RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 SETD5Q9C0A6 1442 aa28.12■■■□□ 2.09
HDAC4-203ENST00000445704 SLC26A8Q96RN1 970 aa28.08■■■□□ 2.09
HDAC4-203ENST00000445704 PLEKHG1Q9ULL1 1385 aa28.08■■■□□ 2.09
HDAC4-203ENST00000445704 SENP3Q9H4L4 574 aaPredicted RBP28.07■■■□□ 2.08
HDAC4-203ENST00000445704 PPP1R15AO75807 674 aaPredicted RBP28.06■■■□□ 2.08
HDAC4-203ENST00000445704 NUTM2DQ5VT03 806 aaPredicted RBP28.06■■■□□ 2.08
HDAC4-203ENST00000445704 FOXD1Q16676 465 aa28.05■■■□□ 2.08
HDAC4-203ENST00000445704 LRRC7Q96NW7 1537 aa28.05■■■□□ 2.08
HDAC4-203ENST00000445704 RAB3GAP2Q9H2M9 1393 aa28.05■■■□□ 2.08
HDAC4-203ENST00000445704 HDGFP51858 240 aaKnown RBP28.03■■■□□ 2.08
HDAC4-203ENST00000445704 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
HDAC4-203ENST00000445704 MPHOSPH9Q99550 1183 aa28.03■■■□□ 2.08
HDAC4-203ENST00000445704 BCANQ96GW7 911 aa28.01■■■□□ 2.07
HDAC4-203ENST00000445704 KIF1BO60333 1816 aa28.01■■■□□ 2.07
HDAC4-203ENST00000445704 UBAP1LF5GYI3 381 aa27.98■■■□□ 2.07
HDAC4-203ENST00000445704 ADAMTS13Q76LX8 1427 aa27.98■■■□□ 2.07
HDAC4-203ENST00000445704 NWD1Q149M9 1564 aa27.98■■■□□ 2.07
HDAC4-203ENST00000445704 NEXMIFQ5QGS0 1516 aa27.97■■■□□ 2.07
HDAC4-203ENST00000445704 ZNF326Q5BKZ1 582 aaKnown RBP27.97■■■□□ 2.07
HDAC4-203ENST00000445704 KCNA6P17658 529 aa27.95■■■□□ 2.06
HDAC4-203ENST00000445704 XIRP1Q702N8 1843 aaKnown RBP27.95■■■□□ 2.06
HDAC4-203ENST00000445704 ACIN1Q9UKV3 1341 aaKnown RBP27.94■■■□□ 2.06
HDAC4-203ENST00000445704 ALKQ9UM73 1620 aa27.94■■■□□ 2.06
HDAC4-203ENST00000445704 NRXN3Q9Y4C0 1643 aa27.93■■■□□ 2.06
HDAC4-203ENST00000445704 DIP2AQ14689 1571 aa27.93■■■□□ 2.06
HDAC4-203ENST00000445704 TBX22Q9Y458 520 aa27.92■■■□□ 2.06
HDAC4-203ENST00000445704 CHD2O14647 1828 aaKnown RBP27.91■■■□□ 2.06
HDAC4-203ENST00000445704 SETBP1Q9Y6X0 1596 aa27.9■■■□□ 2.06
HDAC4-203ENST00000445704 NKTRP30414 1462 aaKnown RBP27.89■■■□□ 2.06
HDAC4-203ENST00000445704 CCDC144AA2RUR9 1427 aa27.89■■■□□ 2.06
HDAC4-203ENST00000445704 TMEM94Q12767 1356 aa27.86■■■□□ 2.05
HDAC4-203ENST00000445704 TOM1O60784 492 aa27.86■■■□□ 2.05
HDAC4-203ENST00000445704 RBM33Q96EV2 1170 aaKnown RBP27.84■■■□□ 2.05
HDAC4-203ENST00000445704 PPLO60437 1756 aa27.83■■■□□ 2.05
HDAC4-203ENST00000445704 PROSER2Q86WR7 435 aaPredicted RBP27.83■■■□□ 2.05
HDAC4-203ENST00000445704 PIK3R4Q99570 1358 aa27.83■■■□□ 2.05
HDAC4-203ENST00000445704 SPATA31E1Q6ZUB1 1445 aa27.83■■■□□ 2.05
HDAC4-203ENST00000445704 PTPRUQ92729 1446 aa27.83■■■□□ 2.05
HDAC4-203ENST00000445704 PIP4K2BP78356 416 aa27.82■■■□□ 2.04
HDAC4-203ENST00000445704 HRCP23327 699 aa27.81■■■□□ 2.04
HDAC4-203ENST00000445704 RPGRIP1LQ68CZ1 1315 aa27.81■■■□□ 2.04
HDAC4-203ENST00000445704 SCAF1Q9H7N4 1312 aaKnown RBP27.8■■■□□ 2.04
HDAC4-203ENST00000445704 METP08581 1390 aa27.77■■■□□ 2.04
HDAC4-203ENST00000445704 XRN1Q8IZH2 1706 aaKnown RBP27.76■■■□□ 2.03
HDAC4-203ENST00000445704 VGFO15240 615 aaPredicted RBP27.76■■■□□ 2.03
HDAC4-203ENST00000445704 SETD1AO15047 1707 aaKnown RBP27.75■■■□□ 2.03
HDAC4-203ENST00000445704 IFT172Q9UG01 1749 aa27.75■■■□□ 2.03
HDAC4-203ENST00000445704 RGL3Q3MIN7 710 aa27.75■■■□□ 2.03
HDAC4-203ENST00000445704 AMOTL2Q9Y2J4 779 aa27.74■■■□□ 2.03
HDAC4-203ENST00000445704 ANKRD30BQ9BXX2 1392 aa27.73■■■□□ 2.03
HDAC4-203ENST00000445704 ADGRF5Q8IZF2 1346 aa27.69■■■□□ 2.02
HDAC4-203ENST00000445704 HSPA1LP34931 641 aa27.68■■■□□ 2.02
HDAC4-203ENST00000445704 MSH6P52701 1360 aa27.68■■■□□ 2.02
HDAC4-203ENST00000445704 NCOA3Q9Y6Q9 1424 aa27.67■■■□□ 2.02
HDAC4-203ENST00000445704 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.61■■■□□ 2.01
HDAC4-203ENST00000445704 PIK3C2GO75747 1445 aa27.6■■■□□ 2.01
HDAC4-203ENST00000445704 C14orf37Q86TY3 774 aa27.6■■■□□ 2.01
HDAC4-203ENST00000445704 FAM135BQ49AJ0 1406 aa27.59■■■□□ 2.01
HDAC4-203ENST00000445704 ROBO1Q9Y6N7 1651 aa27.59■■■□□ 2.01
HDAC4-203ENST00000445704 MYOM2P54296 1465 aa27.58■■■□□ 2.01
HDAC4-203ENST00000445704 ASXL1Q8IXJ9 1541 aa27.57■■■□□ 2
HDAC4-203ENST00000445704 PRAG1Q86YV5 1406 aa27.57■■■□□ 2
HDAC4-203ENST00000445704 NRXN1Q9ULB1 1477 aa27.57■■■□□ 2
HDAC4-203ENST00000445704 C19orf44Q9H6X5 657 aa27.56■■■□□ 2
HDAC4-203ENST00000445704 PTCH1Q13635 1447 aa27.56■■■□□ 2
HDAC4-203ENST00000445704 ROBO2Q9HCK4 1378 aa27.55■■■□□ 2
HDAC4-203ENST00000445704 NALCNQ8IZF0 1738 aa27.54■■■□□ 2
HDAC4-203ENST00000445704 SLAIN2Q9P270 581 aa27.54■■■□□ 2
HDAC4-203ENST00000445704 DCCP43146 1447 aa27.51■■□□□ 1.99
HDAC4-203ENST00000445704 ADGRL3Q9HAR2 1447 aa27.51■■□□□ 1.99
HDAC4-203ENST00000445704 CADPS2Q86UW7 1296 aa27.5■■□□□ 1.99
HDAC4-203ENST00000445704 ATF3P18847 181 aa27.49■■□□□ 1.99
HDAC4-203ENST00000445704 TMEM132EQ6IEE7 984 aa27.48■■□□□ 1.99
HDAC4-203ENST00000445704 C14orf93Q9H972 538 aaKnown RBP27.47■■□□□ 1.99
HDAC4-203ENST00000445704 LAMC1P11047 1609 aa27.47■■□□□ 1.99
HDAC4-203ENST00000445704 LRPPRCP42704 1394 aaKnown RBP27.47■■□□□ 1.99
HDAC4-203ENST00000445704 DHX57Q6P158 1386 aaKnown RBP27.47■■□□□ 1.99
HDAC4-203ENST00000445704 TECPR2O15040 1411 aa27.46■■□□□ 1.99
HDAC4-203ENST00000445704 KNDC1Q76NI1 1749 aa27.45■■□□□ 1.99
HDAC4-203ENST00000445704 CFAP70Q5T0N1 1121 aa27.45■■□□□ 1.98
HDAC4-203ENST00000445704 MST1RQ04912 1400 aa27.44■■□□□ 1.98
HDAC4-203ENST00000445704 TRIM26Q12899 539 aaPredicted RBP27.44■■□□□ 1.98
HDAC4-203ENST00000445704 DCAF11Q8TEB1 546 aa27.44■■□□□ 1.98
HDAC4-203ENST00000445704 STK26Q9P289 416 aa27.44■■□□□ 1.98
HDAC4-203ENST00000445704 KDM2AQ9Y2K7 1162 aa27.43■■□□□ 1.98
HDAC4-203ENST00000445704 YTHDC2Q9H6S0 1430 aaKnown RBP27.42■■□□□ 1.98
HDAC4-203ENST00000445704 ABCC11Q96J66 1382 aa27.42■■□□□ 1.98
HDAC4-203ENST00000445704 DISP3Q9P2K9 1392 aa27.41■■□□□ 1.98
HDAC4-203ENST00000445704 MED1Q15648 1581 aaPredicted RBP27.4■■□□□ 1.98
HDAC4-203ENST00000445704 PHLPP1O60346 1717 aa27.4■■□□□ 1.98
HDAC4-203ENST00000445704 PLEKHH1Q9ULM0 1364 aa27.38■■□□□ 1.97
HDAC4-203ENST00000445704 WAPLQ7Z5K2 1190 aa27.38■■□□□ 1.97
HDAC4-203ENST00000445704 ADGRB1O14514 1584 aa27.37■■□□□ 1.97
HDAC4-203ENST00000445704 BRINP3Q76B58 766 aa27.37■■□□□ 1.97
HDAC4-203ENST00000445704 COL16A1Q07092 1604 aaPredicted RBP27.36■■□□□ 1.97
HDAC4-203ENST00000445704 AHDC1Q5TGY3 1603 aaPredicted RBP27.36■■□□□ 1.97
HDAC4-203ENST00000445704 STAC3Q96MF2 364 aa27.34■■□□□ 1.97
HDAC4-203ENST00000445704 CDC42BPGQ6DT37 1551 aa27.34■■□□□ 1.97
HDAC4-203ENST00000445704 C1orf167Q5SNV9 1468 aa27.33■■□□□ 1.97
HDAC4-203ENST00000445704 SIN3AQ96ST3 1273 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms