RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 SLFN5Q08AF3 891 aa20.49■□□□□ 0.87
TRA2B-205ENST00000453386 RTN4Q9NQC3 1192 aaKnown RBP20.49■□□□□ 0.87
TRA2B-205ENST00000453386 DUOX2Q9NRD8 1548 aa20.49■□□□□ 0.87
TRA2B-205ENST00000453386 APAF1O14727 1248 aa20.48■□□□□ 0.87
TRA2B-205ENST00000453386 NFKBIBQ15653 356 aa20.47■□□□□ 0.87
TRA2B-205ENST00000453386 C8orf34Q49A92 452 aa20.46■□□□□ 0.87
TRA2B-205ENST00000453386 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
TRA2B-205ENST00000453386 PLXNC1O60486 1568 aa20.46■□□□□ 0.87
TRA2B-205ENST00000453386 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.86
TRA2B-205ENST00000453386 BCAR3O75815 825 aa20.44■□□□□ 0.86
TRA2B-205ENST00000453386 SCAF11Q99590 1463 aaKnown RBP20.42■□□□□ 0.86
TRA2B-205ENST00000453386 GSE1Q14687 1217 aa20.42■□□□□ 0.86
TRA2B-205ENST00000453386 ASXL1Q8IXJ9 1541 aa20.42■□□□□ 0.86
TRA2B-205ENST00000453386 RNF17Q9BXT8 1623 aaKnown RBP20.41■□□□□ 0.86
TRA2B-205ENST00000453386 PIK3C2GO75747 1445 aa20.41■□□□□ 0.86
TRA2B-205ENST00000453386 SPAG9O60271 1321 aaKnown RBP20.4■□□□□ 0.86
TRA2B-205ENST00000453386 TRMT2AQ8IZ69 625 aaKnown RBP20.4■□□□□ 0.86
TRA2B-205ENST00000453386 AFAP1Q8N556 730 aa20.39■□□□□ 0.85
TRA2B-205ENST00000453386 TRAPPC8Q9Y2L5 1435 aa20.38■□□□□ 0.85
TRA2B-205ENST00000453386 E9PSI1 815 aa20.38■□□□□ 0.85
TRA2B-205ENST00000453386 EIF3AQ14152 1382 aaKnown RBP20.37■□□□□ 0.85
TRA2B-205ENST00000453386 STAC3Q96MF2 364 aa20.37■□□□□ 0.85
TRA2B-205ENST00000453386 MADDQ8WXG6 1647 aa20.37■□□□□ 0.85
TRA2B-205ENST00000453386 PLCH2O75038 1416 aa20.37■□□□□ 0.85
TRA2B-205ENST00000453386 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
TRA2B-205ENST00000453386 SYNMO15061 1565 aa20.36■□□□□ 0.85
TRA2B-205ENST00000453386 CANXP27824 592 aaKnown RBP20.36■□□□□ 0.85
TRA2B-205ENST00000453386 DMRT2Q9Y5R5 561 aa20.36■□□□□ 0.85
TRA2B-205ENST00000453386 CFAP70Q5T0N1 1121 aa20.35■□□□□ 0.85
TRA2B-205ENST00000453386 NPC1L1Q9UHC9 1359 aa20.35■□□□□ 0.85
TRA2B-205ENST00000453386 IGHDP01880 384 aa20.34■□□□□ 0.85
TRA2B-205ENST00000453386 SCAPERQ9BY12 1400 aa20.34■□□□□ 0.85
TRA2B-205ENST00000453386 IQGAP1P46940 1657 aa20.34■□□□□ 0.85
TRA2B-205ENST00000453386 FRAT1Q92837 279 aaPredicted RBP20.34■□□□□ 0.85
TRA2B-205ENST00000453386 BRPF3Q9ULD4 1205 aa20.34■□□□□ 0.85
TRA2B-205ENST00000453386 ANO8Q9HCE9 1232 aaPredicted RBP20.33■□□□□ 0.85
TRA2B-205ENST00000453386 ABCC2Q92887 1545 aa20.33■□□□□ 0.84
TRA2B-205ENST00000453386 FRAT2O75474 233 aaPredicted RBP20.32■□□□□ 0.84
TRA2B-205ENST00000453386 CARD14Q9BXL6 1004 aa20.32■□□□□ 0.84
TRA2B-205ENST00000453386 CLASP1Q7Z460 1538 aa20.31■□□□□ 0.84
TRA2B-205ENST00000453386 COG6Q9Y2V7 657 aa20.31■□□□□ 0.84
TRA2B-205ENST00000453386 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
TRA2B-205ENST00000453386 PANK1Q8TE04 598 aa20.31■□□□□ 0.84
TRA2B-205ENST00000453386 CENPJQ9HC77 1338 aaPredicted RBP20.3■□□□□ 0.84
TRA2B-205ENST00000453386 TRPM2O94759 1503 aa20.3■□□□□ 0.84
TRA2B-205ENST00000453386 CGNL1Q0VF96 1302 aa20.29■□□□□ 0.84
TRA2B-205ENST00000453386 KIF3BO15066 747 aa20.29■□□□□ 0.84
TRA2B-205ENST00000453386 TNNT2P45379 298 aaPredicted RBP20.29■□□□□ 0.84
TRA2B-205ENST00000453386 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
TRA2B-205ENST00000453386 PTPRTO14522 1441 aa20.29■□□□□ 0.84
TRA2B-205ENST00000453386 SLC24A1O60721 1099 aa20.28■□□□□ 0.84
TRA2B-205ENST00000453386 PDE3AQ14432 1141 aa20.28■□□□□ 0.84
TRA2B-205ENST00000453386 WWC1Q8IX03 1113 aa20.28■□□□□ 0.84
TRA2B-205ENST00000453386 CLUAP1Q96AJ1 413 aa20.28■□□□□ 0.84
TRA2B-205ENST00000453386 KANK1Q14678 1352 aa20.28■□□□□ 0.84
TRA2B-205ENST00000453386 ADGRF5Q8IZF2 1346 aa20.27■□□□□ 0.84
TRA2B-205ENST00000453386 NGEFQ8N5V2 710 aa20.27■□□□□ 0.83
TRA2B-205ENST00000453386 ABCC1P33527 1531 aa20.26■□□□□ 0.83
TRA2B-205ENST00000453386 CLTCL1P53675 1640 aa20.26■□□□□ 0.83
TRA2B-205ENST00000453386 SPHKAPQ2M3C7 1700 aa20.26■□□□□ 0.83
TRA2B-205ENST00000453386 RRP7AQ9Y3A4 280 aaKnown RBP20.25■□□□□ 0.83
TRA2B-205ENST00000453386 MYOM1P52179 1685 aa20.24■□□□□ 0.83
TRA2B-205ENST00000453386 CHD1O14646 1710 aa20.23■□□□□ 0.83
TRA2B-205ENST00000453386 SEC24BO95487 1268 aa20.23■□□□□ 0.83
TRA2B-205ENST00000453386 MORC1Q86VD1 984 aa20.23■□□□□ 0.83
TRA2B-205ENST00000453386 ERVK-7P63135 1459 aa20.23■□□□□ 0.83
TRA2B-205ENST00000453386 KDM5AP29375 1690 aaKnown RBP20.23■□□□□ 0.83
TRA2B-205ENST00000453386 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
TRA2B-205ENST00000453386 RTEL1-TNFRSF6BF6WH68 1400 aa20.22■□□□□ 0.83
TRA2B-205ENST00000453386 CEP152O94986 1710 aa20.21■□□□□ 0.83
TRA2B-205ENST00000453386 USP19O94966 1318 aa20.21■□□□□ 0.83
TRA2B-205ENST00000453386 CHGAP10645 457 aaKnown RBP20.21■□□□□ 0.83
TRA2B-205ENST00000453386 BCL2L13Q9BXK5 485 aa20.19■□□□□ 0.82
TRA2B-205ENST00000453386 SHROOM2Q13796 1616 aa20.19■□□□□ 0.82
TRA2B-205ENST00000453386 POLR3AO14802 1390 aaPredicted RBP20.19■□□□□ 0.82
TRA2B-205ENST00000453386 BECN1Q14457 450 aa20.18■□□□□ 0.82
TRA2B-205ENST00000453386 TCP11L2Q8N4U5 519 aa20.18■□□□□ 0.82
TRA2B-205ENST00000453386 RARSP54136 660 aaKnown RBP20.18■□□□□ 0.82
TRA2B-205ENST00000453386 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
TRA2B-205ENST00000453386 TRAK1Q9UPV9 953 aa20.18■□□□□ 0.82
TRA2B-205ENST00000453386 NINLQ9Y2I6 1382 aa20.18■□□□□ 0.82
TRA2B-205ENST00000453386 ZFYVE16Q7Z3T8 1539 aa20.17■□□□□ 0.82
TRA2B-205ENST00000453386 SLKQ9H2G2 1235 aaPredicted RBP20.17■□□□□ 0.82
TRA2B-205ENST00000453386 SLC12A5Q9H2X9 1139 aa20.17■□□□□ 0.82
TRA2B-205ENST00000453386 UGGT1Q9NYU2 1555 aa20.16■□□□□ 0.82
TRA2B-205ENST00000453386 ZCCHC11Q5TAX3 1644 aaKnown RBP20.16■□□□□ 0.82
TRA2B-205ENST00000453386 PMFBP1Q8TBY8 1022 aa20.15■□□□□ 0.82
TRA2B-205ENST00000453386 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.15■□□□□ 0.82
TRA2B-205ENST00000453386 TNNQ9UQP3 1299 aa20.15■□□□□ 0.82
TRA2B-205ENST00000453386 NSD3Q9BZ95 1437 aa20.15■□□□□ 0.82
TRA2B-205ENST00000453386 PCDHB15Q9Y5E8 787 aa20.15■□□□□ 0.82
TRA2B-205ENST00000453386 RLBP1P12271 317 aa20.14■□□□□ 0.82
TRA2B-205ENST00000453386 TET3O43151 1660 aa20.14■□□□□ 0.81
TRA2B-205ENST00000453386 UPF2Q9HAU5 1272 aaKnown RBP20.13■□□□□ 0.81
TRA2B-205ENST00000453386 MTHFSP49914 203 aa20.12■□□□□ 0.81
TRA2B-205ENST00000453386 KIAA1210Q9ULL0 1709 aa20.11■□□□□ 0.81
TRA2B-205ENST00000453386 PDZRN3Q9UPQ7 1066 aa20.11■□□□□ 0.81
TRA2B-205ENST00000453386 MAP3K4Q9Y6R4 1608 aa20.11■□□□□ 0.81
TRA2B-205ENST00000453386 ABCA6Q8N139 1617 aa20.11■□□□□ 0.81
TRA2B-205ENST00000453386 MYOM2P54296 1465 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 252.5 ms