RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 BCL2L12Q9HB09 334 aa9.64□□□□□ -0.87
SDCBP-205ENST00000447267 ADAMTS12P58397 1594 aa9.63□□□□□ -0.87
SDCBP-205ENST00000447267 CFAP44Q96MT7 982 aa9.63□□□□□ -0.87
SDCBP-205ENST00000447267 LTBP4Q8N2S1 1624 aa9.63□□□□□ -0.87
SDCBP-205ENST00000447267 MAP3K4Q9Y6R4 1608 aa9.63□□□□□ -0.87
SDCBP-205ENST00000447267 TK2O00142 265 aa9.62□□□□□ -0.87
SDCBP-205ENST00000447267 DPYSL4O14531 572 aa9.62□□□□□ -0.87
SDCBP-205ENST00000447267 RAPGEF3O95398 923 aa9.62□□□□□ -0.87
SDCBP-205ENST00000447267 PCDHGA10Q9Y5H3 936 aa9.62□□□□□ -0.87
SDCBP-205ENST00000447267 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
SDCBP-205ENST00000447267 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.61□□□□□ -0.87
SDCBP-205ENST00000447267 ABCA5Q8WWZ7 1642 aa9.6□□□□□ -0.87
SDCBP-205ENST00000447267 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
SDCBP-205ENST00000447267 ABCA10Q8WWZ4 1543 aa9.6□□□□□ -0.87
SDCBP-205ENST00000447267 CEBPAP49715 358 aaPredicted RBP9.59□□□□□ -0.87
SDCBP-205ENST00000447267 MLECQ14165 292 aa9.59□□□□□ -0.87
SDCBP-205ENST00000447267 CD109Q6YHK3 1445 aa9.58□□□□□ -0.88
SDCBP-205ENST00000447267 POTEAQ6S8J7 498 aa9.58□□□□□ -0.88
SDCBP-205ENST00000447267 ZDHHC16Q969W1 377 aa9.58□□□□□ -0.88
SDCBP-205ENST00000447267 IQSEC2Q5JU85 1478 aa9.58□□□□□ -0.88
SDCBP-205ENST00000447267 RIMS1Q86UR5 1692 aaKnown RBP9.58□□□□□ -0.88
SDCBP-205ENST00000447267 PTPRTO14522 1441 aa9.57□□□□□ -0.88
SDCBP-205ENST00000447267 BCORL1Q5H9F3 1711 aa9.57□□□□□ -0.88
SDCBP-205ENST00000447267 KIAA0586Q9BVV6 1533 aa9.56□□□□□ -0.88
SDCBP-205ENST00000447267 ZBED2Q9BTP6 218 aa9.56□□□□□ -0.88
SDCBP-205ENST00000447267 ZNF335Q9H4Z2 1342 aaPredicted RBP9.56□□□□□ -0.88
SDCBP-205ENST00000447267 COL9A1P20849 921 aa9.55□□□□□ -0.88
SDCBP-205ENST00000447267 STRCQ7RTU9 1775 aa9.55□□□□□ -0.88
SDCBP-205ENST00000447267 PTPREP23469 700 aa9.54□□□□□ -0.88
SDCBP-205ENST00000447267 SLC4A5Q9BY07 1137 aa9.54□□□□□ -0.88
SDCBP-205ENST00000447267 BHMG1C9JSJ3 638 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-205ENST00000447267 IFFO2Q5TF58 517 aa9.53□□□□□ -0.88
SDCBP-205ENST00000447267 MAGI3Q5TCQ9 1506 aa9.52□□□□□ -0.88
SDCBP-205ENST00000447267 PHF14O94880 888 aa9.51□□□□□ -0.89
SDCBP-205ENST00000447267 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
SDCBP-205ENST00000447267 PDIA6Q15084 440 aa9.51□□□□□ -0.89
SDCBP-205ENST00000447267 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
SDCBP-205ENST00000447267 TSHZ2Q9NRE2 1034 aa9.51□□□□□ -0.89
SDCBP-205ENST00000447267 CUL7Q14999 1698 aa9.51□□□□□ -0.89
SDCBP-205ENST00000447267 RUSC2Q8N2Y8 1516 aa9.51□□□□□ -0.89
SDCBP-205ENST00000447267 TNIKQ9UKE5 1360 aa9.5□□□□□ -0.89
SDCBP-205ENST00000447267 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
SDCBP-205ENST00000447267 DDX12PQ92771 950 aa9.5□□□□□ -0.89
SDCBP-205ENST00000447267 UACAQ9BZF9 1416 aa9.49□□□□□ -0.89
SDCBP-205ENST00000447267 KCTD12Q96CX2 325 aaKnown RBP9.49□□□□□ -0.89
SDCBP-205ENST00000447267 ARAP3Q8WWN8 1544 aa9.48□□□□□ -0.89
SDCBP-205ENST00000447267 PPP1R3GB7ZBB8 358 aa9.48□□□□□ -0.89
SDCBP-205ENST00000447267 E2F4Q16254 413 aa9.48□□□□□ -0.89
SDCBP-205ENST00000447267 UHRF1BP1LA0JNW5 1464 aa9.47□□□□□ -0.89
SDCBP-205ENST00000447267 FBXW7Q969H0 707 aa9.47□□□□□ -0.89
SDCBP-205ENST00000447267 KDM5BQ9UGL1 1544 aa9.46□□□□□ -0.89
SDCBP-205ENST00000447267 TOM1O60784 492 aa9.46□□□□□ -0.9
SDCBP-205ENST00000447267 C6orf132Q5T0Z8 1188 aa9.46□□□□□ -0.9
SDCBP-205ENST00000447267 RBM33Q96EV2 1170 aaKnown RBP9.46□□□□□ -0.9
SDCBP-205ENST00000447267 ARIH1Q9Y4X5 557 aaPredicted RBP9.46□□□□□ -0.9
SDCBP-205ENST00000447267 EPAS1Q99814 870 aa9.45□□□□□ -0.9
SDCBP-205ENST00000447267 WDR7Q9Y4E6 1490 aa9.45□□□□□ -0.9
SDCBP-205ENST00000447267 HCSTQ9UBK5 93 aa9.44□□□□□ -0.9
SDCBP-205ENST00000447267 UHRF1BP1Q6BDS2 1440 aa9.43□□□□□ -0.9
SDCBP-205ENST00000447267 TSR1Q2NL82 804 aaKnown RBP9.43□□□□□ -0.9
SDCBP-205ENST00000447267 SRCAPQ6ZRS2 3230 aa9.43□□□□□ -0.9
SDCBP-205ENST00000447267 NBR1Q14596 966 aa9.42□□□□□ -0.9
SDCBP-205ENST00000447267 CFAP43Q8NDM7 1665 aa9.42□□□□□ -0.9
SDCBP-205ENST00000447267 WRNQ14191 1432 aaPredicted RBP eCLIP9.41□□□□□ -0.9
SDCBP-205ENST00000447267 SPDYE16A6NNV3 312 aaPredicted RBP9.41□□□□□ -0.9
SDCBP-205ENST00000447267 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
SDCBP-205ENST00000447267 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
SDCBP-205ENST00000447267 POGZQ7Z3K3 1410 aa9.4□□□□□ -0.9
SDCBP-205ENST00000447267 WDR70Q9NW82 654 aa9.4□□□□□ -0.9
SDCBP-205ENST00000447267 RABGEF1Q9UJ41 708 aa9.4□□□□□ -0.9
SDCBP-205ENST00000447267 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
SDCBP-205ENST00000447267 MRPL50Q8N5N7 158 aaKnown RBP9.39□□□□□ -0.91
SDCBP-205ENST00000447267 CARMIL2Q6F5E8 1435 aa9.39□□□□□ -0.91
SDCBP-205ENST00000447267 ZCCHC11Q5TAX3 1644 aaKnown RBP9.38□□□□□ -0.91
SDCBP-205ENST00000447267 PTPN5P54829 565 aa9.38□□□□□ -0.91
SDCBP-205ENST00000447267 STAC3Q96MF2 364 aa9.38□□□□□ -0.91
SDCBP-205ENST00000447267 KIAA1468Q9P260 1216 aa9.38□□□□□ -0.91
SDCBP-205ENST00000447267 SETD1AO15047 1707 aaKnown RBP9.37□□□□□ -0.91
SDCBP-205ENST00000447267 PREX1Q8TCU6 1659 aa9.37□□□□□ -0.91
SDCBP-205ENST00000447267 GRXCR2A6NFK2 248 aa9.37□□□□□ -0.91
SDCBP-205ENST00000447267 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
SDCBP-205ENST00000447267 OSBPP22059 807 aa9.37□□□□□ -0.91
SDCBP-205ENST00000447267 KCNV2Q8TDN2 545 aa9.37□□□□□ -0.91
SDCBP-205ENST00000447267 PLA2G2EQ9NZK7 142 aa9.37□□□□□ -0.91
SDCBP-205ENST00000447267 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
SDCBP-205ENST00000447267 TRIM6-TRIM34B2RNG4 842 aa9.36□□□□□ -0.91
SDCBP-205ENST00000447267 MAP3K7O43318 606 aa9.36□□□□□ -0.91
SDCBP-205ENST00000447267 WNT2BQ93097 391 aa9.36□□□□□ -0.91
SDCBP-205ENST00000447267 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
SDCBP-205ENST00000447267 CDHR5Q9HBB8 845 aa9.36□□□□□ -0.91
SDCBP-205ENST00000447267 TSKSQ9UJT2 592 aa9.36□□□□□ -0.91
SDCBP-205ENST00000447267 NCOA1Q15788 1441 aa9.36□□□□□ -0.91
SDCBP-205ENST00000447267 SEPT9Q9UHD8 586 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-205ENST00000447267 ARID3CA6NKF2 412 aa9.34□□□□□ -0.91
SDCBP-205ENST00000447267 TRIM52Q96A61 297 aa9.34□□□□□ -0.91
SDCBP-205ENST00000447267 PHLDB1Q86UU1 1377 aa9.34□□□□□ -0.91
SDCBP-205ENST00000447267 FANCAO15360 1455 aa9.34□□□□□ -0.91
SDCBP-205ENST00000447267 BCAMP50895 628 aa9.33□□□□□ -0.92
SDCBP-205ENST00000447267 TTC37Q6PGP7 1564 aa9.33□□□□□ -0.92
SDCBP-205ENST00000447267 ONECUT3O60422 494 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms