RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 AMER1Q5JTC6 1135 aaPredicted RBP3.92□□□□□ -1.78
LINC00393-201ENST00000443621 CARD11Q9BXL7 1154 aa3.92□□□□□ -1.78
LINC00393-201ENST00000443621 DAXXQ9UER7 740 aaPredicted RBP3.92□□□□□ -1.78
LINC00393-201ENST00000443621 MYT1LQ9UL68 1186 aa3.92□□□□□ -1.78
LINC00393-201ENST00000443621 PIK3C2GO75747 1445 aa3.92□□□□□ -1.78
LINC00393-201ENST00000443621 YEATS2Q9ULM3 1422 aa3.92□□□□□ -1.78
LINC00393-201ENST00000443621 NLRP1Q9C000 1473 aa3.92□□□□□ -1.78
LINC00393-201ENST00000443621 TMEM131LA2VDJ0 1609 aa3.92□□□□□ -1.78
LINC00393-201ENST00000443621 NINLQ9Y2I6 1382 aa3.91□□□□□ -1.78
LINC00393-201ENST00000443621 TSPOAP1O95153 1857 aa3.91□□□□□ -1.78
LINC00393-201ENST00000443621 TMF1P82094 1093 aa3.91□□□□□ -1.78
LINC00393-201ENST00000443621 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.91□□□□□ -1.78
LINC00393-201ENST00000443621 SIRT1Q96EB6 747 aa3.91□□□□□ -1.78
LINC00393-201ENST00000443621 SIGLEC1Q9BZZ2 1709 aa3.91□□□□□ -1.78
LINC00393-201ENST00000443621 DNAJC5Q9H3Z4 198 aa3.91□□□□□ -1.78
LINC00393-201ENST00000443621 C14orf93Q9H972 538 aaKnown RBP3.91□□□□□ -1.78
LINC00393-201ENST00000443621 ERVK-7P63135 1459 aa3.91□□□□□ -1.78
LINC00393-201ENST00000443621 COL17A1Q9UMD9 1497 aaPredicted RBP3.91□□□□□ -1.78
LINC00393-201ENST00000443621 NEXMIFQ5QGS0 1516 aa3.9□□□□□ -1.78
LINC00393-201ENST00000443621 RALBP1Q15311 655 aa3.9□□□□□ -1.79
LINC00393-201ENST00000443621 NCBP3Q53F19 620 aaKnown RBP3.9□□□□□ -1.79
LINC00393-201ENST00000443621 GGT6Q6P531 493 aa3.9□□□□□ -1.79
LINC00393-201ENST00000443621 TESK2Q96S53 571 aa3.9□□□□□ -1.79
LINC00393-201ENST00000443621 KIF7Q2M1P5 1343 aa3.9□□□□□ -1.79
LINC00393-201ENST00000443621 DLC1Q96QB1 1528 aa3.9□□□□□ -1.79
LINC00393-201ENST00000443621 ZMYM3Q14202 1370 aa3.89□□□□□ -1.79
LINC00393-201ENST00000443621 ADGRB1O14514 1584 aa3.89□□□□□ -1.79
LINC00393-201ENST00000443621 ST20-MTHFSA0A0A6YYL1 179 aa3.89□□□□□ -1.79
LINC00393-201ENST00000443621 DDX10Q13206 875 aaKnown RBP3.89□□□□□ -1.79
LINC00393-201ENST00000443621 IDI1Q13907 227 aa3.89□□□□□ -1.79
LINC00393-201ENST00000443621 MIER1Q8N108 512 aa3.89□□□□□ -1.79
LINC00393-201ENST00000443621 ESF1Q9H501 851 aaKnown RBP3.89□□□□□ -1.79
LINC00393-201ENST00000443621 PRKRIP1Q9H875 184 aaPredicted RBP3.89□□□□□ -1.79
LINC00393-201ENST00000443621 CLTCQ00610 1675 aaKnown RBP3.89□□□□□ -1.79
LINC00393-201ENST00000443621 SETD1BQ9UPS6 1966 aaKnown RBP3.89□□□□□ -1.79
LINC00393-201ENST00000443621 TECPR2O15040 1411 aa3.88□□□□□ -1.79
LINC00393-201ENST00000443621 A2ML1A8K2U0 1454 aa3.88□□□□□ -1.79
LINC00393-201ENST00000443621 RGL3Q3MIN7 710 aa3.88□□□□□ -1.79
LINC00393-201ENST00000443621 NGEFQ8N5V2 710 aa3.88□□□□□ -1.79
LINC00393-201ENST00000443621 SLIT1O75093 1534 aa3.88□□□□□ -1.79
LINC00393-201ENST00000443621 DIP2AQ14689 1571 aa3.88□□□□□ -1.79
LINC00393-201ENST00000443621 BRD4O60885 1362 aaPredicted RBP3.88□□□□□ -1.79
LINC00393-201ENST00000443621 USP32Q8NFA0 1604 aa3.88□□□□□ -1.79
LINC00393-201ENST00000443621 ABCC11Q96J66 1382 aa3.88□□□□□ -1.79
LINC00393-201ENST00000443621 PIK3R4Q99570 1358 aa3.88□□□□□ -1.79
LINC00393-201ENST00000443621 FAM135BQ49AJ0 1406 aa3.87□□□□□ -1.79
LINC00393-201ENST00000443621 KNDC1Q76NI1 1749 aa3.87□□□□□ -1.79
LINC00393-201ENST00000443621 ARHGAP23Q9P227 1491 aa3.87□□□□□ -1.79
LINC00393-201ENST00000443621 PER1O15534 1290 aaPredicted RBP3.87□□□□□ -1.79
LINC00393-201ENST00000443621 RTN4Q9NQC3 1192 aaKnown RBP3.87□□□□□ -1.79
LINC00393-201ENST00000443621 KDM2AQ9Y2K7 1162 aa3.87□□□□□ -1.79
LINC00393-201ENST00000443621 NSD2O96028 1365 aa3.87□□□□□ -1.79
LINC00393-201ENST00000443621 UBR1Q8IWV7 1749 aa3.87□□□□□ -1.79
LINC00393-201ENST00000443621 ARHGEF28Q8N1W1 1705 aaKnown RBP3.87□□□□□ -1.79
LINC00393-201ENST00000443621 C11orf95C9JLR9 678 aaPredicted RBP3.86□□□□□ -1.79
LINC00393-201ENST00000443621 NBPF1Q3BBV0 1214 aa3.86□□□□□ -1.79
LINC00393-201ENST00000443621 C3P01024 1663 aa3.86□□□□□ -1.79
LINC00393-201ENST00000443621 ADGRF5Q8IZF2 1346 aa3.86□□□□□ -1.79
LINC00393-201ENST00000443621 CENPJQ9HC77 1338 aaPredicted RBP3.86□□□□□ -1.79
LINC00393-201ENST00000443621 SETD1AO15047 1707 aaKnown RBP3.86□□□□□ -1.79
LINC00393-201ENST00000443621 PARD3Q8TEW0 1356 aa3.86□□□□□ -1.79
LINC00393-201ENST00000443621 TNRQ92752 1358 aa3.86□□□□□ -1.79
LINC00393-201ENST00000443621 TMEM2Q9UHN6 1383 aa3.86□□□□□ -1.79
LINC00393-201ENST00000443621 FER1L4A9Z1Z3 1794 aa3.86□□□□□ -1.79
LINC00393-201ENST00000443621 MED14O60244 1454 aa3.86□□□□□ -1.79
LINC00393-201ENST00000443621 CFAP65Q6ZU64 1925 aaKnown RBP3.85□□□□□ -1.79
LINC00393-201ENST00000443621 ALKQ9UM73 1620 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 ZNF142P52746 1687 aaPredicted RBP3.85□□□□□ -1.79
LINC00393-201ENST00000443621 ADAMTSL3P82987 1691 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 QRICH2Q9H0J4 1663 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 ZNF326Q5BKZ1 582 aaKnown RBP3.85□□□□□ -1.79
LINC00393-201ENST00000443621 ERICH6BQ5W0A0 696 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 NLRP13Q86W25 1043 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 THEMISQ8N1K5 641 aaPredicted RBP3.85□□□□□ -1.79
LINC00393-201ENST00000443621 MYO5BQ9ULV0 1848 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 EVC2Q86UK5 1308 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 MYBBP1AQ9BQG0 1328 aaKnown RBP3.85□□□□□ -1.79
LINC00393-201ENST00000443621 LRPPRCP42704 1394 aaKnown RBP3.85□□□□□ -1.79
LINC00393-201ENST00000443621 ATAD2Q6PL18 1390 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 PLEKHG1Q9ULL1 1385 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 YTHDC2Q9H6S0 1430 aaKnown RBP3.85□□□□□ -1.79
LINC00393-201ENST00000443621 RIMS2Q9UQ26 1411 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 ASXL1Q8IXJ9 1541 aa3.85□□□□□ -1.79
LINC00393-201ENST00000443621 MYOM1P52179 1685 aa3.84□□□□□ -1.79
LINC00393-201ENST00000443621 CFAP70Q5T0N1 1121 aa3.84□□□□□ -1.79
LINC00393-201ENST00000443621 PLPPR3Q6T4P5 718 aa3.84□□□□□ -1.79
LINC00393-201ENST00000443621 STAG3Q9UJ98 1225 aa3.84□□□□□ -1.79
LINC00393-201ENST00000443621 TBX22Q9Y458 520 aa3.84□□□□□ -1.79
LINC00393-201ENST00000443621 DISP3Q9P2K9 1392 aa3.84□□□□□ -1.79
LINC00393-201ENST00000443621 PTPRMP28827 1452 aa3.84□□□□□ -1.8
LINC00393-201ENST00000443621 CPS1P31327 1500 aa3.84□□□□□ -1.8
LINC00393-201ENST00000443621 ADGRB2O60241 1585 aa3.84□□□□□ -1.8
LINC00393-201ENST00000443621 PDE3BQ13370 1112 aa3.83□□□□□ -1.8
LINC00393-201ENST00000443621 KNSTRNQ9Y448 316 aa3.83□□□□□ -1.8
LINC00393-201ENST00000443621 EID1Q9Y6B2 187 aa3.83□□□□□ -1.8
LINC00393-201ENST00000443621 ZBED9Q6R2W3 1325 aa3.83□□□□□ -1.8
LINC00393-201ENST00000443621 SCAF1Q9H7N4 1312 aaKnown RBP3.83□□□□□ -1.8
LINC00393-201ENST00000443621 ANKRD36BQ8N2N9 1353 aa3.83□□□□□ -1.8
LINC00393-201ENST00000443621 PTCH1Q13635 1447 aa3.83□□□□□ -1.8
LINC00393-201ENST00000443621 ATP7BP35670 1465 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms