RNA–Protein interactions for RNA: ENST00000446015.6

AP1S3-208, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene AP1S3, Length 499 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-208ENST00000446015 SAMD7Q7Z3H4 446 aa8.58□□□□□ -1.04
AP1S3-208ENST00000446015 SULF1Q8IWU6 871 aa8.57□□□□□ -1.04
AP1S3-208ENST00000446015 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
AP1S3-208ENST00000446015 SWT1Q5T5J6 900 aaKnown RBP8.56□□□□□ -1.04
AP1S3-208ENST00000446015 C3orf80F5H4A9 247 aa8.55□□□□□ -1.04
AP1S3-208ENST00000446015 PPP4CP60510 307 aa8.55□□□□□ -1.04
AP1S3-208ENST00000446015 HPS5Q9UPZ3 1129 aa8.55□□□□□ -1.04
AP1S3-208ENST00000446015 RNF40O75150 1001 aa8.54□□□□□ -1.04
AP1S3-208ENST00000446015 CLCN1P35523 988 aa8.54□□□□□ -1.04
AP1S3-208ENST00000446015 BCAMP50895 628 aa8.54□□□□□ -1.04
AP1S3-208ENST00000446015 AK7Q96M32 723 aa8.54□□□□□ -1.04
AP1S3-208ENST00000446015 DAXXQ9UER7 740 aaPredicted RBP8.54□□□□□ -1.04
AP1S3-208ENST00000446015 PTPN5P54829 565 aa8.52□□□□□ -1.05
AP1S3-208ENST00000446015 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
AP1S3-208ENST00000446015 KMT5BQ4FZB7 885 aa8.52□□□□□ -1.05
AP1S3-208ENST00000446015 AMHR2Q16671 573 aa8.51□□□□□ -1.05
AP1S3-208ENST00000446015 GPCPD1Q9NPB8 672 aa8.51□□□□□ -1.05
AP1S3-208ENST00000446015 WBP1LQ9NX94 342 aa8.48□□□□□ -1.05
AP1S3-208ENST00000446015 TTLL12Q14166 644 aaPredicted RBP8.46□□□□□ -1.06
AP1S3-208ENST00000446015 DDX11L8A8MPP1 907 aa8.45□□□□□ -1.06
AP1S3-208ENST00000446015 CFHP08603 1231 aa8.45□□□□□ -1.06
AP1S3-208ENST00000446015 MDM2Q00987 491 aaPredicted RBP8.45□□□□□ -1.06
AP1S3-208ENST00000446015 RDH13Q8NBN7 331 aa8.45□□□□□ -1.06
AP1S3-208ENST00000446015 PHOX2BQ99453 314 aa8.45□□□□□ -1.06
AP1S3-208ENST00000446015 TRIM66O15016 1216 aa8.44□□□□□ -1.06
AP1S3-208ENST00000446015 ACTN4O43707 911 aaKnown RBP8.44□□□□□ -1.06
AP1S3-208ENST00000446015 GRIPAP1Q4V328 841 aa8.44□□□□□ -1.06
AP1S3-208ENST00000446015 IFFO2Q5TF58 517 aa8.44□□□□□ -1.06
AP1S3-208ENST00000446015 SLC24A3Q9HC58 644 aa8.44□□□□□ -1.06
AP1S3-208ENST00000446015 ITGBL1O95965 494 aaPredicted RBP8.43□□□□□ -1.06
AP1S3-208ENST00000446015 CD46P15529 392 aa8.42□□□□□ -1.06
AP1S3-208ENST00000446015 TMUB1Q9BVT8 246 aa8.42□□□□□ -1.06
AP1S3-208ENST00000446015 FAM217BQ9NTX9 383 aaPredicted RBP8.42□□□□□ -1.06
AP1S3-208ENST00000446015 USP46P62068 366 aa8.41□□□□□ -1.06
AP1S3-208ENST00000446015 DIXDC1Q155Q3 683 aa8.41□□□□□ -1.06
AP1S3-208ENST00000446015 IL21Q9HBE4 155 aa8.41□□□□□ -1.06
AP1S3-208ENST00000446015 PCDHB3Q9Y5E6 796 aa8.41□□□□□ -1.06
AP1S3-208ENST00000446015 SLC10A3P09131 477 aa8.4□□□□□ -1.06
AP1S3-208ENST00000446015 GCGRP47871 477 aa8.4□□□□□ -1.06
AP1S3-208ENST00000446015 APLP1P51693 650 aa8.4□□□□□ -1.06
AP1S3-208ENST00000446015 KCNC4Q03721 635 aa8.4□□□□□ -1.06
AP1S3-208ENST00000446015 PDE4DQ08499 809 aa8.4□□□□□ -1.06
AP1S3-208ENST00000446015 TPRNQ4KMQ1 711 aa8.39□□□□□ -1.07
AP1S3-208ENST00000446015 GIGYF2Q6Y7W6 1299 aaKnown RBP8.39□□□□□ -1.07
AP1S3-208ENST00000446015 PARP9Q8IXQ6 854 aa8.39□□□□□ -1.07
AP1S3-208ENST00000446015 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
AP1S3-208ENST00000446015 NR1I2O75469 434 aa8.38□□□□□ -1.07
AP1S3-208ENST00000446015 NLRP7Q8WX94 980 aa8.38□□□□□ -1.07
AP1S3-208ENST00000446015 SSTR3P32745 418 aaPredicted RBP8.37□□□□□ -1.07
AP1S3-208ENST00000446015 KDM4AO75164 1064 aa8.36□□□□□ -1.07
AP1S3-208ENST00000446015 ATP6V1AP38606 617 aa8.36□□□□□ -1.07
AP1S3-208ENST00000446015 MTRQ99707 1265 aa8.36□□□□□ -1.07
AP1S3-208ENST00000446015 NUTM1Q86Y26 1132 aa8.35□□□□□ -1.07
AP1S3-208ENST00000446015 TJAP1Q5JTD0 557 aa8.34□□□□□ -1.07
AP1S3-208ENST00000446015 Q3C1V9 767 aa8.33□□□□□ -1.08
AP1S3-208ENST00000446015 ZPR1O75312 459 aa8.32□□□□□ -1.08
AP1S3-208ENST00000446015 GGCXP38435 758 aa8.32□□□□□ -1.08
AP1S3-208ENST00000446015 FUT2Q10981 343 aa8.32□□□□□ -1.08
AP1S3-208ENST00000446015 DDRGK1Q96HY6 314 aa8.32□□□□□ -1.08
AP1S3-208ENST00000446015 SALL2Q9Y467 1007 aaPredicted RBP8.32□□□□□ -1.08
AP1S3-208ENST00000446015 GJA5P36382 358 aa8.31□□□□□ -1.08
AP1S3-208ENST00000446015 COPS2P61201 443 aa8.31□□□□□ -1.08
AP1S3-208ENST00000446015 BLOC1S3Q6QNY0 202 aa8.31□□□□□ -1.08
AP1S3-208ENST00000446015 BEGAINQ9BUH8 593 aa8.31□□□□□ -1.08
AP1S3-208ENST00000446015 REPIN1Q9BWE0 567 aaKnown RBP8.31□□□□□ -1.08
AP1S3-208ENST00000446015 MORN1Q5T089 497 aa8.3□□□□□ -1.08
AP1S3-208ENST00000446015 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
AP1S3-208ENST00000446015 HOXA2O43364 376 aa8.29□□□□□ -1.08
AP1S3-208ENST00000446015 RGS20O76081 388 aa8.29□□□□□ -1.08
AP1S3-208ENST00000446015 A0A0G2JS52 829 aa8.28□□□□□ -1.08
AP1S3-208ENST00000446015 FMNL1O95466 1100 aaPredicted RBP8.28□□□□□ -1.08
AP1S3-208ENST00000446015 MS4A1P11836 297 aa8.28□□□□□ -1.08
AP1S3-208ENST00000446015 ADH1BP00325 375 aa8.27□□□□□ -1.09
AP1S3-208ENST00000446015 SCUBE3Q8IX30 993 aa8.27□□□□□ -1.09
AP1S3-208ENST00000446015 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.09
AP1S3-208ENST00000446015 SPIRE2Q8WWL2 714 aa8.26□□□□□ -1.09
AP1S3-208ENST00000446015 NEUROD2Q15784 382 aa8.25□□□□□ -1.09
AP1S3-208ENST00000446015 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
AP1S3-208ENST00000446015 SPSB2Q99619 263 aa8.25□□□□□ -1.09
AP1S3-208ENST00000446015 SPDYE5A6NIY4 337 aa8.24□□□□□ -1.09
AP1S3-208ENST00000446015 FDX1P10109 184 aa8.24□□□□□ -1.09
AP1S3-208ENST00000446015 TBC1D2Q9BYX2 928 aa8.24□□□□□ -1.09
AP1S3-208ENST00000446015 SLC27A5Q9Y2P5 690 aa8.24□□□□□ -1.09
AP1S3-208ENST00000446015 TUSC1Q2TAM9 212 aa8.23□□□□□ -1.09
AP1S3-208ENST00000446015 MSS51Q4VC12 460 aa8.23□□□□□ -1.09
AP1S3-208ENST00000446015 ZNF516Q92618 1163 aa8.23□□□□□ -1.09
AP1S3-208ENST00000446015 SLC6A16Q9GZN6 736 aa8.22□□□□□ -1.09
AP1S3-208ENST00000446015 PRPF38BQ5VTL8 546 aaKnown RBP8.21□□□□□ -1.1
AP1S3-208ENST00000446015 BRICD5Q6PL45 260 aa8.21□□□□□ -1.1
AP1S3-208ENST00000446015 THAP11Q96EK4 314 aa8.21□□□□□ -1.1
AP1S3-208ENST00000446015 GPBP1L1Q9HC44 474 aaPredicted RBP8.21□□□□□ -1.1
AP1S3-208ENST00000446015 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.21□□□□□ -1.1
AP1S3-208ENST00000446015 SPTLC1O15269 473 aa8.2□□□□□ -1.1
AP1S3-208ENST00000446015 SH3D19Q5HYK7 790 aa8.2□□□□□ -1.1
AP1S3-208ENST00000446015 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
AP1S3-208ENST00000446015 RETREG3Q86VR2 466 aa8.2□□□□□ -1.1
AP1S3-208ENST00000446015 USB1Q9BQ65 265 aaKnown RBP8.2□□□□□ -1.1
AP1S3-208ENST00000446015 MOXD2PA6NHM9 499 aa8.19□□□□□ -1.1
AP1S3-208ENST00000446015 TLL1O43897 1013 aa8.19□□□□□ -1.1
AP1S3-208ENST00000446015 BRPF1P55201 1214 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms