RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 ESF1Q9H501 851 aaKnown RBP19.92■□□□□ 0.78
USP39-207ENST00000450066 KIAA1210Q9ULL0 1709 aa19.92■□□□□ 0.78
USP39-207ENST00000450066 ST20-MTHFSA0A0A6YYL1 179 aa19.91■□□□□ 0.78
USP39-207ENST00000450066 KIF7Q2M1P5 1343 aa19.91■□□□□ 0.78
USP39-207ENST00000450066 ADGRF5Q8IZF2 1346 aa19.9■□□□□ 0.78
USP39-207ENST00000450066 SPATA31D1Q6ZQQ2 1576 aa19.9■□□□□ 0.78
USP39-207ENST00000450066 PPLO60437 1756 aa19.9■□□□□ 0.78
USP39-207ENST00000450066 ZMYM3Q14202 1370 aa19.89■□□□□ 0.77
USP39-207ENST00000450066 TMEM131LA2VDJ0 1609 aa19.87■□□□□ 0.77
USP39-207ENST00000450066 NEXMIFQ5QGS0 1516 aa19.85■□□□□ 0.77
USP39-207ENST00000450066 PIK3C2GO75747 1445 aa19.85■□□□□ 0.77
USP39-207ENST00000450066 SCAF11Q99590 1463 aaKnown RBP19.84■□□□□ 0.77
USP39-207ENST00000450066 IQGAP1P46940 1657 aa19.84■□□□□ 0.77
USP39-207ENST00000450066 VGFO15240 615 aaPredicted RBP19.83■□□□□ 0.77
USP39-207ENST00000450066 CFAP70Q5T0N1 1121 aa19.83■□□□□ 0.76
USP39-207ENST00000450066 ZFYVE9O95405 1425 aa19.83■□□□□ 0.76
USP39-207ENST00000450066 ANP32CO43423 234 aa19.8■□□□□ 0.76
USP39-207ENST00000450066 TESK2Q96S53 571 aa19.8■□□□□ 0.76
USP39-207ENST00000450066 MYO5BQ9ULV0 1848 aa19.8■□□□□ 0.76
USP39-207ENST00000450066 SETBP1Q9Y6X0 1596 aa19.8■□□□□ 0.76
USP39-207ENST00000450066 C14orf93Q9H972 538 aaKnown RBP19.8■□□□□ 0.76
USP39-207ENST00000450066 EIF3AQ14152 1382 aaKnown RBP19.78■□□□□ 0.76
USP39-207ENST00000450066 STAG3Q9UJ98 1225 aa19.77■□□□□ 0.76
USP39-207ENST00000450066 A2ML1A8K2U0 1454 aa19.76■□□□□ 0.75
USP39-207ENST00000450066 TNRQ92752 1358 aa19.76■□□□□ 0.75
USP39-207ENST00000450066 ADGRB1O14514 1584 aa19.74■□□□□ 0.75
USP39-207ENST00000450066 NUTM2DQ5VT03 806 aaPredicted RBP19.74■□□□□ 0.75
USP39-207ENST00000450066 POLR3GLQ9BT43 218 aa19.74■□□□□ 0.75
USP39-207ENST00000450066 TMF1P82094 1093 aa19.73■□□□□ 0.75
USP39-207ENST00000450066 FER1L4A9Z1Z3 1794 aa19.72■□□□□ 0.75
USP39-207ENST00000450066 DISP3Q9P2K9 1392 aa19.71■□□□□ 0.75
USP39-207ENST00000450066 CCER2I3L3R5 266 aa19.71■□□□□ 0.75
USP39-207ENST00000450066 SLC24A1O60721 1099 aa19.71■□□□□ 0.75
USP39-207ENST00000450066 KDM5AP29375 1690 aaKnown RBP19.71■□□□□ 0.75
USP39-207ENST00000450066 C3P01024 1663 aa19.69■□□□□ 0.74
USP39-207ENST00000450066 RIMS2Q9UQ26 1411 aa19.68■□□□□ 0.74
USP39-207ENST00000450066 MYO3AQ8NEV4 1616 aa19.68■□□□□ 0.74
USP39-207ENST00000450066 NLRP1Q9C000 1473 aa19.68■□□□□ 0.74
USP39-207ENST00000450066 CEBPAP49715 358 aaPredicted RBP19.67■□□□□ 0.74
USP39-207ENST00000450066 CDCA8Q53HL2 280 aa19.66■□□□□ 0.74
USP39-207ENST00000450066 TMEM132EQ6IEE7 984 aa19.66■□□□□ 0.74
USP39-207ENST00000450066 SBNO2Q9Y2G9 1366 aa19.66■□□□□ 0.74
USP39-207ENST00000450066 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.66■□□□□ 0.74
USP39-207ENST00000450066 UBR1Q8IWV7 1749 aa19.64■□□□□ 0.74
USP39-207ENST00000450066 PRKRIP1Q9H875 184 aaPredicted RBP19.64■□□□□ 0.73
USP39-207ENST00000450066 TRAK1Q9UPV9 953 aa19.64■□□□□ 0.73
USP39-207ENST00000450066 CENPJQ9HC77 1338 aaPredicted RBP19.64■□□□□ 0.73
USP39-207ENST00000450066 HDGFP51858 240 aaKnown RBP19.63■□□□□ 0.73
USP39-207ENST00000450066 YTHDC1Q96MU7 727 aaKnown RBP19.63■□□□□ 0.73
USP39-207ENST00000450066 ALKQ9UM73 1620 aa19.62■□□□□ 0.73
USP39-207ENST00000450066 ASXL1Q8IXJ9 1541 aa19.61■□□□□ 0.73
USP39-207ENST00000450066 TMEM2Q9UHN6 1383 aa19.61■□□□□ 0.73
USP39-207ENST00000450066 ARHGEF28Q8N1W1 1705 aaKnown RBP19.58■□□□□ 0.73
USP39-207ENST00000450066 CENPBP07199 599 aaPredicted RBP19.58■□□□□ 0.73
USP39-207ENST00000450066 ADAMTSL3P82987 1691 aa19.58■□□□□ 0.72
USP39-207ENST00000450066 QRICH2Q9H0J4 1663 aa19.57■□□□□ 0.72
USP39-207ENST00000450066 YTHDC2Q9H6S0 1430 aaKnown RBP19.57■□□□□ 0.72
USP39-207ENST00000450066 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
USP39-207ENST00000450066 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
USP39-207ENST00000450066 PTPRMP28827 1452 aa19.55■□□□□ 0.72
USP39-207ENST00000450066 PER1O15534 1290 aaPredicted RBP19.55■□□□□ 0.72
USP39-207ENST00000450066 NRXN3Q9Y4C0 1643 aa19.54■□□□□ 0.72
USP39-207ENST00000450066 SETD1AO15047 1707 aaKnown RBP19.54■□□□□ 0.72
USP39-207ENST00000450066 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
USP39-207ENST00000450066 PANK3Q9H999 370 aa19.54■□□□□ 0.72
USP39-207ENST00000450066 STK26Q9P289 416 aa19.53■□□□□ 0.72
USP39-207ENST00000450066 KTN1Q86UP2 1357 aaKnown RBP19.53■□□□□ 0.72
USP39-207ENST00000450066 SLIT1O75093 1534 aa19.52■□□□□ 0.72
USP39-207ENST00000450066 ARHGAP23Q9P227 1491 aa19.51■□□□□ 0.71
USP39-207ENST00000450066 THEMISQ8N1K5 641 aaPredicted RBP19.51■□□□□ 0.71
USP39-207ENST00000450066 MYOM1P52179 1685 aa19.51■□□□□ 0.71
USP39-207ENST00000450066 LRPPRCP42704 1394 aaKnown RBP19.5■□□□□ 0.71
USP39-207ENST00000450066 PLEKHG1Q9ULL1 1385 aa19.5■□□□□ 0.71
USP39-207ENST00000450066 PUS7Q96PZ0 661 aaKnown RBP19.5■□□□□ 0.71
USP39-207ENST00000450066 DLC1Q96QB1 1528 aa19.5■□□□□ 0.71
USP39-207ENST00000450066 LTKP29376 864 aa19.49■□□□□ 0.71
USP39-207ENST00000450066 EID1Q9Y6B2 187 aa19.49■□□□□ 0.71
USP39-207ENST00000450066 ABCC11Q96J66 1382 aa19.49■□□□□ 0.71
USP39-207ENST00000450066 RALBP1Q15311 655 aa19.48■□□□□ 0.71
USP39-207ENST00000450066 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
USP39-207ENST00000450066 TXNDC2Q86VQ3 553 aa19.48■□□□□ 0.71
USP39-207ENST00000450066 PRAM1Q96QH2 718 aa19.47■□□□□ 0.71
USP39-207ENST00000450066 METP08581 1390 aa19.47■□□□□ 0.71
USP39-207ENST00000450066 CEP170BQ9Y4F5 1589 aaPredicted RBP19.46■□□□□ 0.71
USP39-207ENST00000450066 TULP4Q9NRJ4 1543 aa19.46■□□□□ 0.71
USP39-207ENST00000450066 POGKQ9P215 609 aa19.46■□□□□ 0.71
USP39-207ENST00000450066 BCANQ96GW7 911 aa19.45■□□□□ 0.7
USP39-207ENST00000450066 ADAMTS13Q76LX8 1427 aa19.45■□□□□ 0.7
USP39-207ENST00000450066 CNGB1Q14028 1251 aaPredicted RBP19.45■□□□□ 0.7
USP39-207ENST00000450066 CCDC184Q52MB2 194 aa19.45■□□□□ 0.7
USP39-207ENST00000450066 PARD3Q8TEW0 1356 aa19.45■□□□□ 0.7
USP39-207ENST00000450066 MRS2Q9HD23 443 aa19.44■□□□□ 0.7
USP39-207ENST00000450066 SAFB2Q14151 953 aaKnown RBP eCLIP19.44■□□□□ 0.7
USP39-207ENST00000450066 KNSTRNQ9Y448 316 aa19.44■□□□□ 0.7
USP39-207ENST00000450066 MED14O60244 1454 aa19.42■□□□□ 0.7
USP39-207ENST00000450066 TECPR2O15040 1411 aa19.42■□□□□ 0.7
USP39-207ENST00000450066 MYBBP1AQ9BQG0 1328 aaKnown RBP19.42■□□□□ 0.7
USP39-207ENST00000450066 SIRT1Q96EB6 747 aa19.42■□□□□ 0.7
USP39-207ENST00000450066 ZNF142P52746 1687 aaPredicted RBP19.42■□□□□ 0.7
USP39-207ENST00000450066 KNDC1Q76NI1 1749 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms