RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.16
DDX39A-203ENST00000454233 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
DDX39A-203ENST00000454233 SLC26A8Q96RN1 970 aa16.07■□□□□ 0.16
DDX39A-203ENST00000454233 ZFYVE9O95405 1425 aa16.07■□□□□ 0.16
DDX39A-203ENST00000454233 MYO5BQ9ULV0 1848 aa16.07■□□□□ 0.16
DDX39A-203ENST00000454233 PIP4K2BP78356 416 aa16.06■□□□□ 0.16
DDX39A-203ENST00000454233 PLEKHG1Q9ULL1 1385 aa16.05■□□□□ 0.16
DDX39A-203ENST00000454233 KCNA6P17658 529 aa16.04■□□□□ 0.16
DDX39A-203ENST00000454233 SPHKAPQ2M3C7 1700 aa16.04■□□□□ 0.16
DDX39A-203ENST00000454233 SENP3Q9H4L4 574 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-203ENST00000454233 NUTM2DQ5VT03 806 aaPredicted RBP16.01■□□□□ 0.15
DDX39A-203ENST00000454233 ZNF326Q5BKZ1 582 aaKnown RBP16■□□□□ 0.15
DDX39A-203ENST00000454233 PROSER2Q86WR7 435 aaPredicted RBP16■□□□□ 0.15
DDX39A-203ENST00000454233 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
DDX39A-203ENST00000454233 TBX22Q9Y458 520 aa15.99■□□□□ 0.15
DDX39A-203ENST00000454233 NKTRP30414 1462 aaKnown RBP15.98■□□□□ 0.15
DDX39A-203ENST00000454233 TRPM2O94759 1503 aa15.98■□□□□ 0.15
DDX39A-203ENST00000454233 TMEM94Q12767 1356 aa15.98■□□□□ 0.15
DDX39A-203ENST00000454233 NWD1Q149M9 1564 aa15.97■□□□□ 0.15
DDX39A-203ENST00000454233 HSPA1LP34931 641 aa15.97■□□□□ 0.15
DDX39A-203ENST00000454233 ALKQ9UM73 1620 aa15.97■□□□□ 0.15
DDX39A-203ENST00000454233 CLTCL1P53675 1640 aa15.96■□□□□ 0.15
DDX39A-203ENST00000454233 DISP3Q9P2K9 1392 aa15.96■□□□□ 0.15
DDX39A-203ENST00000454233 DIP2AQ14689 1571 aa15.96■□□□□ 0.14
DDX39A-203ENST00000454233 XIRP1Q702N8 1843 aaKnown RBP15.95■□□□□ 0.14
DDX39A-203ENST00000454233 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
DDX39A-203ENST00000454233 PIK3R4Q99570 1358 aa15.94■□□□□ 0.14
DDX39A-203ENST00000454233 CHD2O14647 1828 aaKnown RBP15.94■□□□□ 0.14
DDX39A-203ENST00000454233 ACIN1Q9UKV3 1341 aaKnown RBP15.94■□□□□ 0.14
DDX39A-203ENST00000454233 RBM33Q96EV2 1170 aaKnown RBP15.93■□□□□ 0.14
DDX39A-203ENST00000454233 KIF1BO60333 1816 aa15.93■□□□□ 0.14
DDX39A-203ENST00000454233 MSH6P52701 1360 aa15.91■□□□□ 0.14
DDX39A-203ENST00000454233 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
DDX39A-203ENST00000454233 SETBP1Q9Y6X0 1596 aa15.89■□□□□ 0.13
DDX39A-203ENST00000454233 SETD5Q9C0A6 1442 aa15.89■□□□□ 0.13
DDX39A-203ENST00000454233 FOXD1Q16676 465 aa15.89■□□□□ 0.13
DDX39A-203ENST00000454233 C14orf37Q86TY3 774 aa15.89■□□□□ 0.13
DDX39A-203ENST00000454233 NEXMIFQ5QGS0 1516 aa15.89■□□□□ 0.13
DDX39A-203ENST00000454233 NCOA3Q9Y6Q9 1424 aa15.88■□□□□ 0.13
DDX39A-203ENST00000454233 VGFO15240 615 aaPredicted RBP15.88■□□□□ 0.13
DDX39A-203ENST00000454233 AMOTL2Q9Y2J4 779 aa15.88■□□□□ 0.13
DDX39A-203ENST00000454233 RPGRIP1LQ68CZ1 1315 aa15.88■□□□□ 0.13
DDX39A-203ENST00000454233 FAM135BQ49AJ0 1406 aa15.87■□□□□ 0.13
DDX39A-203ENST00000454233 CCDC144AA2RUR9 1427 aa15.86■□□□□ 0.13
DDX39A-203ENST00000454233 NRXN3Q9Y4C0 1643 aa15.86■□□□□ 0.13
DDX39A-203ENST00000454233 PTPRUQ92729 1446 aa15.85■□□□□ 0.13
DDX39A-203ENST00000454233 SLAIN2Q9P270 581 aa15.84■□□□□ 0.13
DDX39A-203ENST00000454233 C19orf44Q9H6X5 657 aa15.83■□□□□ 0.12
DDX39A-203ENST00000454233 METP08581 1390 aa15.83■□□□□ 0.12
DDX39A-203ENST00000454233 RAB3GAP2Q9H2M9 1393 aa15.83■□□□□ 0.12
DDX39A-203ENST00000454233 ATF3P18847 181 aa15.82■□□□□ 0.12
DDX39A-203ENST00000454233 CADPS2Q86UW7 1296 aa15.82■□□□□ 0.12
DDX39A-203ENST00000454233 ROBO1Q9Y6N7 1651 aa15.81■□□□□ 0.12
DDX39A-203ENST00000454233 XRN1Q8IZH2 1706 aaKnown RBP15.8■□□□□ 0.12
DDX39A-203ENST00000454233 MED1Q15648 1581 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-203ENST00000454233 RGL3Q3MIN7 710 aa15.8■□□□□ 0.12
DDX39A-203ENST00000454233 PPLO60437 1756 aa15.79■□□□□ 0.12
DDX39A-203ENST00000454233 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.78■□□□□ 0.12
DDX39A-203ENST00000454233 ILDR2Q71H61 639 aa15.78■□□□□ 0.12
DDX39A-203ENST00000454233 SPATA31E1Q6ZUB1 1445 aa15.77■□□□□ 0.12
DDX39A-203ENST00000454233 ANKRD30BQ9BXX2 1392 aa15.77■□□□□ 0.12
DDX39A-203ENST00000454233 PHF23Q9BUL5 403 aaPredicted RBP15.77■□□□□ 0.12
DDX39A-203ENST00000454233 DCCP43146 1447 aa15.77■□□□□ 0.11
DDX39A-203ENST00000454233 ADGRF5Q8IZF2 1346 aa15.74■□□□□ 0.11
DDX39A-203ENST00000454233 HRCP23327 699 aa15.74■□□□□ 0.11
DDX39A-203ENST00000454233 SETD1AO15047 1707 aaKnown RBP15.74■□□□□ 0.11
DDX39A-203ENST00000454233 PTCH1Q13635 1447 aa15.73■□□□□ 0.11
DDX39A-203ENST00000454233 ADGRL3Q9HAR2 1447 aa15.73■□□□□ 0.11
DDX39A-203ENST00000454233 PHLPP1O60346 1717 aa15.73■□□□□ 0.11
DDX39A-203ENST00000454233 IFT172Q9UG01 1749 aa15.71■□□□□ 0.1
DDX39A-203ENST00000454233 ROBO2Q9HCK4 1378 aa15.7■□□□□ 0.1
DDX39A-203ENST00000454233 PRAG1Q86YV5 1406 aa15.69■□□□□ 0.1
DDX39A-203ENST00000454233 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
DDX39A-203ENST00000454233 JCADQ9P266 1359 aa15.69■□□□□ 0.1
DDX39A-203ENST00000454233 MST1RQ04912 1400 aa15.68■□□□□ 0.1
DDX39A-203ENST00000454233 SOCS7O14512 581 aa15.68■□□□□ 0.1
DDX39A-203ENST00000454233 NALCNQ8IZF0 1738 aa15.68■□□□□ 0.1
DDX39A-203ENST00000454233 AHDC1Q5TGY3 1603 aaPredicted RBP15.68■□□□□ 0.1
DDX39A-203ENST00000454233 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
DDX39A-203ENST00000454233 STK26Q9P289 416 aa15.67■□□□□ 0.1
DDX39A-203ENST00000454233 COL16A1Q07092 1604 aaPredicted RBP15.66■□□□□ 0.1
DDX39A-203ENST00000454233 MYOM2P54296 1465 aa15.65■□□□□ 0.1
DDX39A-203ENST00000454233 LRPPRCP42704 1394 aaKnown RBP15.65■□□□□ 0.1
DDX39A-203ENST00000454233 ASXL1Q8IXJ9 1541 aa15.65■□□□□ 0.1
DDX39A-203ENST00000454233 TMEM132EQ6IEE7 984 aa15.65■□□□□ 0.1
DDX39A-203ENST00000454233 ABCC11Q96J66 1382 aa15.63■□□□□ 0.09
DDX39A-203ENST00000454233 TECPR2O15040 1411 aa15.63■□□□□ 0.09
DDX39A-203ENST00000454233 C14orf93Q9H972 538 aaKnown RBP15.63■□□□□ 0.09
DDX39A-203ENST00000454233 C1orf167Q5SNV9 1468 aa15.63■□□□□ 0.09
DDX39A-203ENST00000454233 SPATA31A6Q5VVP1 1343 aa15.63■□□□□ 0.09
DDX39A-203ENST00000454233 NRXN1Q9ULB1 1477 aa15.62■□□□□ 0.09
DDX39A-203ENST00000454233 DHX57Q6P158 1386 aaKnown RBP15.62■□□□□ 0.09
DDX39A-203ENST00000454233 YTHDC2Q9H6S0 1430 aaKnown RBP15.61■□□□□ 0.09
DDX39A-203ENST00000454233 CFAP70Q5T0N1 1121 aa15.61■□□□□ 0.09
DDX39A-203ENST00000454233 WAPLQ7Z5K2 1190 aa15.61■□□□□ 0.09
DDX39A-203ENST00000454233 LAMC1P11047 1609 aa15.61■□□□□ 0.09
DDX39A-203ENST00000454233 LRRC59Q96AG4 307 aaKnown RBP15.6■□□□□ 0.09
DDX39A-203ENST00000454233 STAC3Q96MF2 364 aa15.6■□□□□ 0.09
DDX39A-203ENST00000454233 KNDC1Q76NI1 1749 aa15.6■□□□□ 0.09
DDX39A-203ENST00000454233 NHSL1Q5SYE7 1610 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms