RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 EIF3AQ14152 1382 aaKnown RBP13.47□□□□□ -0.25
RFC4-210ENST00000449502 PREX1Q8TCU6 1659 aa13.47□□□□□ -0.25
RFC4-210ENST00000449502 C14orf93Q9H972 538 aaKnown RBP13.47□□□□□ -0.25
RFC4-210ENST00000449502 BCANQ96GW7 911 aa13.46□□□□□ -0.25
RFC4-210ENST00000449502 KIF1BO60333 1816 aa13.46□□□□□ -0.26
RFC4-210ENST00000449502 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
RFC4-210ENST00000449502 PIK3C2BO00750 1634 aa13.45□□□□□ -0.26
RFC4-210ENST00000449502 NLRP1Q9C000 1473 aa13.44□□□□□ -0.26
RFC4-210ENST00000449502 TMF1P82094 1093 aa13.44□□□□□ -0.26
RFC4-210ENST00000449502 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
RFC4-210ENST00000449502 RIMS2Q9UQ26 1411 aa13.44□□□□□ -0.26
RFC4-210ENST00000449502 CCDC7Q96M83 1385 aa13.44□□□□□ -0.26
RFC4-210ENST00000449502 A2ML1A8K2U0 1454 aa13.43□□□□□ -0.26
RFC4-210ENST00000449502 SCAF11Q99590 1463 aaKnown RBP13.43□□□□□ -0.26
RFC4-210ENST00000449502 MADDQ8WXG6 1647 aa13.43□□□□□ -0.26
RFC4-210ENST00000449502 EID1Q9Y6B2 187 aa13.43□□□□□ -0.26
RFC4-210ENST00000449502 NRXN1Q9ULB1 1477 aa13.42□□□□□ -0.26
RFC4-210ENST00000449502 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
RFC4-210ENST00000449502 PIK3C2GO75747 1445 aa13.42□□□□□ -0.26
RFC4-210ENST00000449502 CDCA8Q53HL2 280 aa13.42□□□□□ -0.26
RFC4-210ENST00000449502 THEMISQ8N1K5 641 aaPredicted RBP13.42□□□□□ -0.26
RFC4-210ENST00000449502 TRPM1Q7Z4N2 1603 aa13.42□□□□□ -0.26
RFC4-210ENST00000449502 KIF7Q2M1P5 1343 aa13.41□□□□□ -0.26
RFC4-210ENST00000449502 MROH2AA6NES4 1674 aa13.41□□□□□ -0.26
RFC4-210ENST00000449502 ANP32CO43423 234 aa13.41□□□□□ -0.26
RFC4-210ENST00000449502 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
RFC4-210ENST00000449502 NEXMIFQ5QGS0 1516 aa13.4□□□□□ -0.26
RFC4-210ENST00000449502 TRAK1Q9UPV9 953 aa13.4□□□□□ -0.26
RFC4-210ENST00000449502 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
RFC4-210ENST00000449502 C11orf95C9JLR9 678 aaPredicted RBP13.39□□□□□ -0.27
RFC4-210ENST00000449502 TMEM132EQ6IEE7 984 aa13.39□□□□□ -0.27
RFC4-210ENST00000449502 TXNDC2Q86VQ3 553 aa13.39□□□□□ -0.27
RFC4-210ENST00000449502 TMEM2Q9UHN6 1383 aa13.39□□□□□ -0.27
RFC4-210ENST00000449502 CFAP65Q6ZU64 1925 aaKnown RBP13.39□□□□□ -0.27
RFC4-210ENST00000449502 MIER1Q8N108 512 aa13.38□□□□□ -0.27
RFC4-210ENST00000449502 LAMC1P11047 1609 aa13.38□□□□□ -0.27
RFC4-210ENST00000449502 STK26Q9P289 416 aa13.37□□□□□ -0.27
RFC4-210ENST00000449502 FER1L4A9Z1Z3 1794 aa13.37□□□□□ -0.27
RFC4-210ENST00000449502 CENPJQ9HC77 1338 aaPredicted RBP13.37□□□□□ -0.27
RFC4-210ENST00000449502 TESK2Q96S53 571 aa13.35□□□□□ -0.27
RFC4-210ENST00000449502 POGKQ9P215 609 aa13.35□□□□□ -0.27
RFC4-210ENST00000449502 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.27
RFC4-210ENST00000449502 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
RFC4-210ENST00000449502 PPLO60437 1756 aa13.33□□□□□ -0.28
RFC4-210ENST00000449502 C3P01024 1663 aa13.32□□□□□ -0.28
RFC4-210ENST00000449502 ANKLE2Q86XL3 938 aa13.32□□□□□ -0.28
RFC4-210ENST00000449502 IFT172Q9UG01 1749 aa13.32□□□□□ -0.28
RFC4-210ENST00000449502 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
RFC4-210ENST00000449502 PLEKHG1Q9ULL1 1385 aa13.31□□□□□ -0.28
RFC4-210ENST00000449502 ADAMTSL3P82987 1691 aa13.31□□□□□ -0.28
RFC4-210ENST00000449502 LTKP29376 864 aa13.3□□□□□ -0.28
RFC4-210ENST00000449502 DISP3Q9P2K9 1392 aa13.3□□□□□ -0.28
RFC4-210ENST00000449502 YTHDC2Q9H6S0 1430 aaKnown RBP13.3□□□□□ -0.28
RFC4-210ENST00000449502 PTPRMP28827 1452 aa13.29□□□□□ -0.28
RFC4-210ENST00000449502 SAFB2Q14151 953 aaKnown RBP eCLIP13.29□□□□□ -0.28
RFC4-210ENST00000449502 PRAM1Q96QH2 718 aa13.29□□□□□ -0.28
RFC4-210ENST00000449502 EVC2Q86UK5 1308 aa13.29□□□□□ -0.28
RFC4-210ENST00000449502 LRPPRCP42704 1394 aaKnown RBP13.29□□□□□ -0.28
RFC4-210ENST00000449502 ADGRB1O14514 1584 aa13.28□□□□□ -0.28
RFC4-210ENST00000449502 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
RFC4-210ENST00000449502 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
RFC4-210ENST00000449502 SBNO2Q9Y2G9 1366 aa13.27□□□□□ -0.29
RFC4-210ENST00000449502 SLIT1O75093 1534 aa13.26□□□□□ -0.29
RFC4-210ENST00000449502 ABCC11Q96J66 1382 aa13.26□□□□□ -0.29
RFC4-210ENST00000449502 SLC26A8Q96RN1 970 aa13.26□□□□□ -0.29
RFC4-210ENST00000449502 ARHGAP23Q9P227 1491 aa13.26□□□□□ -0.29
RFC4-210ENST00000449502 TBX22Q9Y458 520 aa13.26□□□□□ -0.29
RFC4-210ENST00000449502 IQGAP1P46940 1657 aa13.25□□□□□ -0.29
RFC4-210ENST00000449502 MYO3AQ8NEV4 1616 aa13.25□□□□□ -0.29
RFC4-210ENST00000449502 CEP170BQ9Y4F5 1589 aaPredicted RBP13.25□□□□□ -0.29
RFC4-210ENST00000449502 PANK3Q9H999 370 aa13.25□□□□□ -0.29
RFC4-210ENST00000449502 UBR1Q8IWV7 1749 aa13.25□□□□□ -0.29
RFC4-210ENST00000449502 METP08581 1390 aa13.24□□□□□ -0.29
RFC4-210ENST00000449502 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
RFC4-210ENST00000449502 SRPK2P78362 688 aaKnown RBP13.24□□□□□ -0.29
RFC4-210ENST00000449502 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
RFC4-210ENST00000449502 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
RFC4-210ENST00000449502 SIRT1Q96EB6 747 aa13.24□□□□□ -0.29
RFC4-210ENST00000449502 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
RFC4-210ENST00000449502 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
RFC4-210ENST00000449502 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
RFC4-210ENST00000449502 WAPLQ7Z5K2 1190 aa13.22□□□□□ -0.29
RFC4-210ENST00000449502 MYO5BQ9ULV0 1848 aa13.22□□□□□ -0.29
RFC4-210ENST00000449502 ADAMTS13Q76LX8 1427 aa13.22□□□□□ -0.29
RFC4-210ENST00000449502 ASXL1Q8IXJ9 1541 aa13.21□□□□□ -0.29
RFC4-210ENST00000449502 RALBP1Q15311 655 aa13.2□□□□□ -0.3
RFC4-210ENST00000449502 PRKRIP1Q9H875 184 aaPredicted RBP13.2□□□□□ -0.3
RFC4-210ENST00000449502 CABP2Q9NPB3 220 aa13.2□□□□□ -0.3
RFC4-210ENST00000449502 AMOTL2Q9Y2J4 779 aa13.2□□□□□ -0.3
RFC4-210ENST00000449502 DLC1Q96QB1 1528 aa13.19□□□□□ -0.3
RFC4-210ENST00000449502 KDM4FA0A1W2PPD8 638 aa13.19□□□□□ -0.3
RFC4-210ENST00000449502 YTHDC1Q96MU7 727 aaKnown RBP13.19□□□□□ -0.3
RFC4-210ENST00000449502 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
RFC4-210ENST00000449502 FAM135BQ49AJ0 1406 aa13.19□□□□□ -0.3
RFC4-210ENST00000449502 ATAD2Q6PL18 1390 aa13.19□□□□□ -0.3
RFC4-210ENST00000449502 KTN1Q86UP2 1357 aaKnown RBP13.19□□□□□ -0.3
RFC4-210ENST00000449502 PIK3R4Q99570 1358 aa13.18□□□□□ -0.3
RFC4-210ENST00000449502 NCKAP5LQ9HCH0 1330 aa13.17□□□□□ -0.3
RFC4-210ENST00000449502 TECPR2O15040 1411 aa13.16□□□□□ -0.3
RFC4-210ENST00000449502 NPHP4O75161 1426 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms