RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 TSPY4P0CV99 314 aa11.87□□□□□ -0.51
RBM39-218ENST00000449489 TSPY10P0CW01 314 aa11.87□□□□□ -0.51
RBM39-218ENST00000449489 CFAP65Q6ZU64 1925 aaKnown RBP11.87□□□□□ -0.51
RBM39-218ENST00000449489 ARHGEF5Q12774 1597 aa11.87□□□□□ -0.51
RBM39-218ENST00000449489 ARHGAP31Q2M1Z3 1444 aa11.86□□□□□ -0.51
RBM39-218ENST00000449489 EHBP1L1Q8N3D4 1523 aa11.86□□□□□ -0.51
RBM39-218ENST00000449489 ZNF772Q68DY9 489 aaPredicted RBP11.86□□□□□ -0.51
RBM39-218ENST00000449489 EIF2AK4Q9P2K8 1649 aaKnown RBP11.86□□□□□ -0.51
RBM39-218ENST00000449489 MAP3K1Q13233 1512 aa11.86□□□□□ -0.51
RBM39-218ENST00000449489 SPATA31A6Q5VVP1 1343 aa11.85□□□□□ -0.51
RBM39-218ENST00000449489 KDM5AP29375 1690 aaKnown RBP11.84□□□□□ -0.51
RBM39-218ENST00000449489 TMEM2Q9UHN6 1383 aa11.84□□□□□ -0.51
RBM39-218ENST00000449489 PROM2Q8N271 834 aa11.84□□□□□ -0.51
RBM39-218ENST00000449489 SLAIN2Q9P270 581 aa11.84□□□□□ -0.51
RBM39-218ENST00000449489 PRDM15P57071 1507 aaPredicted RBP11.84□□□□□ -0.51
RBM39-218ENST00000449489 FGD6Q6ZV73 1430 aa11.84□□□□□ -0.51
RBM39-218ENST00000449489 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
RBM39-218ENST00000449489 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
RBM39-218ENST00000449489 PROSER2Q86WR7 435 aaPredicted RBP11.83□□□□□ -0.52
RBM39-218ENST00000449489 TET3O43151 1660 aa11.83□□□□□ -0.52
RBM39-218ENST00000449489 PHLPP1O60346 1717 aa11.83□□□□□ -0.52
RBM39-218ENST00000449489 MROH1Q8NDA8 1641 aa11.82□□□□□ -0.52
RBM39-218ENST00000449489 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
RBM39-218ENST00000449489 MSH6P52701 1360 aa11.81□□□□□ -0.52
RBM39-218ENST00000449489 NWD1Q149M9 1564 aa11.8□□□□□ -0.52
RBM39-218ENST00000449489 COL16A1Q07092 1604 aaPredicted RBP11.8□□□□□ -0.52
RBM39-218ENST00000449489 NCOA3Q9Y6Q9 1424 aa11.79□□□□□ -0.52
RBM39-218ENST00000449489 RXRBP28702 533 aa11.79□□□□□ -0.52
RBM39-218ENST00000449489 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
RBM39-218ENST00000449489 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
RBM39-218ENST00000449489 CEP152O94986 1710 aa11.79□□□□□ -0.52
RBM39-218ENST00000449489 EP400Q96L91 3159 aa11.79□□□□□ -0.52
RBM39-218ENST00000449489 PIK3C2BO00750 1634 aa11.78□□□□□ -0.52
RBM39-218ENST00000449489 LRP6O75581 1613 aa11.78□□□□□ -0.52
RBM39-218ENST00000449489 EFCAB6Q5THR3 1501 aa11.77□□□□□ -0.52
RBM39-218ENST00000449489 DUOX2Q9NRD8 1548 aa11.76□□□□□ -0.53
RBM39-218ENST00000449489 SHPRHQ149N8 1683 aa11.76□□□□□ -0.53
RBM39-218ENST00000449489 TRIM52Q96A61 297 aa11.76□□□□□ -0.53
RBM39-218ENST00000449489 SLC26A8Q96RN1 970 aa11.76□□□□□ -0.53
RBM39-218ENST00000449489 MEX3CQ5U5Q3 659 aaKnown RBP11.75□□□□□ -0.53
RBM39-218ENST00000449489 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
RBM39-218ENST00000449489 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
RBM39-218ENST00000449489 CHD2O14647 1828 aaKnown RBP11.74□□□□□ -0.53
RBM39-218ENST00000449489 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
RBM39-218ENST00000449489 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
RBM39-218ENST00000449489 IDI1Q13907 227 aa11.74□□□□□ -0.53
RBM39-218ENST00000449489 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
RBM39-218ENST00000449489 RBM33Q96EV2 1170 aaKnown RBP11.74□□□□□ -0.53
RBM39-218ENST00000449489 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
RBM39-218ENST00000449489 ERBINQ96RT1 1412 aa11.72□□□□□ -0.53
RBM39-218ENST00000449489 CADPS2Q86UW7 1296 aa11.72□□□□□ -0.53
RBM39-218ENST00000449489 LMTK2Q8IWU2 1503 aa11.71□□□□□ -0.53
RBM39-218ENST00000449489 SLC52A1Q9NWF4 448 aa11.71□□□□□ -0.53
RBM39-218ENST00000449489 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
RBM39-218ENST00000449489 C19orf44Q9H6X5 657 aa11.7□□□□□ -0.54
RBM39-218ENST00000449489 TBX22Q9Y458 520 aa11.7□□□□□ -0.54
RBM39-218ENST00000449489 NOS1P29475 1434 aa11.69□□□□□ -0.54
RBM39-218ENST00000449489 MYOM3Q5VTT5 1437 aa11.69□□□□□ -0.54
RBM39-218ENST00000449489 KANK1Q14678 1352 aa11.69□□□□□ -0.54
RBM39-218ENST00000449489 PLEKHG1Q9ULL1 1385 aa11.69□□□□□ -0.54
RBM39-218ENST00000449489 HDGFP51858 240 aaKnown RBP11.69□□□□□ -0.54
RBM39-218ENST00000449489 RBM6P78332 1123 aaKnown RBP11.69□□□□□ -0.54
RBM39-218ENST00000449489 DIP2AQ14689 1571 aa11.69□□□□□ -0.54
RBM39-218ENST00000449489 ADGRB3O60242 1522 aa11.69□□□□□ -0.54
RBM39-218ENST00000449489 AFF2P51816 1311 aa11.68□□□□□ -0.54
RBM39-218ENST00000449489 PIK3R4Q99570 1358 aa11.67□□□□□ -0.54
RBM39-218ENST00000449489 KIF15Q9NS87 1388 aa11.67□□□□□ -0.54
RBM39-218ENST00000449489 ZFYVE9O95405 1425 aa11.67□□□□□ -0.54
RBM39-218ENST00000449489 SETD5Q9C0A6 1442 aa11.67□□□□□ -0.54
RBM39-218ENST00000449489 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
RBM39-218ENST00000449489 ATF3P18847 181 aa11.66□□□□□ -0.54
RBM39-218ENST00000449489 RGS12O14924 1447 aa11.66□□□□□ -0.54
RBM39-218ENST00000449489 VASPP50552 380 aaPredicted RBP11.65□□□□□ -0.54
RBM39-218ENST00000449489 BCANQ96GW7 911 aa11.65□□□□□ -0.54
RBM39-218ENST00000449489 QTRT2Q9H974 415 aaKnown RBP11.65□□□□□ -0.54
RBM39-218ENST00000449489 ZRANB1Q9UGI0 708 aa11.65□□□□□ -0.54
RBM39-218ENST00000449489 DCCP43146 1447 aa11.64□□□□□ -0.55
RBM39-218ENST00000449489 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
RBM39-218ENST00000449489 NGLY1Q96IV0 654 aa11.64□□□□□ -0.55
RBM39-218ENST00000449489 ATAD2Q6PL18 1390 aa11.64□□□□□ -0.55
RBM39-218ENST00000449489 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
RBM39-218ENST00000449489 LRRC59Q96AG4 307 aaKnown RBP11.63□□□□□ -0.55
RBM39-218ENST00000449489 RPRD2Q5VT52 1461 aaKnown RBP11.63□□□□□ -0.55
RBM39-218ENST00000449489 NUTM2BA6NNL0 878 aaPredicted RBP11.62□□□□□ -0.55
RBM39-218ENST00000449489 NUTM2EB1AL46 878 aaPredicted RBP11.62□□□□□ -0.55
RBM39-218ENST00000449489 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
RBM39-218ENST00000449489 NUTM2AQ8IVF1 878 aaPredicted RBP11.62□□□□□ -0.55
RBM39-218ENST00000449489 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.62□□□□□ -0.55
RBM39-218ENST00000449489 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
RBM39-218ENST00000449489 RIMS2Q9UQ26 1411 aa11.61□□□□□ -0.55
RBM39-218ENST00000449489 NUTM2DQ5VT03 806 aaPredicted RBP11.61□□□□□ -0.55
RBM39-218ENST00000449489 REM2Q8IYK8 340 aaPredicted RBP11.61□□□□□ -0.55
RBM39-218ENST00000449489 RRP7BPQ9NSQ0 103 aa11.61□□□□□ -0.55
RBM39-218ENST00000449489 ABCC5O15440 1437 aa11.6□□□□□ -0.55
RBM39-218ENST00000449489 ADAMTS13Q76LX8 1427 aa11.6□□□□□ -0.55
RBM39-218ENST00000449489 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
RBM39-218ENST00000449489 NHSL1Q5SYE7 1610 aa11.6□□□□□ -0.55
RBM39-218ENST00000449489 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
RBM39-218ENST00000449489 MYO5BQ9ULV0 1848 aa11.59□□□□□ -0.55
RBM39-218ENST00000449489 C8orf37Q96NL8 207 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms