454968 LRPPRCP42704 1394 aaKnown RBP23.5■■□□□ 1.35
LINC00963-208ENST00000454968 PIK3R4Q99570 1358 aa23.5■■□□□ 1.35
LINC00963-208ENST00000454968 NPHP4O75161 1426 aaPredicted RBP23.5■■□□□ 1.35
LINC00963-208ENST00000454968 ABCC11Q96J66 1382 aa23.5■■□□□ 1.35
LINC00963-208ENST00000454968 TMEM132EQ6IEE7 984 aa23.5■■□□□ 1.35
LINC00963-208ENST00000454968 EIF3AQ14152 1382 aaKnown RBP23.48■■□□□ 1.35
LINC00963-208ENST00000454968 SBNO2Q9Y2G9 1366 aa23.48■■□□□ 1.35
LINC00963-208ENST00000454968 XRN1Q8IZH2 1706 aaKnown RBP23.48■■□□□ 1.35
LINC00963-208ENST00000454968 CPS1P31327 1500 aa23.47■■□□□ 1.35
LINC00963-208ENST00000454968 CHD2O14647 1828 aaKnown RBP23.47■■□□□ 1.35
LINC00963-208ENST00000454968 ST20-MTHFSA0A0A6YYL1 179 aa23.46■■□□□ 1.35
LINC00963-208ENST00000454968 TESK2Q96S53 571 aa23.46■■□□□ 1.35
LINC00963-208ENST00000454968 SIRT1Q96EB6 747 aa23.44■■□□□ 1.34
LINC00963-208ENST00000454968 PTPRUQ92729 1446 aa23.44■■□□□ 1.34
LINC00963-208ENST00000454968 QRICH2Q9H0J4 1663 aa23.44■■□□□ 1.34
LINC00963-208ENST00000454968 NCKAP5LQ9HCH0 1330 aa23.43■■□□□ 1.34
LINC00963-208ENST00000454968 HSPA2P54652 639 aa23.42■■□□□ 1.34
LINC00963-208ENST00000454968 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
LINC00963-208ENST00000454968 SLC26A8Q96RN1 970 aa23.42■■□□□ 1.34
LINC00963-208ENST00000454968 NWD1Q149M9 1564 aa23.41■■□□□ 1.34
LINC00963-208ENST00000454968 HIRIP3Q9BW71 556 aaPredicted RBP23.41■■□□□ 1.34
LINC00963-208ENST00000454968 PTCH1Q13635 1447 aa23.4■■□□□ 1.34
LINC00963-208ENST00000454968 TRAK1Q9UPV9 953 aa23.4■■□□□ 1.34
LINC00963-208ENST00000454968 BCANQ96GW7 911 aa23.38■■□□□ 1.33
LINC00963-208ENST00000454968 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
LINC00963-208ENST00000454968 CENPJQ9HC77 1338 aaPredicted RBP23.38■■□□□ 1.33
LINC00963-208ENST00000454968 SLC24A1O60721 1099 aa23.37■■□□□ 1.33
LINC00963-208ENST00000454968 C11orf95C9JLR9 678 aaPredicted RBP23.36■■□□□ 1.33
LINC00963-208ENST00000454968 ROBO2Q9HCK4 1378 aa23.34■■□□□ 1.33
LINC00963-208ENST00000454968 STK26Q9P289 416 aa23.33■■□□□ 1.33
LINC00963-208ENST00000454968 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.33
LINC00963-208ENST00000454968 CCDC7Q96M83 1385 aa23.33■■□□□ 1.33
LINC00963-208ENST00000454968 AMOTL2Q9Y2J4 779 aa23.32■■□□□ 1.32
LINC00963-208ENST00000454968 ADGRB2O60241 1585 aa23.32■■□□□ 1.32
LINC00963-208ENST00000454968 PRAM1Q96QH2 718 aa23.31■■□□□ 1.32
LINC00963-208ENST00000454968 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
LINC00963-208ENST00000454968 DISP3Q9P2K9 1392 aa23.31■■□□□ 1.32
LINC00963-208ENST00000454968 TULP4Q9NRJ4 1543 aa23.3■■□□□ 1.32
LINC00963-208ENST00000454968 PLEKHH1Q9ULM0 1364 aa23.3■■□□□ 1.32
LINC00963-208ENST00000454968 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.29■■□□□ 1.32
LINC00963-208ENST00000454968 STRCP1A6NGW2 1772 aa23.29■■□□□ 1.32
LINC00963-208ENST00000454968 TMF1P82094 1093 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms