RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CFAP70Q5T0N1 1121 aa20.87■□□□□ 0.93
TCOF1-206ENST00000445265 DZIP1LQ8IYY4 767 aaKnown RBP20.87■□□□□ 0.93
TCOF1-206ENST00000445265 SCAPERQ9BY12 1400 aa20.87■□□□□ 0.93
TCOF1-206ENST00000445265 SOX12O15370 315 aa20.87■□□□□ 0.93
TCOF1-206ENST00000445265 ARHGEF11O15085 1522 aa20.86■□□□□ 0.93
TCOF1-206ENST00000445265 TCOF1Q13428 1488 aaKnown RBP20.86■□□□□ 0.93
TCOF1-206ENST00000445265 MSH5O43196 834 aa20.84■□□□□ 0.93
TCOF1-206ENST00000445265 APBB1O00213 710 aa20.84■□□□□ 0.93
TCOF1-206ENST00000445265 OS9Q13438 667 aaPredicted RBP20.84■□□□□ 0.93
TCOF1-206ENST00000445265 PDE3AQ14432 1141 aa20.83■□□□□ 0.93
TCOF1-206ENST00000445265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.83■□□□□ 0.93
TCOF1-206ENST00000445265 PLEKHG5O94827 1062 aa20.82■□□□□ 0.92
TCOF1-206ENST00000445265 HMMRO75330 724 aa20.82■□□□□ 0.92
TCOF1-206ENST00000445265 PANK1Q8TE04 598 aa20.82■□□□□ 0.92
TCOF1-206ENST00000445265 KIF14Q15058 1648 aa20.81■□□□□ 0.92
TCOF1-206ENST00000445265 DIAPH1O60610 1272 aaKnown RBP20.81■□□□□ 0.92
TCOF1-206ENST00000445265 NFKBIBQ15653 356 aa20.81■□□□□ 0.92
TCOF1-206ENST00000445265 DDX11L8A8MPP1 907 aa20.8■□□□□ 0.92
TCOF1-206ENST00000445265 TCP11L2Q8N4U5 519 aa20.8■□□□□ 0.92
TCOF1-206ENST00000445265 MINK1Q8N4C8 1332 aaPredicted RBP20.79■□□□□ 0.92
TCOF1-206ENST00000445265 DNTTIP2Q5QJE6 756 aaKnown RBP20.79■□□□□ 0.92
TCOF1-206ENST00000445265 MSNP26038 577 aaKnown RBP20.78■□□□□ 0.92
TCOF1-206ENST00000445265 GPATCH8Q9UKJ3 1502 aaKnown RBP20.78■□□□□ 0.92
TCOF1-206ENST00000445265 MTHFSP49914 203 aa20.78■□□□□ 0.92
TCOF1-206ENST00000445265 RIPK4P57078 832 aa20.78■□□□□ 0.92
TCOF1-206ENST00000445265 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
TCOF1-206ENST00000445265 KIF16BQ96L93 1317 aa20.77■□□□□ 0.92
TCOF1-206ENST00000445265 ANKRD45Q5TZF3 282 aa20.76■□□□□ 0.91
TCOF1-206ENST00000445265 DNAJC5BQ9UF47 199 aa20.76■□□□□ 0.91
TCOF1-206ENST00000445265 NINLQ9Y2I6 1382 aa20.76■□□□□ 0.91
TCOF1-206ENST00000445265 KCNJ4P48050 445 aa20.75■□□□□ 0.91
TCOF1-206ENST00000445265 CHMP4AQ9BY43 222 aa20.75■□□□□ 0.91
TCOF1-206ENST00000445265 TPRNQ4KMQ1 711 aa20.74■□□□□ 0.91
TCOF1-206ENST00000445265 TMEM132EQ6IEE7 984 aa20.74■□□□□ 0.91
TCOF1-206ENST00000445265 ELL2O00472 640 aaPredicted RBP20.73■□□□□ 0.91
TCOF1-206ENST00000445265 CHMP5Q9NZZ3 219 aa20.73■□□□□ 0.91
TCOF1-206ENST00000445265 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
TCOF1-206ENST00000445265 COG3Q96JB2 828 aa20.73■□□□□ 0.91
TCOF1-206ENST00000445265 BCAR3O75815 825 aa20.72■□□□□ 0.91
TCOF1-206ENST00000445265 RALGAPBQ86X10 1494 aa20.72■□□□□ 0.91
TCOF1-206ENST00000445265 RAPGEF6Q8TEU7 1601 aa20.71■□□□□ 0.91
TCOF1-206ENST00000445265 SLFN5Q08AF3 891 aa20.71■□□□□ 0.91
TCOF1-206ENST00000445265 NUP153P49790 1475 aaKnown RBP20.71■□□□□ 0.91
TCOF1-206ENST00000445265 LMOD2Q6P5Q4 547 aa20.7■□□□□ 0.9
TCOF1-206ENST00000445265 KIAA1211Q6ZU35 1233 aa20.7■□□□□ 0.9
TCOF1-206ENST00000445265 ST18O60284 1047 aa20.7■□□□□ 0.9
TCOF1-206ENST00000445265 API5Q9BZZ5 524 aaKnown RBP20.7■□□□□ 0.9
TCOF1-206ENST00000445265 GGNBP2Q9H3C7 697 aa20.69■□□□□ 0.9
TCOF1-206ENST00000445265 PLCB2Q00722 1185 aa20.69■□□□□ 0.9
TCOF1-206ENST00000445265 SKOR2Q2VWA4 1001 aaPredicted RBP20.69■□□□□ 0.9
TCOF1-206ENST00000445265 WDR63Q8IWG1 891 aa20.69■□□□□ 0.9
TCOF1-206ENST00000445265 SLC12A5Q9H2X9 1139 aa20.69■□□□□ 0.9
TCOF1-206ENST00000445265 C22orf23Q9BZE7 217 aa20.68■□□□□ 0.9
TCOF1-206ENST00000445265 CABP2Q9NPB3 220 aa20.68■□□□□ 0.9
TCOF1-206ENST00000445265 ZRSR1Q15695 479 aaKnown RBP20.68■□□□□ 0.9
TCOF1-206ENST00000445265 SLC4A10Q6U841 1118 aa20.68■□□□□ 0.9
TCOF1-206ENST00000445265 FOXD4L1Q9NU39 408 aa20.67■□□□□ 0.9
TCOF1-206ENST00000445265 GNAI1P63096 354 aa20.66■□□□□ 0.9
TCOF1-206ENST00000445265 SYAP1Q96A49 352 aaPredicted RBP20.66■□□□□ 0.9
TCOF1-206ENST00000445265 WDR62O43379 1518 aa20.66■□□□□ 0.9
TCOF1-206ENST00000445265 ITSN2Q9NZM3 1697 aa20.66■□□□□ 0.9
TCOF1-206ENST00000445265 GOLGA6L4A6NEF3 574 aa20.65■□□□□ 0.9
TCOF1-206ENST00000445265 CT47B1P0C2W7 299 aaPredicted RBP20.65■□□□□ 0.9
TCOF1-206ENST00000445265 FGD1P98174 961 aa20.65■□□□□ 0.9
TCOF1-206ENST00000445265 PDZRN3Q9UPQ7 1066 aa20.65■□□□□ 0.9
TCOF1-206ENST00000445265 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.64■□□□□ 0.89
TCOF1-206ENST00000445265 TRIM6-TRIM34B2RNG4 842 aa20.63■□□□□ 0.89
TCOF1-206ENST00000445265 AMPHP49418 695 aa20.62■□□□□ 0.89
TCOF1-206ENST00000445265 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
TCOF1-206ENST00000445265 LNPKQ9C0E8 428 aa20.62■□□□□ 0.89
TCOF1-206ENST00000445265 NGDNQ8NEJ9 315 aaKnown RBP20.62■□□□□ 0.89
TCOF1-206ENST00000445265 HDAC5Q9UQL6 1122 aa20.62■□□□□ 0.89
TCOF1-206ENST00000445265 RPGRIP1LQ68CZ1 1315 aa20.61■□□□□ 0.89
TCOF1-206ENST00000445265 EID1Q9Y6B2 187 aa20.61■□□□□ 0.89
TCOF1-206ENST00000445265 EXOSC9Q06265 439 aaKnown RBP20.61■□□□□ 0.89
TCOF1-206ENST00000445265 RSPH6AQ9H0K4 717 aa20.61■□□□□ 0.89
TCOF1-206ENST00000445265 WWC1Q8IX03 1113 aa20.6■□□□□ 0.89
TCOF1-206ENST00000445265 DDX49Q9Y6V7 483 aaKnown RBP20.59■□□□□ 0.89
TCOF1-206ENST00000445265 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
TCOF1-206ENST00000445265 FRAT2O75474 233 aaPredicted RBP20.59■□□□□ 0.89
TCOF1-206ENST00000445265 C20orf194Q5TEA3 1177 aa20.59■□□□□ 0.89
TCOF1-206ENST00000445265 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
TCOF1-206ENST00000445265 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
TCOF1-206ENST00000445265 SAMD9Q5K651 1589 aa20.58■□□□□ 0.88
TCOF1-206ENST00000445265 REC8O95072 547 aa20.58■□□□□ 0.88
TCOF1-206ENST00000445265 KIAA0556O60303 1618 aa20.58■□□□□ 0.88
TCOF1-206ENST00000445265 DUSP27Q5VZP5 1158 aa20.57■□□□□ 0.88
TCOF1-206ENST00000445265 PARD3Q8TEW0 1356 aa20.57■□□□□ 0.88
TCOF1-206ENST00000445265 SCAF11Q99590 1463 aaKnown RBP20.56■□□□□ 0.88
TCOF1-206ENST00000445265 DHX29Q7Z478 1369 aaKnown RBP20.56■□□□□ 0.88
TCOF1-206ENST00000445265 NKTRP30414 1462 aaKnown RBP20.56■□□□□ 0.88
TCOF1-206ENST00000445265 DNMT1P26358 1616 aaKnown RBP20.56■□□□□ 0.88
TCOF1-206ENST00000445265 ATP10BO94823 1461 aa20.56■□□□□ 0.88
TCOF1-206ENST00000445265 ARHGEF12Q9NZN5 1544 aa20.56■□□□□ 0.88
TCOF1-206ENST00000445265 NUTM2FA1L443 756 aa20.55■□□□□ 0.88
TCOF1-206ENST00000445265 MVPQ14764 893 aaKnown RBP20.55■□□□□ 0.88
TCOF1-206ENST00000445265 HMOX1P09601 288 aa20.55■□□□□ 0.88
TCOF1-206ENST00000445265 NSD3Q9BZ95 1437 aa20.55■□□□□ 0.88
TCOF1-206ENST00000445265 PRAG1Q86YV5 1406 aa20.55■□□□□ 0.88
TCOF1-206ENST00000445265 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms