RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 CCDC141Q6ZP82 1450 aa14.5□□□□□ -0.09
DDR1-239ENST00000452441 TTC37Q6PGP7 1564 aa14.49□□□□□ -0.09
DDR1-239ENST00000452441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.49□□□□□ -0.09
DDR1-239ENST00000452441 SLKQ9H2G2 1235 aaPredicted RBP14.49□□□□□ -0.09
DDR1-239ENST00000452441 LMOD2Q6P5Q4 547 aa14.49□□□□□ -0.09
DDR1-239ENST00000452441 ARHGEF12Q9NZN5 1544 aa14.49□□□□□ -0.09
DDR1-239ENST00000452441 FAM69CQ0P6D2 419 aa14.48□□□□□ -0.09
DDR1-239ENST00000452441 U2AF1L5P0DN76 240 aaPredicted RBP14.48□□□□□ -0.09
DDR1-239ENST00000452441 U2AF1Q01081 240 aaKnown RBP eCLIP14.48□□□□□ -0.09
DDR1-239ENST00000452441 GOLGA2Q08379 1002 aa14.48□□□□□ -0.09
DDR1-239ENST00000452441 COG6Q9Y2V7 657 aa14.48□□□□□ -0.09
DDR1-239ENST00000452441 MINK1Q8N4C8 1332 aaPredicted RBP14.48□□□□□ -0.09
DDR1-239ENST00000452441 ARHGEF5Q12774 1597 aa14.47□□□□□ -0.09
DDR1-239ENST00000452441 TCERG1O14776 1098 aaKnown RBP14.46□□□□□ -0.09
DDR1-239ENST00000452441 BCAR3O75815 825 aa14.46□□□□□ -0.09
DDR1-239ENST00000452441 CFAP53Q96M91 514 aa14.46□□□□□ -0.09
DDR1-239ENST00000452441 LRPPRCP42704 1394 aaKnown RBP14.46□□□□□ -0.09
DDR1-239ENST00000452441 PRAG1Q86YV5 1406 aa14.46□□□□□ -0.09
DDR1-239ENST00000452441 PREX2Q70Z35 1606 aa14.46□□□□□ -0.1
DDR1-239ENST00000452441 ELL2O00472 640 aaPredicted RBP14.44□□□□□ -0.1
DDR1-239ENST00000452441 DISP3Q9P2K9 1392 aa14.44□□□□□ -0.1
DDR1-239ENST00000452441 A2MP01023 1474 aa14.44□□□□□ -0.1
DDR1-239ENST00000452441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.44□□□□□ -0.16e-7■■■■□ 21.9
DDR1-239ENST00000452441 PANK1Q8TE04 598 aa14.43□□□□□ -0.1
DDR1-239ENST00000452441 SLC12A5Q9H2X9 1139 aa14.43□□□□□ -0.1
DDR1-239ENST00000452441 CHD1O14646 1710 aa14.43□□□□□ -0.1
DDR1-239ENST00000452441 FTSJ3Q8IY81 847 aaKnown RBP14.43□□□□□ -0.1
DDR1-239ENST00000452441 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
DDR1-239ENST00000452441 CABP2Q9NPB3 220 aa14.42□□□□□ -0.1
DDR1-239ENST00000452441 TRPM1Q7Z4N2 1603 aa14.42□□□□□ -0.1
DDR1-239ENST00000452441 PER1O15534 1290 aaPredicted RBP14.41□□□□□ -0.1
DDR1-239ENST00000452441 TESK2Q96S53 571 aa14.41□□□□□ -0.1
DDR1-239ENST00000452441 E9PCH4 1651 aa14.41□□□□□ -0.1
DDR1-239ENST00000452441 PPP2R1AP30153 589 aa14.41□□□□□ -0.1
DDR1-239ENST00000452441 TRAPPC8Q9Y2L5 1435 aa14.41□□□□□ -0.1
DDR1-239ENST00000452441 ADGRF5Q8IZF2 1346 aa14.4□□□□□ -0.1
DDR1-239ENST00000452441 APBB1O00213 710 aa14.4□□□□□ -0.1
DDR1-239ENST00000452441 TPRNQ4KMQ1 711 aa14.4□□□□□ -0.11
DDR1-239ENST00000452441 BACH2Q9BYV9 841 aa14.39□□□□□ -0.11
DDR1-239ENST00000452441 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.39□□□□□ -0.11
DDR1-239ENST00000452441 MAPK8IP3Q9UPT6 1336 aa14.39□□□□□ -0.11
DDR1-239ENST00000452441 HSP90AA1P07900 732 aaKnown RBP14.39□□□□□ -0.11
DDR1-239ENST00000452441 EIF3AQ14152 1382 aaKnown RBP14.38□□□□□ -0.11
DDR1-239ENST00000452441 PARD3Q8TEW0 1356 aa14.38□□□□□ -0.11
DDR1-239ENST00000452441 UPF2Q9HAU5 1272 aaKnown RBP14.38□□□□□ -0.11
DDR1-239ENST00000452441 CENPJQ9HC77 1338 aaPredicted RBP14.38□□□□□ -0.11
DDR1-239ENST00000452441 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
DDR1-239ENST00000452441 GZF1Q9H116 711 aaPredicted RBP14.37□□□□□ -0.11
DDR1-239ENST00000452441 UNC13BO14795 1591 aa14.36□□□□□ -0.11
DDR1-239ENST00000452441 ERBINQ96RT1 1412 aa14.35□□□□□ -0.11
DDR1-239ENST00000452441 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
DDR1-239ENST00000452441 COL17A1Q9UMD9 1497 aaPredicted RBP14.34□□□□□ -0.11
DDR1-239ENST00000452441 MS4A1P11836 297 aa14.34□□□□□ -0.11
DDR1-239ENST00000452441 FBLN1P23142 703 aa14.34□□□□□ -0.11
DDR1-239ENST00000452441 MYO5CQ9NQX4 1742 aa14.34□□□□□ -0.11
DDR1-239ENST00000452441 GPRASP1Q5JY77 1395 aa14.34□□□□□ -0.11
DDR1-239ENST00000452441 A0A0G2JS52 829 aa14.33□□□□□ -0.12
DDR1-239ENST00000452441 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
DDR1-239ENST00000452441 ITPRIPQ8IWB1 547 aa14.33□□□□□ -0.12
DDR1-239ENST00000452441 ABCC2Q92887 1545 aa14.32□□□□□ -0.12
DDR1-239ENST00000452441 ADGRL1O94910 1474 aa14.32□□□□□ -0.12
DDR1-239ENST00000452441 MTHFSP49914 203 aa14.32□□□□□ -0.12
DDR1-239ENST00000452441 FBXO31Q5XUX0 539 aaPredicted RBP14.32□□□□□ -0.12
DDR1-239ENST00000452441 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
DDR1-239ENST00000452441 IL27Q8NEV9 243 aa14.32□□□□□ -0.12
DDR1-239ENST00000452441 PRDM15P57071 1507 aaPredicted RBP14.32□□□□□ -0.12
DDR1-239ENST00000452441 IQGAP3Q86VI3 1631 aa14.32□□□□□ -0.12
DDR1-239ENST00000452441 FANCAO15360 1455 aa14.31□□□□□ -0.12
DDR1-239ENST00000452441 MAST1Q9Y2H9 1570 aa14.31□□□□□ -0.12
DDR1-239ENST00000452441 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
DDR1-239ENST00000452441 TSR2Q969E8 191 aaKnown RBP14.31□□□□□ -0.12
DDR1-239ENST00000452441 MFAP1P55081 439 aaKnown RBP14.3□□□□□ -0.12
DDR1-239ENST00000452441 LTV1Q96GA3 475 aaPredicted RBP14.3□□□□□ -0.12
DDR1-239ENST00000452441 PLCH2O75038 1416 aa14.3□□□□□ -0.12
DDR1-239ENST00000452441 HDGFL2Q7Z4V5 671 aaPredicted RBP14.3□□□□□ -0.12
DDR1-239ENST00000452441 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
DDR1-239ENST00000452441 SMC4Q9NTJ3 1288 aa14.3□□□□□ -0.12
DDR1-239ENST00000452441 CD109Q6YHK3 1445 aa14.29□□□□□ -0.12
DDR1-239ENST00000452441 PLXNC1O60486 1568 aa14.29□□□□□ -0.12
DDR1-239ENST00000452441 MAGI2Q86UL8 1455 aa14.28□□□□□ -0.12
DDR1-239ENST00000452441 DUOX2Q9NRD8 1548 aa14.28□□□□□ -0.12
DDR1-239ENST00000452441 TCP11L2Q8N4U5 519 aa14.28□□□□□ -0.12
DDR1-239ENST00000452441 EVC2Q86UK5 1308 aa14.28□□□□□ -0.12
DDR1-239ENST00000452441 PRAM1Q96QH2 718 aa14.28□□□□□ -0.12
DDR1-239ENST00000452441 TNNQ9UQP3 1299 aa14.28□□□□□ -0.12
DDR1-239ENST00000452441 CFAP65Q6ZU64 1925 aaKnown RBP14.28□□□□□ -0.12
DDR1-239ENST00000452441 NUTM2GQ5VZR2 741 aa14.27□□□□□ -0.12
DDR1-239ENST00000452441 HMOX1P09601 288 aa14.27□□□□□ -0.13
DDR1-239ENST00000452441 RBM33Q96EV2 1170 aaKnown RBP14.27□□□□□ -0.13
DDR1-239ENST00000452441 ZCCHC11Q5TAX3 1644 aaKnown RBP14.27□□□□□ -0.13
DDR1-239ENST00000452441 IDI1Q13907 227 aa14.26□□□□□ -0.13
DDR1-239ENST00000452441 CGNL1Q0VF96 1302 aa14.26□□□□□ -0.13
DDR1-239ENST00000452441 DMRT2Q9Y5R5 561 aa14.26□□□□□ -0.13
DDR1-239ENST00000452441 ASXL2Q76L83 1435 aa14.25□□□□□ -0.13
DDR1-239ENST00000452441 TERF2IPQ9NYB0 399 aa14.25□□□□□ -0.13
DDR1-239ENST00000452441 ABCC1P33527 1531 aa14.24□□□□□ -0.13
DDR1-239ENST00000452441 WDR7Q9Y4E6 1490 aa14.24□□□□□ -0.13
DDR1-239ENST00000452441 FAM161AQ3B820 660 aa14.24□□□□□ -0.13
DDR1-239ENST00000452441 CENPQQ7L2Z9 268 aaPredicted RBP14.24□□□□□ -0.13
DDR1-239ENST00000452441 DUSP27Q5VZP5 1158 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms