RNA–Protein interactions for RNA: ENST00000448764.5

SRRT-204, Transcript of serrate, RNA effector molecule, humanhuman

TSL 5

Gene SRRT, Length 1,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-204ENST00000448764 USP47Q96K76 1375 aa23.91■■□□□ 1.42
SRRT-204ENST00000448764 CHGAP10645 457 aaKnown RBP23.9■■□□□ 1.42
SRRT-204ENST00000448764 POLR1AO95602 1720 aaPredicted RBP23.9■■□□□ 1.42
SRRT-204ENST00000448764 CARD11Q9BXL7 1154 aa23.89■■□□□ 1.42
SRRT-204ENST00000448764 ZFYVE9O95405 1425 aa23.88■■□□□ 1.41
SRRT-204ENST00000448764 TNRQ92752 1358 aa23.86■■□□□ 1.41
SRRT-204ENST00000448764 ADAMTSL3P82987 1691 aa23.85■■□□□ 1.41
SRRT-204ENST00000448764 PIK3C2GO75747 1445 aa23.85■■□□□ 1.41
SRRT-204ENST00000448764 IQGAP1P46940 1657 aa23.84■■□□□ 1.41
SRRT-204ENST00000448764 SETBP1Q9Y6X0 1596 aa23.83■■□□□ 1.41
SRRT-204ENST00000448764 HIRIP3Q9BW71 556 aaPredicted RBP23.83■■□□□ 1.41
SRRT-204ENST00000448764 A2ML1A8K2U0 1454 aa23.83■■□□□ 1.4
SRRT-204ENST00000448764 NLRP1Q9C000 1473 aa23.83■■□□□ 1.4
SRRT-204ENST00000448764 VGFO15240 615 aaPredicted RBP23.81■■□□□ 1.4
SRRT-204ENST00000448764 ADGRF5Q8IZF2 1346 aa23.81■■□□□ 1.4
SRRT-204ENST00000448764 RIMS1Q86UR5 1692 aaKnown RBP23.81■■□□□ 1.4
SRRT-204ENST00000448764 NBPF1Q3BBV0 1214 aa23.8■■□□□ 1.4
SRRT-204ENST00000448764 UBR1Q8IWV7 1749 aa23.79■■□□□ 1.4
SRRT-204ENST00000448764 STAG3Q9UJ98 1225 aa23.78■■□□□ 1.4
SRRT-204ENST00000448764 SCAF11Q99590 1463 aaKnown RBP23.77■■□□□ 1.39
SRRT-204ENST00000448764 C14orf93Q9H972 538 aaKnown RBP23.73■■□□□ 1.39
SRRT-204ENST00000448764 MYO3AQ8NEV4 1616 aa23.73■■□□□ 1.39
SRRT-204ENST00000448764 EIF3AQ14152 1382 aaKnown RBP23.72■■□□□ 1.39
SRRT-204ENST00000448764 CCDC7Q96M83 1385 aa23.72■■□□□ 1.39
SRRT-204ENST00000448764 ADGRB1O14514 1584 aa23.72■■□□□ 1.39
SRRT-204ENST00000448764 WASHC2AQ641Q2 1341 aa23.71■■□□□ 1.39
SRRT-204ENST00000448764 RIMS2Q9UQ26 1411 aa23.71■■□□□ 1.39
SRRT-204ENST00000448764 CFAP70Q5T0N1 1121 aa23.7■■□□□ 1.39
SRRT-204ENST00000448764 ST20-MTHFSA0A0A6YYL1 179 aa23.7■■□□□ 1.38
SRRT-204ENST00000448764 CEBPAP49715 358 aaPredicted RBP23.69■■□□□ 1.38
SRRT-204ENST00000448764 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.68■■□□□ 1.38
SRRT-204ENST00000448764 HDGFP51858 240 aaKnown RBP23.66■■□□□ 1.38
SRRT-204ENST00000448764 DDX10Q13206 875 aaKnown RBP23.66■■□□□ 1.38
SRRT-204ENST00000448764 KIF7Q2M1P5 1343 aa23.65■■□□□ 1.38
SRRT-204ENST00000448764 TMEM2Q9UHN6 1383 aa23.65■■□□□ 1.38
SRRT-204ENST00000448764 ZNF142P52746 1687 aaPredicted RBP23.64■■□□□ 1.38
SRRT-204ENST00000448764 C11orf95C9JLR9 678 aaPredicted RBP23.64■■□□□ 1.38
SRRT-204ENST00000448764 SLIT1O75093 1534 aa23.63■■□□□ 1.37
SRRT-204ENST00000448764 ALKQ9UM73 1620 aa23.63■■□□□ 1.37
SRRT-204ENST00000448764 CEP170BQ9Y4F5 1589 aaPredicted RBP23.62■■□□□ 1.37
SRRT-204ENST00000448764 NUTM2DQ5VT03 806 aaPredicted RBP23.62■■□□□ 1.37
SRRT-204ENST00000448764 SETD1AO15047 1707 aaKnown RBP23.61■■□□□ 1.37
SRRT-204ENST00000448764 SLC24A1O60721 1099 aa23.61■■□□□ 1.37
SRRT-204ENST00000448764 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
SRRT-204ENST00000448764 ARHGAP23Q9P227 1491 aa23.61■■□□□ 1.37
SRRT-204ENST00000448764 TESK2Q96S53 571 aa23.6■■□□□ 1.37
SRRT-204ENST00000448764 SETD1BQ9UPS6 1966 aaKnown RBP23.6■■□□□ 1.37
SRRT-204ENST00000448764 NRXN3Q9Y4C0 1643 aa23.6■■□□□ 1.37
SRRT-204ENST00000448764 SBNO2Q9Y2G9 1366 aa23.59■■□□□ 1.37
SRRT-204ENST00000448764 ARHGEF28Q8N1W1 1705 aaKnown RBP23.59■■□□□ 1.37
SRRT-204ENST00000448764 AEBP2Q6ZN18 517 aaPredicted RBP23.56■■□□□ 1.36
SRRT-204ENST00000448764 PTPRMP28827 1452 aa23.56■■□□□ 1.36
SRRT-204ENST00000448764 TMF1P82094 1093 aa23.55■■□□□ 1.36
SRRT-204ENST00000448764 THEMISQ8N1K5 641 aaPredicted RBP23.55■■□□□ 1.36
SRRT-204ENST00000448764 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
SRRT-204ENST00000448764 PLEKHG1Q9ULL1 1385 aa23.53■■□□□ 1.36
SRRT-204ENST00000448764 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
SRRT-204ENST00000448764 TMEM132EQ6IEE7 984 aa23.51■■□□□ 1.35
SRRT-204ENST00000448764 MIER1Q8N108 512 aa23.51■■□□□ 1.35
SRRT-204ENST00000448764 DISP3Q9P2K9 1392 aa23.51■■□□□ 1.35
SRRT-204ENST00000448764 CENPJQ9HC77 1338 aaPredicted RBP23.51■■□□□ 1.35
SRRT-204ENST00000448764 YTHDC2Q9H6S0 1430 aaKnown RBP23.51■■□□□ 1.35
SRRT-204ENST00000448764 CDCA8Q53HL2 280 aa23.51■■□□□ 1.35
SRRT-204ENST00000448764 DLC1Q96QB1 1528 aa23.5■■□□□ 1.35
SRRT-204ENST00000448764 EID1Q9Y6B2 187 aa23.5■■□□□ 1.35
SRRT-204ENST00000448764 KNDC1Q76NI1 1749 aa23.49■■□□□ 1.35
SRRT-204ENST00000448764 DIP2AQ14689 1571 aa23.48■■□□□ 1.35
SRRT-204ENST00000448764 TRAK1Q9UPV9 953 aa23.48■■□□□ 1.35
SRRT-204ENST00000448764 LRPPRCP42704 1394 aaKnown RBP23.46■■□□□ 1.35
SRRT-204ENST00000448764 TXNDC2Q86VQ3 553 aa23.45■■□□□ 1.34
SRRT-204ENST00000448764 ADAMTS13Q76LX8 1427 aa23.45■■□□□ 1.34
SRRT-204ENST00000448764 MED14O60244 1454 aa23.45■■□□□ 1.34
SRRT-204ENST00000448764 LTKP29376 864 aa23.44■■□□□ 1.34
SRRT-204ENST00000448764 ANP32CO43423 234 aa23.44■■□□□ 1.34
SRRT-204ENST00000448764 POLR3GLQ9BT43 218 aa23.43■■□□□ 1.34
SRRT-204ENST00000448764 ABCC11Q96J66 1382 aa23.43■■□□□ 1.34
SRRT-204ENST00000448764 TECPR2O15040 1411 aa23.42■■□□□ 1.34
SRRT-204ENST00000448764 MYOM1P52179 1685 aa23.41■■□□□ 1.34
SRRT-204ENST00000448764 CPS1P31327 1500 aa23.41■■□□□ 1.34
SRRT-204ENST00000448764 METP08581 1390 aa23.39■■□□□ 1.34
SRRT-204ENST00000448764 BCANQ96GW7 911 aa23.37■■□□□ 1.33
SRRT-204ENST00000448764 PUS7Q96PZ0 661 aaKnown RBP23.37■■□□□ 1.33
SRRT-204ENST00000448764 STK26Q9P289 416 aa23.37■■□□□ 1.33
SRRT-204ENST00000448764 FAM135BQ49AJ0 1406 aa23.36■■□□□ 1.33
SRRT-204ENST00000448764 SIRT1Q96EB6 747 aa23.36■■□□□ 1.33
SRRT-204ENST00000448764 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
SRRT-204ENST00000448764 TULP4Q9NRJ4 1543 aa23.35■■□□□ 1.33
SRRT-204ENST00000448764 TBX22Q9Y458 520 aa23.35■■□□□ 1.33
SRRT-204ENST00000448764 ANKLE2Q86XL3 938 aa23.33■■□□□ 1.33
SRRT-204ENST00000448764 EVC2Q86UK5 1308 aa23.33■■□□□ 1.33
SRRT-204ENST00000448764 PRAM1Q96QH2 718 aa23.33■■□□□ 1.32
SRRT-204ENST00000448764 CCER2I3L3R5 266 aa23.32■■□□□ 1.32
SRRT-204ENST00000448764 POGKQ9P215 609 aa23.32■■□□□ 1.32
SRRT-204ENST00000448764 PIK3R4Q99570 1358 aa23.32■■□□□ 1.32
SRRT-204ENST00000448764 XRN1Q8IZH2 1706 aaKnown RBP23.29■■□□□ 1.32
SRRT-204ENST00000448764 KTN1Q86UP2 1357 aaKnown RBP23.28■■□□□ 1.32
SRRT-204ENST00000448764 PTCH1Q13635 1447 aa23.27■■□□□ 1.32
SRRT-204ENST00000448764 PRKRIP1Q9H875 184 aaPredicted RBP23.27■■□□□ 1.32
SRRT-204ENST00000448764 SLC26A8Q96RN1 970 aa23.26■■□□□ 1.31
SRRT-204ENST00000448764 ADGRB2O60241 1585 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms